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The map label for this gene is 161869528

Identifier: 161869528

GI number: 161869528

Start: 567162

End: 568976

Strand: Reverse

Name: 161869528

Synonym: NMCC_0542

Alternate gene names: NA

Gene position: 568976-567162 (Counterclockwise)

Preceding gene: 161869529

Following gene: 161869527

Centisome position: 26.42

GC content: 55.81

Gene sequence:

>1815_bases
ATGCCCGCTGAAACGACCGTATCCGGTGCGCGCCCCGCCGCCAAACTGCCGATTTACATCCTGCCCTGCTTCCTTTGGAT
AGGCATCGTCCCCTTTACCTTCGCGCTCAGGCAGCAACCGTCGCCCGACTTTTACCACGATGCTGCAGCCGCAGCCGGCC
TGATTGTCCTGTTGTTCCTCACGGCAGGAAAAAAGCTGTTTGATGTCAAAATCCCACCCATCAGCTTCCTTCTGTTTGCA
ATGGCGGCGTTTTGGTATCTTCAGGCACGCCTGATGAACCTGATTTACCCCGGTATGAACGACATCGTCTCTTGGATTTT
CATCTTGCTCGCCGTCAGCGCGTGGGCCTGCAAGAGTTTGGTCGCACACTTCGGACAAGAACGCATCGTGACCCTGTTTG
CCTGGTCGCTGCTTATCGGCTCCCTGCTTCAATCCTGCATCGTCGTCATCCAGTTTGCCGGCTGGGAAGACACCCCCATG
CTTCAAAACATTATTGTTTACAGCGGGCAAGGCGTAATCGGACACATCGGGCAGCGCAACAACCTCGGACACTACCTGAT
GTGGGGCATACTCGCCGCCGCCTACCTCAACGGACAACGAAAAATCCCCGCCGCCCTCGGCGCAATCTGCCTGATTATGC
AGACCGCCGTTTTAGGTTTGGTCAATTCGCGCACCATCTTGACCTACATAGCCGCCATCGCCCTCATCCTTCCCTTCTGG
TATTTCCGTTCGGACAAATCCAACAGGCGGACGATGCTCGGCATAGCCGCAGCCGTATTCCTTACCGCGCTGTTCCAATT
TTCCATGAACACCATTCTGGAACCCTTTACCGGCATCCGCTACGAAACTGCCGTCGAACGCGTTGCCAACGGCGGTTTCA
CAGACTTGCCGCGCCAAATCGAATGGAATAAAGCCCTTGCCGCCTTCCAGTCCGCCCCGATATTCGGGCACGGCTGGAAC
AGTTTTGCCCAACAAACCTTCCTCATCAATGCCGAACAGCACAACATATACGACAACCTCCTCAGCAACTTGTTCACCCA
TTCCCACAACATCGTCCTCCAACTCCTTGCAGAGATGGGAATCAGCGGCACGCTTCTGGTTGCCGCAACCCTGCTGACGG
GCATTGCCGGGCTGCTTAAACGCCCCCTGACCCCCGCATCGCTTTTCCTAATCTGCACGCTTGCCGTCAGTATGTGCCAC
AGTATGCTCGAATATCCTTTGTGGTATGTCTATTTCCTCATCCCTTTCGGACTGATGCTCTTCCTGTCCCCCGCAGAGGC
TTCAGACGGCATCGCCTTCAAAAAAGCCGCCAATCTCGGCATACTGACCGCCTCCGCCGCCATATTCGCAGGATTGCTGC
ACTTGGACTGGACATACACCCGGCTGGTTAACGCCTTTTCCCCCGCCACTGACGACAGTGCCAAAACCCTCAACCGGAAA
ATCAACGAGTTGCGCTATATTTCCGCAAACAGTCCGATGCTGTCCTTTTATGCCGACTTCTCCCTCGTAAACTTCGCCCT
GCCGGAATACCCCGAAACCCAGACTTGGGCGGAAGAAGCAACCCTCAAATCACTAAAATACCGCCCCCACTCCGCCACCT
ACCGCATCGCCCTCTACCTGATGCGGCAAGGCAAAGTTGCAGAAGCAAAACAATGGATGCGGGCGACACAGTCCTATTAC
CCCTACCTGATGCCCCGATACGCCGACGAAATCCGCAAACTGCCCGTATGGGCACCGCTGCTACCCGAACTGCTCAAAGA
CTGCAAAGCCTTCGCCGCCGCGCCCGGTCATCCGGAAGCAAAACCCTGCAAATGA

Upstream 100 bases:

>100_bases
TATCCGGCAGAACAAATTTGCGCCGCGCTTTCCGCAGTATTCAGCATCATCTTCTTCATATCATGCCTGTCGTTCGTCAA
ACAATACAAGGAAACAAACA

Downstream 100 bases:

>100_bases
CCCGCGCCGGCGGATGCGGATACCGCCCGAAATGTAAAGCTCCATGCAAGACATTGCAAAAAACAGCAAACCGGTAGGGA
AATACGCTATCAAAAAACAT

Product: integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; O-Antigen Polymerase Family

Number of amino acids: Translated: 604; Mature: 603

Protein sequence:

>604_residues
MPAETTVSGARPAAKLPIYILPCFLWIGIVPFTFALRQQPSPDFYHDAAAAAGLIVLLFLTAGKKLFDVKIPPISFLLFA
MAAFWYLQARLMNLIYPGMNDIVSWIFILLAVSAWACKSLVAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPM
LQNIIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPAALGAICLIMQTAVLGLVNSRTILTYIAAIALILPFW
YFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILEPFTGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWN
SFAQQTFLINAEQHNIYDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLICTLAVSMCH
SMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFAGLLHLDWTYTRLVNAFSPATDDSAKTLNRK
INELRYISANSPMLSFYADFSLVNFALPEYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYY
PYLMPRYADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK

Sequences:

>Translated_604_residues
MPAETTVSGARPAAKLPIYILPCFLWIGIVPFTFALRQQPSPDFYHDAAAAAGLIVLLFLTAGKKLFDVKIPPISFLLFA
MAAFWYLQARLMNLIYPGMNDIVSWIFILLAVSAWACKSLVAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPM
LQNIIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPAALGAICLIMQTAVLGLVNSRTILTYIAAIALILPFW
YFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILEPFTGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWN
SFAQQTFLINAEQHNIYDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLICTLAVSMCH
SMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFAGLLHLDWTYTRLVNAFSPATDDSAKTLNRK
INELRYISANSPMLSFYADFSLVNFALPEYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYY
PYLMPRYADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK
>Mature_603_residues
PAETTVSGARPAAKLPIYILPCFLWIGIVPFTFALRQQPSPDFYHDAAAAAGLIVLLFLTAGKKLFDVKIPPISFLLFAM
AAFWYLQARLMNLIYPGMNDIVSWIFILLAVSAWACKSLVAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPML
QNIIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPAALGAICLIMQTAVLGLVNSRTILTYIAAIALILPFWY
FRSDKSNRRTMLGIAAAVFLTALFQFSMNTILEPFTGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNS
FAQQTFLINAEQHNIYDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLICTLAVSMCHS
MLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFAGLLHLDWTYTRLVNAFSPATDDSAKTLNRKI
NELRYISANSPMLSFYADFSLVNFALPEYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYP
YLMPRYADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67169; Mature: 67037

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAETTVSGARPAAKLPIYILPCFLWIGIVPFTFALRQQPSPDFYHDAAAAAGLIVLLFL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TAGKKLFDVKIPPISFLLFAMAAFWYLQARLMNLIYPGMNDIVSWIFILLAVSAWACKSL
HCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPMLQNIIVYSGQGVIGHIGQRN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCCCCC
NLGHYLMWGILAAAYLNGQRKIPAALGAICLIMQTAVLGLVNSRTILTYIAAIALILPFW
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILEPFTGIRYETAVERVANGGFTDLPRQI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHH
EWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQHNIYDNLLSNLFTHSHNIVLQLLAEMG
HHHHHHHHHHCCCCCCCCHHHHCCCEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
ISGTLLVAATLLTGIAGLLKRPLTPASLFLICTLAVSMCHSMLEYPLWYVYFLIPFGLML
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSPAEASDGIAFKKAANLGILTASAAIFAGLLHLDWTYTRLVNAFSPATDDSAKTLNRK
HCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
INELRYISANSPMLSFYADFSLVNFALPEYPETQTWAEEATLKSLKYRPHSATYRIALYL
HHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
MRQGKVAEAKQWMRATQSYYPYLMPRYADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEA
HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
KPCK
CCCC
>Mature Secondary Structure 
PAETTVSGARPAAKLPIYILPCFLWIGIVPFTFALRQQPSPDFYHDAAAAAGLIVLLFL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TAGKKLFDVKIPPISFLLFAMAAFWYLQARLMNLIYPGMNDIVSWIFILLAVSAWACKSL
HCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPMLQNIIVYSGQGVIGHIGQRN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCCCCC
NLGHYLMWGILAAAYLNGQRKIPAALGAICLIMQTAVLGLVNSRTILTYIAAIALILPFW
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILEPFTGIRYETAVERVANGGFTDLPRQI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHH
EWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQHNIYDNLLSNLFTHSHNIVLQLLAEMG
HHHHHHHHHHCCCCCCCCHHHHCCCEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
ISGTLLVAATLLTGIAGLLKRPLTPASLFLICTLAVSMCHSMLEYPLWYVYFLIPFGLML
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSPAEASDGIAFKKAANLGILTASAAIFAGLLHLDWTYTRLVNAFSPATDDSAKTLNRK
HCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
INELRYISANSPMLSFYADFSLVNFALPEYPETQTWAEEATLKSLKYRPHSATYRIALYL
HHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
MRQGKVAEAKQWMRATQSYYPYLMPRYADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEA
HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
KPCK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA