| Definition | Neisseria meningitidis 053442, complete genome. |
|---|---|
| Accession | NC_010120 |
| Length | 2,153,416 |
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The map label for this gene is 161869770
Identifier: 161869770
GI number: 161869770
Start: 799168
End: 800088
Strand: Direct
Name: 161869770
Synonym: NMCC_0791
Alternate gene names: NA
Gene position: 799168-800088 (Clockwise)
Preceding gene: 161869769
Following gene: 161871030
Centisome position: 37.11
GC content: 51.68
Gene sequence:
>921_bases ATGGCAGAACTGTACCAAACCACCAAACAAAATATCAGCAAACACATTAAAACCATTCTTGCAGAGCAAGAATTGGAAGA GAAGGCAACTGTCAACTTCCAGTTGACAGTTCAAAATGAAAACGGGCGCAAGGTAAACCGCAAAATCGCCCATTATTCCC TGCCCATGATTATTGCCGTCGGCTACCGCGTCCGTTCCGCGCGGGGCATCCAATTCCGCCAATGGGCAACCGAACGGCTG GACGAATATCTGACCAAAGGCTTTGCCATAGACGACGAACGCCTGAAAGGCACAGGCGGCGGCGACTATTGGAAAGAACT GCTCAACCGCATTCGCGACATCCGCAGCAGCGAAAAAGCCCTATACCGGCAAGTGCTTGATTTATATGCCACCAGCCAAG ACTACAACCCCAAAAGCAGCGAAAGCCAAACCTTTTTTGCCGCCGTTCAAAACAAACTGCACTATGCCGCCAGCCGGCAA ACCGTAGCTGAGCTGATATACAGCCGTGCCGACAGCAGCAAAGACTTTATGGGGCTGACCACCTTTCAAGGCGCAATCCC CACGCTGAATGAAGCCAAAATCGCCAAAAACTATCTGACCGAAGACGAACTGTTCCGCCTGAACCGTCTGGTTTCCGCCT TCTTCGACCTGGCGGAAATCAAAGCGCAGGAGCAAAGCCCCATGTATATGCGCGACTGGATAGCCGAATTGGACAAATTT TCCGGGCTGTACGGACAAGGCACATTACAGGGTGCAGGCAGCATCAGCCGCAAACAGGCAGAGCAGAAAGCCGAACGCGA ATACCGCGCCTATGAAGCGCGCATCCTGTCGCCGGTGGAGCAAGCCTATCTGGAAAGCGTTAAAGCGTTGGAAAAAACAG CCGTGCAACAGATCAAACAGAAAAAAGACCGCACAAAATAA
Upstream 100 bases:
>100_bases AGATTGAAGCATGAGCATCATCCTATACACCGCCAACGACGGCACTGCCCAATTTGCCTTGCAGGAATTTGGCGGACAGC TTTGGCTGACGCAGGCGGAC
Downstream 100 bases:
>100_bases CTACCATTCAGGCTACCTGAAAAAGCAGCCTGCACACCATTGCAGGCAGCCTGAAAGCAGGACGGACTTCAGCCCGCAGA AATAACGGCAAACGGACAGA
Product: DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MAELYQTTKQNISKHIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAVGYRVRSARGIQFRQWATERL DEYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKALYRQVLDLYATSQDYNPKSSESQTFFAAVQNKLHYAASRQ TVAELIYSRADSSKDFMGLTTFQGAIPTLNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKF SGLYGQGTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQKKDRTK
Sequences:
>Translated_306_residues MAELYQTTKQNISKHIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAVGYRVRSARGIQFRQWATERL DEYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKALYRQVLDLYATSQDYNPKSSESQTFFAAVQNKLHYAASRQ TVAELIYSRADSSKDFMGLTTFQGAIPTLNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKF SGLYGQGTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQKKDRTK >Mature_305_residues AELYQTTKQNISKHIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAVGYRVRSARGIQFRQWATERLD EYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKALYRQVLDLYATSQDYNPKSSESQTFFAAVQNKLHYAASRQT VAELIYSRADSSKDFMGLTTFQGAIPTLNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKFS GLYGQGTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQKKDRTK
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35186; Mature: 35055
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELYQTTKQNISKHIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH GYRVRSARGIQFRQWATERLDEYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKA HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LYRQVLDLYATSQDYNPKSSESQTFFAAVQNKLHYAASRQTVAELIYSRADSSKDFMGLT HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH TFQGAIPTLNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKF HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SGLYGQGTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKDRTK HHCCCC >Mature Secondary Structure AELYQTTKQNISKHIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH GYRVRSARGIQFRQWATERLDEYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKA HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LYRQVLDLYATSQDYNPKSSESQTFFAAVQNKLHYAASRQTVAELIYSRADSSKDFMGLT HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH TFQGAIPTLNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKF HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SGLYGQGTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKDRTK HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA