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The map label for this gene is fimT

Identifier: 161869819

GI number: 161869819

Start: 852732

End: 853445

Strand: Direct

Name: fimT

Synonym: NMCC_0848

Alternate gene names: NA

Gene position: 852732-853445 (Clockwise)

Preceding gene: 161869818

Following gene: 161869820

Centisome position: 39.6

GC content: 46.64

Gene sequence:

>714_bases
TTGAATTTAATCCACGATACATTACCAGTTAACGTCCTATTGCTTATGTGTACACGAAAACAACAAGGTTTCACGCTAAC
AGAGCTGCTCATCGTGATGGTCATTGCAGCCATTATGGCGATGATAGCCCTCCCCAATATGAGCCAATGGATTGCATCGC
GCCGCATTGCCAGTCACGCGGAGCGGATTGCCAACCTTTTGCGTTTCTCCAGGGGAGAAGCCGTCCGGCTCAATCTTCCT
GTCTATATCTGTCCTGTTCAAGTTAAAAAAGGCGGTGCGCCCAACAATAAATGTGACTCCGGCAAGAAGGGGCAGGGAAT
GTTGGCTTTTGGCGATAAGAATGGCAATAAGACATATGACGGCGATACGGTGGATGTTCTCCTCCGCAGTGTGGTATTGA
ATGATGATATCAATGATAAGCGGATTAATTATGCCTTCAACCATATCGCTTTCGGTCAGACTCAGCCGACCGCTGACCGT
GTTGTTTGGACGTTCAATCAAAACGGGACGTTCGGTTATACGAATAACCAGCATCTTACAAAACAATCCAGCTTTTCTTA
TTCCGACGGTTATATTCAAATCGTGCTGACAGATGCGAGAGCAGTTTCAGATGCCGATAAGAAATTCCGTTCGGCGGTGG
TTTTGATTGACAGCAGCGGCAGGGTTGAGGTTTGTCCTAGAAACGATAGGCGTACCGTATGCCAATATAAATGA

Upstream 100 bases:

>100_bases
GCCGCAGACCGTACAAATAGTACGGAACCGATTCACTTGGTGCTTGAGCACCTTAGAGAATCGTTCTCTTTGAGCTAAGG
CGAGGTAACGCCGTACTGGT

Downstream 100 bases:

>100_bases
TTGTTTTAGTCGGTTTGGGAAATAAAAAAATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCCGGTATGGCG
CTGATAGAAGTCTTGGTCGC

Product: fimbrial protein FimT

Products: NA

Alternate protein names: Prepilin-Type N- Cleavage/Methylation Domain Protein; Type IV Fimbrial Biogenesis Protein FimT

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNLIHDTLPVNVLLLMCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHAERIANLLRFSRGEAVRLNLP
VYICPVQVKKGGAPNNKCDSGKKGQGMLAFGDKNGNKTYDGDTVDVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTADR
VVWTFNQNGTFGYTNNQHLTKQSSFSYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTVCQYK

Sequences:

>Translated_237_residues
MNLIHDTLPVNVLLLMCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHAERIANLLRFSRGEAVRLNLP
VYICPVQVKKGGAPNNKCDSGKKGQGMLAFGDKNGNKTYDGDTVDVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTADR
VVWTFNQNGTFGYTNNQHLTKQSSFSYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTVCQYK
>Mature_237_residues
MNLIHDTLPVNVLLLMCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHAERIANLLRFSRGEAVRLNLP
VYICPVQVKKGGAPNNKCDSGKKGQGMLAFGDKNGNKTYDGDTVDVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTADR
VVWTFNQNGTFGYTNNQHLTKQSSFSYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTVCQYK

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26447; Mature: 26447

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIHDTLPVNVLLLMCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHA
CCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ERIANLLRFSRGEAVRLNLPVYICPVQVKKGGAPNNKCDSGKKGQGMLAFGDKNGNKTYD
HHHHHHHHHCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
GDTVDVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYTNNQHLT
CCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCCC
KQSSFSYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTVCQYK
CCCCCCCCCCEEEEEEECCHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNLIHDTLPVNVLLLMCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHA
CCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ERIANLLRFSRGEAVRLNLPVYICPVQVKKGGAPNNKCDSGKKGQGMLAFGDKNGNKTYD
HHHHHHHHHCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
GDTVDVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYTNNQHLT
CCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCCC
KQSSFSYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTVCQYK
CCCCCCCCCCEEEEEEECCHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA