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The map label for this gene is lptE [H]

Identifier: 161869649

GI number: 161869649

Start: 680734

End: 681213

Strand: Direct

Name: lptE [H]

Synonym: NMCC_0666

Alternate gene names: 161869649

Gene position: 680734-681213 (Clockwise)

Preceding gene: 161869648

Following gene: 161869650

Centisome position: 31.61

GC content: 57.29

Gene sequence:

>480_bases
ATGAACAAACTGTTTCTTACTGCCGCAGTGCTGATGCTGGGCGCGTGCGGTTTCCACCTGAAAGGTGCAGACGGCATTTC
TCCGCCGCTGACCTACCGGAGCTGGCACATCGAAGGCGGACAGGCATTGCGGTTTCCTTTGGAAACAGCGCTGTATCAGG
CTTCGGGCAGGGTGGACGATGCTGCCGGCGCGCAGATGACCCTGCGTATAGACAGCGTTTCCCAAAACAAGGAAACCTAC
ACCGTTACCCGTGCGGCAGTCATCAACGAATATCTTTTGATATTGACGGTTGAAGCGCAGGTATTGAAACGCGGCGAGCC
GGTCGGCAAACCGATGACCGTGTCCGTCCGCCGCGTCCTTGCTTATGCCGACAACGAGATCTTGGGCAAACAGGAAGAGG
AAGCGGCATTGTGGGCGGAAATGCGGCAGGATGCCGCCGAACAGATTGTCCGCCGCCTGACCTTTCTGAAGGCGGAATGA

Upstream 100 bases:

>100_bases
GACAGGGCGTATGGCGAGCCTGATTTGGCTGGACGGCAATGCCGTCTGAACACGCCGCTGATATAATCTACCGACTTTGT
GCTTTTGAGAAAGGCAAGCC

Downstream 100 bases:

>100_bases
CGTGGCGGCACATATCGGACACATTGATACGGACGCGCCTTTGAAACCCCTGTACGTCATCCACGGCGAGGAAGAACTGT
TGCGTATCGAGGCATTGGAC

Product: rare lipoprotein B, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALRFPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETY
TVTRAAVINEYLLILTVEAQVLKRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE

Sequences:

>Translated_159_residues
MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALRFPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETY
TVTRAAVINEYLLILTVEAQVLKRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE
>Mature_159_residues
MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALRFPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETY
TVTRAAVINEYLLILTVEAQVLKRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE

Specific function: Together with lptD, is involved in the assembly of LPS in the outer leaflet of the outer membrane [H]

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptE lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007485 [H]

Pfam domain/function: PF04390 RplB [H]

EC number: NA

Molecular weight: Translated: 17565; Mature: 17565

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALRFPLETALYQASGRVDD
CCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHCCCCCC
AAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVLKRGEPVGKPMTVSVRRVL
CCCCEEEEEEECCCCCCCEEHHHHHHHHHCEEEEEEEEHHHHHCCCCCCCCHHHHHHHHH
AYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE
HHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALRFPLETALYQASGRVDD
CCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHCCCCCC
AAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVLKRGEPVGKPMTVSVRRVL
CCCCEEEEEEECCCCCCCEEHHHHHHHHHCEEEEEEEEHHHHHCCCCCCCCHHHHHHHHH
AYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE
HHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA