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The map label for this gene is 161869128

Identifier: 161869128

GI number: 161869128

Start: 122624

End: 124012

Strand: Direct

Name: 161869128

Synonym: NMCC_0122

Alternate gene names: NA

Gene position: 122624-124012 (Clockwise)

Preceding gene: 161869127

Following gene: 161869129

Centisome position: 5.69

GC content: 58.17

Gene sequence:

>1389_bases
ATGAATGCAGTCGTAGTTGCCGTAATCGTTATGCTGGTGCTGTCGCTGTCGCGCGTGCACGTGGTATTGAGCCTGACGAT
CGGCGCGTTTGTCGGCGGCGCGGTGGCGGGTATGCCGCTGCAAAACATTGCCGATGCGGCGGGACAGGTCAGTCAGGCGG
GGATTATCCCCGTGTTTAACAAAGGTTTGGAAGGTGGTGCGAAGATTGCGCTTTCTTATGCGATGCTCGGTGCGTTTGCG
ATGGCGATTACCCATTCCGGCCTGCCGCAGCAGCTTGCCGGCGCGGTCGTCCGCAAACTGAACCGGGGCGGTATGCCCGA
CAGCGTGCGTTCGGGCGAGGGCGCGGTCAAATGGCTGCTGCTTTCCATCATCCTTGTGATGGGCATTATGAGTCAGAACA
TCATCCCCATCCACATTGCCTTTATCCCGATGATTGTTCCGCCGCTGCTTTTGGTGTTCAACCGCCTGAAAATCGACCGC
CGCCTGATTGCGTGCGTCATCACTTTCGGGCTGGTTACGACTTATATGTTCCTGCCTTACGGCTTCGGCGCGATTTTTTT
GAACGAAATCCTGTTGGGCAACATCCATTCCGCCGCGCCGCAGCTTGATGTGAAAAACATTAACGTGATGGCGGCAATGG
CGATTCCCGCGTTGGGAATGCTGGCCGGACTCCTGCTGGCGTTTGTCCATTACCGCAAACCGCGCCTGTACCAAAGCAAC
AATGCCGATACGGCGGGCAACGCCGATGCGGCAAACCGTCCGCAGCCGTCCGCCTACCGCAGCCTGGCCGCCGCCGCCGC
CATTGCCGTATGTTTTGCCATCCAGTTGATGTATGAAGACTCGCTGGTGTTGGGCGCGATGCTCGGTTTCGCCGTATTTA
TGATGTTGGGGGTCATCAACCGCGACAAGGCAAACGACGTATTCGGCGAAGGTATCAAGATGATGGCGATGGTCGGCTTC
ATTATGATTGCCGCGCAGGGTTTTGCCGCCGTGATGAATGCGACCGGGCATATCCAGCCGCTGGTGGAAAGCAGTATGGC
GATATTCGGCAACAGCAAAGGTATGGCGGCATTGGCGATGCTGGTGGTGGGGCTTTTGGTAACGATGGGCATCGGTTCGT
CCTTTTCCACTTTGCCGATTATTGCCGCGATTTATGTGCCTTTGTGTGTCGGTTTGGGTTTTTCGCCGCTTGCCACCGTC
GCCATTGTCGGCACGGCGGGGGCGTTGGGCGATGCCGGTTCGCCTGCGTCCGATTCCACGCTGGGCCCGACGATGGGGCT
GAACGCCGACGGGCAGCACGACCACATCCGCGATTCCGTTATCCCGACCTTCATCCACTACAACATCCCGCTGCTGATTG
CCGGCTGGATTGCCGCGATGGTGCTGTAA

Upstream 100 bases:

>100_bases
AAGCATTTGAAATAATTGTTTGCAAAATTGGCGGGTTTCCCGTTATTGGGTTATGATGTGTTTCGATATGTAAACATTTA
TAGGTTTGGAGCGATAAACA

Downstream 100 bases:

>100_bases
ATGGACGCGGTTCAAGAGTTGGAACGCCGTATTGTCGAACTGGAAATCCAATCCGCGCTTCAGGAGGACGTAATCGCCGG
CCTGAACGCGATGGTGGCGG

Product: integral membrane protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MNAVVVAVIVMLVLSLSRVHVVLSLTIGAFVGGAVAGMPLQNIADAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFA
MAITHSGLPQQLAGAVVRKLNRGGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPALGMLAGLLLAFVHYRKPRLYQSN
NADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQLMYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGF
IMIAAQGFAAVMNATGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGLGFSPLATV
AIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIPLLIAGWIAAMVL

Sequences:

>Translated_462_residues
MNAVVVAVIVMLVLSLSRVHVVLSLTIGAFVGGAVAGMPLQNIADAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFA
MAITHSGLPQQLAGAVVRKLNRGGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPALGMLAGLLLAFVHYRKPRLYQSN
NADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQLMYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGF
IMIAAQGFAAVMNATGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGLGFSPLATV
AIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIPLLIAGWIAAMVL
>Mature_462_residues
MNAVVVAVIVMLVLSLSRVHVVLSLTIGAFVGGAVAGMPLQNIADAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFA
MAITHSGLPQQLAGAVVRKLNRGGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPALGMLAGLLLAFVHYRKPRLYQSN
NADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQLMYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGF
IMIAAQGFAAVMNATGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGLGFSPLATV
AIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIPLLIAGWIAAMVL

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 48066; Mature: 48066

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
>Mature Secondary Structure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CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8021208 [H]