| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is aroA/tyrA [H]
Identifier: 161723198
GI number: 161723198
Start: 3030977
End: 3032998
Strand: Reverse
Name: aroA/tyrA [H]
Synonym: BPSL2517
Alternate gene names: 161723198
Gene position: 3032998-3030977 (Counterclockwise)
Preceding gene: 53720128
Following gene: 53720126
Centisome position: 74.44
GC content: 70.82
Gene sequence:
>2022_bases GTGCTGCTCGCCGCGCCCGTCGCTCAGACGGGCCCGCTGCTTGCGCGGATCGCGCCGTTTCTCGACGCATCGACGATCGT CACCGACGCGGGCAGCACGAAATCGGACGTCGTCGCGGCCGCGCGCGCGGCGCTCGGCGCGCGGATCGGCCAGTTCGTGC CGGGCCACCCGATCGCCGGGCGCGAATCGAGCGGCGTCGACGCGGCGCTCGCCGATCTGTACGTCGGCCGCAACGTCGTG CTATGCGCGCTGCCGGAGAACGCGCCCGACGCGCTCGCGCGCGTCGAAGCGATGTGGCGCGCGGCGCGCGCCGACGTGCG CGCGATGAGCGCCGAGCAGCACGACCGCGTGTTCGCGGCGGTGAGCCACCTGCCGCACGTGCTGTCGTTCGCGCTCGTCG AGCAGATTCTCGGCGAATCCGACGCCGAGCTGAAGTTCTCGTATGCGGCGGGCGGTTTCCGCGATTTCACGCGCATCGCC GCGTCGAGCCCCGAAATGTGGCGCGACGTCTGCCTCGCGAACCGCGCGGCGCTCCTCGACGAGCTCGACGCGTACACCGC GGTGCTCGCGCGTCTGCGCGCGGCGATCGACGCGGGTGACGGCGCCGCGCTCGAGGCCGTGTTCGCGCGCTCGCGCGCCG CGCGCGCCGCCTGGCGCGAGCGCGGCGCGAAGCCCGCCCCCGCTGTCCGTTCAGACACTTCCGGAACAGGATCTCACATG GAACATCTCGATCTCGGCCCGTTCTCCCATGCGCAAGGCACGGTGCGCCTGCCCGGCTCGAAGAGCATTTCGAACCGCGT GCTGCTGCTCGCGGCGCTCGCGGAGGGCGAGACGACCGTCACGAACCTGCTCGATTCCGACGATACGCGCGTGATGCTCG ATGCGTTGACGAAGCTCGGCGTGAAGCTGTCGCGCGACGGCGGCACCTGCGTCGTCGGCGGCACGCGCGGCGCGTTCACC GCGAAGACCGCCGATCTCTTCCTCGGCAACGCGGGCACCGCGGTGCGGCCGCTGACGGCGGCGCTCGCGGTCAACGGCGG CGAGTACCGGATTCACGGGGTGCCGCGGATGCACGAGCGCCCGATCGGCGACCTCGTCGACGGGTTGCGCCAGATCGGCG CGCGGATCGACTACGAGGGCAACGAGGGCTTCCCGCCGCTCAGGATCCGGCCCGCGACGATTTCGGTCGACGCGCCGATC CGCGTGCGCGGCGACGTGTCGAGCCAGTTCCTGACCGCGCTGCTGATGACGCTGCCGCTCGTGAAGGCGAAGGATGGCGC GAGCGTCGTCGAGATCGACGGCGAGCTGATCTCTAAGCCGTACATCGAGATCACGATCAAGCTGATGGCGCGCTTCGGCG TGACGGTGGAGCGCGACGGCTGGCAGCGCTTCACGGTGCCGGCGGGCGTGCGCTACCGGTCGCCCGGCACGATCATGGTC GAGGGCGACGCGTCGTCGGCGTCGTATTTCCTCGCGGCGGGCGCGCTCGGCGGCGGGCCGCTGCGCGTCGAGGGCGTCGG CCGCGCGAGCATCCAGGGCGACGTCGGCTTCGCGAACGCGCTGATGCAGATGGGCGCGAACGTGACGATGGGCGACGACT GGATCGAGGTGCGCGGCATCGGCCATGACCACGGCAGGCTCGCGCCGATCGACATGGACTTCAACCTGATTCCGGACGCC GCGATGACGATCGCGGTCGCCGCGCTGTTCGCCGACGGCCCGAGCACGCTGCGCAACATCGGCAGCTGGCGCGTGAAGGA GACCGACCGGATCGCCGCGATGGCGACCGAGCTGCGCAAGGTCGGCGCGACGGTCGAAGAGGGTGCGGACTACCTCGTCG TGACTCCGCCCGCGCAACTCACGCCGAATGCGTCGATCGATACCTACGACGATCACCGGATGGCGATGTGCTTTTCGCTC GTGAGCCTGGGCGGCGTGCCCGTGCGCATCAACGATCCGAAGTGCGTCGGCAAGACGTTCCCCGACTATTTCGACCGTTT CCTCGCGCTCGCGAACGCGTGA
Upstream 100 bases:
>100_bases GGCGTCGATCGGGCGCGCGCTCGCGTTGCGCGTGATCGATCGCGCGGCGGCGCTCGACGACGATGCGCAACTGCGCGATG CGCTCGCGGGCGCGGACCTC
Downstream 100 bases:
>100_bases CGCCCGTATTGACCCACCCGATGAAATCGACTCGACCTTTTCACCCGACCCCAGTTATTACGATCGACGGCCCGACGGCG TCCGGCAAGGGCACCGTCGC
Product: bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MLLAAPVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAGRESSGVDAALADLYVGRNVV LCALPENAPDALARVEAMWRAARADVRAMSAEQHDRVFAAVSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIA ASSPEMWRDVCLANRAALLDELDAYTAVLARLRAAIDAGDGAALEAVFARSRAARAAWRERGAKPAPAVRSDTSGTGSHM EHLDLGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLGVKLSRDGGTCVVGGTRGAFT AKTADLFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPI RVRGDVSSQFLTALLMTLPLVKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPGTIMV EGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVRGIGHDHGRLAPIDMDFNLIPDA AMTIAVAALFADGPSTLRNIGSWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSL VSLGGVPVRINDPKCVGKTFPDYFDRFLALANA
Sequences:
>Translated_673_residues MLLAAPVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAGRESSGVDAALADLYVGRNVV LCALPENAPDALARVEAMWRAARADVRAMSAEQHDRVFAAVSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIA ASSPEMWRDVCLANRAALLDELDAYTAVLARLRAAIDAGDGAALEAVFARSRAARAAWRERGAKPAPAVRSDTSGTGSHM EHLDLGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLGVKLSRDGGTCVVGGTRGAFT AKTADLFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPI RVRGDVSSQFLTALLMTLPLVKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPGTIMV EGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVRGIGHDHGRLAPIDMDFNLIPDA AMTIAVAALFADGPSTLRNIGSWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSL VSLGGVPVRINDPKCVGKTFPDYFDRFLALANA >Mature_673_residues MLLAAPVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAGRESSGVDAALADLYVGRNVV LCALPENAPDALARVEAMWRAARADVRAMSAEQHDRVFAAVSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIA ASSPEMWRDVCLANRAALLDELDAYTAVLARLRAAIDAGDGAALEAVFARSRAARAAWRERGAKPAPAVRSDTSGTGSHM EHLDLGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLGVKLSRDGGTCVVGGTRGAFT AKTADLFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPI RVRGDVSSQFLTALLMTLPLVKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPGTIMV EGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVRGIGHDHGRLAPIDMDFNLIPDA AMTIAVAALFADGPSTLRNIGSWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSL VSLGGVPVRINDPKCVGKTFPDYFDRFLALANA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=437, Percent_Identity=57.6659038901602, Blast_Score=459, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6320332, Length=455, Percent_Identity=38.021978021978, Blast_Score=241, Evalue=4e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 71081; Mature: 71081
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAAPVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAG CEEECCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC RESSGVDAALADLYVGRNVVLCALPENAPDALARVEAMWRAARADVRAMSAEQHDRVFAA CCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIAASSPEMWRDVCLANRAALLD HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH ELDAYTAVLARLRAAIDAGDGAALEAVFARSRAARAAWRERGAKPAPAVRSDTSGTGSHM HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH EHLDLGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLG HHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHCC VKLSRDGGTCVVGGTRGAFTAKTADLFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHER EEEECCCCEEEECCCCCCCEEEEHHEEECCCCCCHHHEEEEEEECCCCEEEECCCCHHCC PIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPIRVRGDVSSQFLTALLMTLPL CHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEEEEECCCEEEECCCHHHHHHHHHHHHCC VKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPGTIMV EECCCCCEEEEECHHHHCCCHHHHHHHHHHHHCCEEECCCCEEEECCCCEEECCCCEEEE EGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVRGI ECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEECCCEEEEEEC GHDHGRLAPIDMDFNLIPDAAMTIAVAALFADGPSTLRNIGSWRVKETDRIAAMATELRK CCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEECCHHHHHHHHHHHHH VGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKTF HCCHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCC PDYFDRFLALANA HHHHHHHHHHCCC >Mature Secondary Structure MLLAAPVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAG CEEECCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC RESSGVDAALADLYVGRNVVLCALPENAPDALARVEAMWRAARADVRAMSAEQHDRVFAA CCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIAASSPEMWRDVCLANRAALLD HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH ELDAYTAVLARLRAAIDAGDGAALEAVFARSRAARAAWRERGAKPAPAVRSDTSGTGSHM HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH EHLDLGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLG HHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHCC VKLSRDGGTCVVGGTRGAFTAKTADLFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHER EEEECCCCEEEECCCCCCCEEEEHHEEECCCCCCHHHEEEEEEECCCCEEEECCCCHHCC PIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPIRVRGDVSSQFLTALLMTLPL CHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEEEEECCCEEEECCCHHHHHHHHHHHHCC VKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPGTIMV EECCCCCEEEEECHHHHCCCHHHHHHHHHHHHCCEEECCCCEEEECCCCEEECCCCEEEE EGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVRGI ECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEECCCEEEEEEC GHDHGRLAPIDMDFNLIPDAAMTIAVAALFADGPSTLRNIGSWRVKETDRIAAMATELRK CCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEECCHHHHHHHHHHHHH VGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKTF HCCHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCC PDYFDRFLALANA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA