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The map label for this gene is thiO [H]

Identifier: 161869123

GI number: 161869123

Start: 117046

End: 118146

Strand: Reverse

Name: thiO [H]

Synonym: NMCC_0117

Alternate gene names: 161869123

Gene position: 118146-117046 (Counterclockwise)

Preceding gene: 161869124

Following gene: 161869122

Centisome position: 5.49

GC content: 61.22

Gene sequence:

>1101_bases
ATGACCCGTATCGCCATCCTCGGCGGCGGCCTCTCGGGAAGGCTGACCGCACTGCAGCTTGCAGAACAAGGTTATCAGAT
TGCACTTTTCGATAAAGGCTGCCGCCGGGGCGAACACGCCGCCGCCTATGTTGCCGCCGCCATGCTCGCGCCTGCGGCGG
AAGCGGTCGAAGCCACGCCTGAAGTCATCAAACTGGGCAGGCAGAGCATCCCGCTTTGGCGCAACATCAGAGGCCGTCTG
AAAACGCCTGCCATGATGCAGGAAAACGGCAGCCTGATTGTGTGGCACGGGCAGGACAAACCTTTATCCAACGAGTTCGT
CCGCCATCTCAAACGCGGCGGCGTAGCGGATGACGAAATCGTCCGTTGGCGCGCCGACGACATCGCCGAACGCGAACCGC
AACTCGGCGGACGTTTTTCAGACGGCATCTACCTGCCGACCGAAGGCCAGCTCGACGGGCGGCAAATATTGTCTGCACTT
GCCGACGCTTTGGACGAACTGAACGTCCCCTGCCATTGGGAACACGAATGCGTCCCCGAAGGCCTGCAAGCCCAATACGA
CTGGCTGATCGACTGCCGCGGCTACGGCGCAAAAACCGCGTGGAACCAAGCCCCCGAGCACACCAGCACCCTGCGCGGCA
TACGCGGCGAAGTGGCGCGGGTTTACACACCCGAAATCACGCTCAACCGCCCCGTGCGTCTGCTCCATCCGCGTTATCCG
CTCTACATCGCCCCGAAAGAAAACCACGTCTTCGTCATCGGCGCGACCCAAATCGAAAGCGAAAGCCAAGCCCCCGCCAG
CGTGCGTTCAGGGTTGGAACTCTTGTCCGCACTCTATGCCGTCCACCCCGCCTTCGGCGAAGCCGACATCCTCGAAATCG
CCACCGGCCTGCGCCCCACGCTCAACCACCACAACCCCGAAATCCGTTACAACCGCGCCCGACGCCTGATTGAAATCAAC
GGCCTTTTCCGCCACGGTTTCATGATCTCCCCCGCCGTAACCGCCGCCGCCGTCAGATTGGCAGTGGCACTGTTTGACGG
AAAAGACGCGCCCGAACGCGATGAAGAAAGCGGTTTGGCGTATATCCGAAGACAAGATTAA

Upstream 100 bases:

>100_bases
GCATCGGTCTGACCGCCCCCGTAATGTCTGCCGTTGCCATTGCCACCGTACTGGTGCGCCTTTTCTTTAAAAAAACCCAA
TCTTTACAAAGGAACCCGTC

Downstream 100 bases:

>100_bases
AGCCGCCCGAAAGGACACCTTATGACCTTCCCGCCCCTAAAATCCCCGCTCAAATTCTACGCCGTCGTCCCCACCGCCGA
TTGGGTGGGGCGCATGGTCA

Product: D-amino acid oxidase flavoprotein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYVAAAMLAPAAEAVEATPEVIKLGRQSIPLWRNIRGRL
KTPAMMQENGSLIVWHGQDKPLSNEFVRHLKRGGVADDEIVRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
ADALDELNVPCHWEHECVPEGLQAQYDWLIDCRGYGAKTAWNQAPEHTSTLRGIRGEVARVYTPEITLNRPVRLLHPRYP
LYIAPKENHVFVIGATQIESESQAPASVRSGLELLSALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYNRARRLIEIN
GLFRHGFMISPAVTAAAVRLAVALFDGKDAPERDEESGLAYIRRQD

Sequences:

>Translated_366_residues
MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYVAAAMLAPAAEAVEATPEVIKLGRQSIPLWRNIRGRL
KTPAMMQENGSLIVWHGQDKPLSNEFVRHLKRGGVADDEIVRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
ADALDELNVPCHWEHECVPEGLQAQYDWLIDCRGYGAKTAWNQAPEHTSTLRGIRGEVARVYTPEITLNRPVRLLHPRYP
LYIAPKENHVFVIGATQIESESQAPASVRSGLELLSALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYNRARRLIEIN
GLFRHGFMISPAVTAAAVRLAVALFDGKDAPERDEESGLAYIRRQD
>Mature_365_residues
TRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYVAAAMLAPAAEAVEATPEVIKLGRQSIPLWRNIRGRLK
TPAMMQENGSLIVWHGQDKPLSNEFVRHLKRGGVADDEIVRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSALA
DALDELNVPCHWEHECVPEGLQAQYDWLIDCRGYGAKTAWNQAPEHTSTLRGIRGEVARVYTPEITLNRPVRLLHPRYPL
YIAPKENHVFVIGATQIESESQAPASVRSGLELLSALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYNRARRLIEING
LFRHGFMISPAVTAAAVRLAVALFDGKDAPERDEESGLAYIRRQD

Specific function: May have amino acid oxidase activity in the biosynthesis of thiazole when cysteine gives its thiol group to be inserted into the thiazole molecule and the rest of the molecule is deaminated to give pyruvic acid and ammonia [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR012727 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 40534; Mature: 40402

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYVAAAMLAPAAEAVEATP
CCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
EVIKLGRQSIPLWRNIRGRLKTPAMMQENGSLIVWHGQDKPLSNEFVRHLKRGGVADDEI
HHHHHCCCCCCHHHHHHCCCCCCHHEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHH
VRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSALADALDELNVPCHWEHECVPE
EEECCHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GLQAQYDWLIDCRGYGAKTAWNQAPEHTSTLRGIRGEVARVYTPEITLNRPVRLLHPRYP
CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEECCCCCCEECCCCC
LYIAPKENHVFVIGATQIESESQAPASVRSGLELLSALYAVHPAFGEADILEIATGLRPT
EEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
LNHHNPEIRYNRARRLIEINGLFRHGFMISPAVTAAAVRLAVALFDGKDAPERDEESGLA
CCCCCCCEEECCCCEEEEECCCEECCEEECHHHHHHHHHHHHHEECCCCCCCCCCCCCEE
YIRRQD
EEEECC
>Mature Secondary Structure 
TRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYVAAAMLAPAAEAVEATP
CEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
EVIKLGRQSIPLWRNIRGRLKTPAMMQENGSLIVWHGQDKPLSNEFVRHLKRGGVADDEI
HHHHHCCCCCCHHHHHHCCCCCCHHEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHH
VRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSALADALDELNVPCHWEHECVPE
EEECCHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GLQAQYDWLIDCRGYGAKTAWNQAPEHTSTLRGIRGEVARVYTPEITLNRPVRLLHPRYP
CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEECCCCCCEECCCCC
LYIAPKENHVFVIGATQIESESQAPASVRSGLELLSALYAVHPAFGEADILEIATGLRPT
EEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
LNHHNPEIRYNRARRLIEINGLFRHGFMISPAVTAAAVRLAVALFDGKDAPERDEESGLA
CCCCCCCEEECCCCEEEEECCCEECCEEECHHHHHHHHHHHHHEECCCCCCCCCCCCCEE
YIRRQD
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371431 [H]