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The map label for this gene is asnC

Identifier: 161723246

GI number: 161723246

Start: 2584128

End: 2585531

Strand: Direct

Name: asnC

Synonym: lpg2282

Alternate gene names: 161723246

Gene position: 2584128-2585531 (Clockwise)

Preceding gene: 52842493

Following gene: 52842501

Centisome position: 76.05

GC content: 43.16

Gene sequence:

>1404_bases
ATGACAGAAGTCTTTACTATAAAACAATGTCTCGACGGCGAAATCAGTATTGATGAAACCGTTACGGTAAGAGGATGGGT
GAAAACTCGAAGAGATTCAAAAGCTGGCTTGTCTTTCATCAGCCTTCATGATGGCTCTTGCTTTTCTCCCATACAAATCG
TCGCTACCGATCAGTTATCCAACTACCACAAAGAAGTAACAAAATTAACTGCTGGCTGTTCAATGATAGCGACTGGAAAA
TTGGTAGCATCACAAGGAAAAGGGCAATTTTTTGAAATCCAGGCCGAATCTATTGAAGTGGTGGGATGGGTTGAAAACCC
AGACACATACCCTATTCAAGCCAAACGCCATACTCTTGAGTTTTTAAGAGAAGTGGCTCATCTGCGCCCCAGAACCAATA
CCATAAGCGCTGTCACCAGAGTACGTCATTCTTTGGCGCAAGCCATTCATCGTTTTTATCACGAACAAGGCTTTTTTTGG
GTGCATACACCGATCATTACTGCCAGCGACTGTGAAGGAGCAGGAGAAATGTTCAGAGTATCTACTCTGGATTTATTAAA
TATCCCTAAGAATGATAAAGGACAAATCGATTTCAGTAAGGATTTTTTTGGCAGAGAAACGTTCTTAACTGTTTCTGGCC
AACTAAATGTCGAAGCTTATTGTATGGCCATGTCTAAGGTCTACACTTTTGGACCAACATTTCGGGCTGAAAATTCGAAT
ACAAGCCGACATTTGGCTGAATTCTGGATGATCGAACCAGAAATCGCTTTTGCAAATCTGGAAGACATTTGTAAACTCAG
CCAAAATATGCTGCGTTATCTCTGTAAAACGGTTCTTGAAGAGCGTGCCGATGATATGGACTTTTTCAATCAATTTGTCG
CCCCAGGTTGTATAGAACGTATGGAACATATTGCGGATTCTGAATTTGAAATTATGACCTATACTGATGCGATAAAAGCA
CTTGAGGCGAGTGACCAAAAATTTGAATTTCCAGTTAGCTGGGGGCTGGATCTGCAATCAGAGCATGAACGTTACCTGGC
TGAAGTGCTTTGCAAAAAGCCTGTCATTGTGACAAATTACCCGCAAGAAATTAAGGGGTTTTACATGCGTCTTAATGACG
ATGGGAAAACGGTAGCCGCCATGGACGTTTTAGCTCCAGGCATCGGAGAGATTATCGGCGGCAGCCAACGCGAAGAGCGC
TTGGAAATACTGGATAGACGCATGGACGAATGCAACCTGAATAAAGAACATTACCAATGGTATAGAGACTTGCGTCGTTA
TGGCACTGTTCCTCATGCCGGGTTTGGCTTGGGCTTTGAACGCCTTATCAGCTATGTTACAGGAGTATCCAATGTGCGAG
ATGTGATACCTTTCCCTCGCACACCAGGCCATGCCGATTATTAA

Upstream 100 bases:

>100_bases
AGGGTTTAGGAAATACTACAAACGGGAGAAAATCAATCCCTCGAAGGATTGGAATATTTCCTAAGCCCTGAATCAATCGT
TTTCGATTTTGGAGTATATA

Downstream 100 bases:

>100_bases
ATCGATAAGGCGCTTAAAGAATCTTCCTCAACTTCAGCTGTTTGTTGTTGAGGTTGATTCCCCTCAGACAGCAATCGACG
TCTATTTCTTGGCGAAAAAA

Product: asparaginyl-tRNA synthetase

Products: NA

Alternate protein names: Asparagine--tRNA ligase; AsnRS [H]

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MTEVFTIKQCLDGEISIDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYHKEVTKLTAGCSMIATGK
LVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFLREVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFW
VHTPIITASDCEGAGEMFRVSTLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSN
TSRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERADDMDFFNQFVAPGCIERMEHIADSEFEIMTYTDAIKA
LEASDQKFEFPVSWGLDLQSEHERYLAEVLCKKPVIVTNYPQEIKGFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREER
LEILDRRMDECNLNKEHYQWYRDLRRYGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHADY

Sequences:

>Translated_467_residues
MTEVFTIKQCLDGEISIDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYHKEVTKLTAGCSMIATGK
LVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFLREVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFW
VHTPIITASDCEGAGEMFRVSTLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSN
TSRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERADDMDFFNQFVAPGCIERMEHIADSEFEIMTYTDAIKA
LEASDQKFEFPVSWGLDLQSEHERYLAEVLCKKPVIVTNYPQEIKGFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREER
LEILDRRMDECNLNKEHYQWYRDLRRYGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHADY
>Mature_466_residues
TEVFTIKQCLDGEISIDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYHKEVTKLTAGCSMIATGKL
VASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFLREVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWV
HTPIITASDCEGAGEMFRVSTLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSNT
SRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERADDMDFFNQFVAPGCIERMEHIADSEFEIMTYTDAIKAL
EASDQKFEFPVSWGLDLQSEHERYLAEVLCKKPVIVTNYPQEIKGFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERL
EILDRRMDECNLNKEHYQWYRDLRRYGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHADY

Specific function: Unknown

COG id: COG0017

COG function: function code J; Aspartyl/asparaginyl-tRNA synthetases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI226491502, Length=462, Percent_Identity=42.6406926406926, Blast_Score=391, Evalue=1e-109,
Organism=Homo sapiens, GI4758762, Length=454, Percent_Identity=27.7533039647577, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI45439306, Length=349, Percent_Identity=28.9398280802292, Blast_Score=110, Evalue=3e-24,
Organism=Escherichia coli, GI1787161, Length=464, Percent_Identity=69.1810344827586, Blast_Score=701, Evalue=0.0,
Organism=Escherichia coli, GI1790571, Length=470, Percent_Identity=24.0425531914894, Blast_Score=76, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17556372, Length=435, Percent_Identity=32.4137931034483, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71984122, Length=453, Percent_Identity=30.0220750551876, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17551876, Length=347, Percent_Identity=27.0893371757925, Blast_Score=105, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6319872, Length=476, Percent_Identity=34.6638655462185, Blast_Score=282, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6321807, Length=464, Percent_Identity=29.7413793103448, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6323011, Length=344, Percent_Identity=27.0348837209302, Blast_Score=113, Evalue=6e-26,
Organism=Drosophila melanogaster, GI19922416, Length=457, Percent_Identity=37.199124726477, Blast_Score=287, Evalue=1e-77,
Organism=Drosophila melanogaster, GI19921528, Length=467, Percent_Identity=28.6937901498929, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI17136276, Length=344, Percent_Identity=26.7441860465116, Blast_Score=107, Evalue=2e-23,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004364
- InterPro:   IPR018150
- InterPro:   IPR006195
- InterPro:   IPR004522
- InterPro:   IPR002312
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF00152 tRNA-synt_2; PF01336 tRNA_anti [H]

EC number: =6.1.1.22 [H]

Molecular weight: Translated: 53236; Mature: 53105

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50862 AA_TRNA_LIGASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVFTIKQCLDGEISIDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLS
CCCEEEHHHHCCCCCCCCCEEEEEHHHHHCCCCHHCCEEEEECCCCCCCCEEEEEEHHHH
NYHKEVTKLTAGCSMIATGKLVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLE
HHHHHHHHHHHCCCEEECCCEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHH
FLREVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCCCEEEE
STLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSN
EEEHEEECCCCCCCCEEECHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCC
TSRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERADDMDFFNQFVAPGCIER
CHHHHHHHHEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
MEHIADSEFEIMTYTDAIKALEASDQKFEFPVSWGLDLQSEHERYLAEVLCKKPVIVTNY
HHHHCCCCEEEEEHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECC
PQEIKGFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEILDRRMDECNLNKEHYQW
CHHHCEEEEEECCCCCEEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH
YRDLRRYGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHADY
HHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TEVFTIKQCLDGEISIDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLS
CCEEEHHHHCCCCCCCCCEEEEEHHHHHCCCCHHCCEEEEECCCCCCCCEEEEEEHHHH
NYHKEVTKLTAGCSMIATGKLVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLE
HHHHHHHHHHHCCCEEECCCEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHH
FLREVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCCCEEEE
STLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSN
EEEHEEECCCCCCCCEEECHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCC
TSRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERADDMDFFNQFVAPGCIER
CHHHHHHHHEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
MEHIADSEFEIMTYTDAIKALEASDQKFEFPVSWGLDLQSEHERYLAEVLCKKPVIVTNY
HHHHCCCCEEEEEHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECC
PQEIKGFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEILDRRMDECNLNKEHYQW
CHHHCEEEEEECCCCCEEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH
YRDLRRYGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHADY
HHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA