Click here to switch to the map view.

The map label for this gene is puuB [H]

Identifier: 161526308

GI number: 161526308

Start: 3430470

End: 3431858

Strand: Direct

Name: puuB [H]

Synonym: Bmul_3139

Alternate gene names: 161526308

Gene position: 3430470-3431858 (Clockwise)

Preceding gene: 161526307

Following gene: 161526311

Centisome position: 99.48

GC content: 69.33

Gene sequence:

>1389_bases
ATGCGACCTTTCTGGATCGAACAAGCGCTGTTCAACGACGGCGATCTCGCGCCCGCACTGCAGGGCGCGACGCAGGCAGA
CGTCTGCATCGTCGGCGGCGGCTTCACGGGACTCTGGACCGCGATCCAGACGAAGCGACAGAATCCGGCGCTCGACATCG
CGATCGTCGAGAGCGACCTGTGCGGCGCCGGCGCGAGCGGCCGCAACGGCGGATGCCTGCTGACATGGTCCGCGAAATTC
CTGACGCTGCGGCGATTGTTCGGCGAGGCCGAGGCGATCCGGCTCGTGAAGGCGTCGGAAGCGGCCGTGCAGCACATCGC
GGACTTCTGCCGCGAGCACGCGATCGACGCGGAACTGCGGCGCGACGGCACGCTCTACACCGCGACCTCGCCTGCACAGA
TCGGCACGCTCGCGCCGGTGCTCGATGCGCTGGCCGCGTGCGGCATCCACAGCTACGAGCCGCTGCCGCCGGCCGAGGTC
GCGCGCCGCTCCGGGTCCGCGCGCAATCTCGACGGCGTGTACTCGCCGATCGCGGCGACCGTCCATCCGGGCAAGCTCGT
GCGCGGCCTGCGCCGCGTCGCGCTCGCGATGGGCATCCGCCTCTACGAACGCACGCCGATGCTCGCGTTGACGCCGGGCC
AGCCGGTGGTCGTGCGCACGCCGTGCGGCAGCGTGACCGCCAAGAAACTCGTGCTCGCGATCAACGCGTGGATGGCGAGC
CGTTTTCCGCAGTTCGAACGGACGATCGCGGTCGTCTCGAGCGACATGGTGATCACCGACCGGTGCCCGGAGCTGCTCGA
ACGCACGGGGCTCGTCGACGGCGTGTCGGTGCTCGACTCGCGGATCTTCGTCTACTACTACCGGACGACGGTCGACGGCC
GGCTGATGCTCGGCAAGGGCGGCAATACGTTCTCGTGGCGCAGCCGGATCGCGCCCGTCTTCGATCGCCGCTCGCCGTAC
GAGAGCGAACTCACGCGAAGCCTGCACGCGTTCTTTCCGTCGCTCGCCGGCGTGCCGATCACCGCGAGCTGGAACGGGCC
GTCCGACCGCTCGGTGACGGGCTTTCCGTTCTTCGGCCGGTTCGACGGCGCGCCGAACGTGTACTACGGCTTCGGCTATT
CGGGCAACGGCGTCGGACCGACGTACATGGGCGGGCAGATCCTGTCGTCGCTCGTGCTCGACGCCGACAACGCATGGACG
AGCAGCCCGCTCGTGCAAGGGCCGCTCGGCCGCTTCCCGCCGGAGCCGCTGCGCTATGTGGGCGCGCATGTCGTGCGCAA
TGCGATCCGCCGCAAGGAACGCGCGGAAGACGAAAACCGACGGCCGGCGGTTGTCGACACGTGGCTCGCGAAGTTCGCGA
GCGCGGCCGGCAAGGCCGACAAGGGATGA

Upstream 100 bases:

>100_bases
GCAGCGCATGTCCGCCGAAGCCGCCGCGTGATGCGCGCCACACCGGCACCGTTCGGGCCGCGCACGCGCGCGGCCCTTCA
CTCAATCGACTGAACCCTCG

Downstream 100 bases:

>100_bases
TTCGCGCGTCACGCGTCGCGCGCCGCCGCAGCAGCAGATGAAAAAAGGGACGCCGGAAAAGCGTCCCTTCTTCATGCCAT
GTGACGTGCGCACGCCGCGC

Product: aminophosphonate oxidoreductase

Products: NA

Alternate protein names: Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MRPFWIEQALFNDGDLAPALQGATQADVCIVGGGFTGLWTAIQTKRQNPALDIAIVESDLCGAGASGRNGGCLLTWSAKF
LTLRRLFGEAEAIRLVKASEAAVQHIADFCREHAIDAELRRDGTLYTATSPAQIGTLAPVLDALAACGIHSYEPLPPAEV
ARRSGSARNLDGVYSPIAATVHPGKLVRGLRRVALAMGIRLYERTPMLALTPGQPVVVRTPCGSVTAKKLVLAINAWMAS
RFPQFERTIAVVSSDMVITDRCPELLERTGLVDGVSVLDSRIFVYYYRTTVDGRLMLGKGGNTFSWRSRIAPVFDRRSPY
ESELTRSLHAFFPSLAGVPITASWNGPSDRSVTGFPFFGRFDGAPNVYYGFGYSGNGVGPTYMGGQILSSLVLDADNAWT
SSPLVQGPLGRFPPEPLRYVGAHVVRNAIRRKERAEDENRRPAVVDTWLAKFASAAGKADKG

Sequences:

>Translated_462_residues
MRPFWIEQALFNDGDLAPALQGATQADVCIVGGGFTGLWTAIQTKRQNPALDIAIVESDLCGAGASGRNGGCLLTWSAKF
LTLRRLFGEAEAIRLVKASEAAVQHIADFCREHAIDAELRRDGTLYTATSPAQIGTLAPVLDALAACGIHSYEPLPPAEV
ARRSGSARNLDGVYSPIAATVHPGKLVRGLRRVALAMGIRLYERTPMLALTPGQPVVVRTPCGSVTAKKLVLAINAWMAS
RFPQFERTIAVVSSDMVITDRCPELLERTGLVDGVSVLDSRIFVYYYRTTVDGRLMLGKGGNTFSWRSRIAPVFDRRSPY
ESELTRSLHAFFPSLAGVPITASWNGPSDRSVTGFPFFGRFDGAPNVYYGFGYSGNGVGPTYMGGQILSSLVLDADNAWT
SSPLVQGPLGRFPPEPLRYVGAHVVRNAIRRKERAEDENRRPAVVDTWLAKFASAAGKADKG
>Mature_462_residues
MRPFWIEQALFNDGDLAPALQGATQADVCIVGGGFTGLWTAIQTKRQNPALDIAIVESDLCGAGASGRNGGCLLTWSAKF
LTLRRLFGEAEAIRLVKASEAAVQHIADFCREHAIDAELRRDGTLYTATSPAQIGTLAPVLDALAACGIHSYEPLPPAEV
ARRSGSARNLDGVYSPIAATVHPGKLVRGLRRVALAMGIRLYERTPMLALTPGQPVVVRTPCGSVTAKKLVLAINAWMAS
RFPQFERTIAVVSSDMVITDRCPELLERTGLVDGVSVLDSRIFVYYYRTTVDGRLMLGKGGNTFSWRSRIAPVFDRRSPY
ESELTRSLHAFFPSLAGVPITASWNGPSDRSVTGFPFFGRFDGAPNVYYGFGYSGNGVGPTYMGGQILSSLVLDADNAWT
SSPLVQGPLGRFPPEPLRYVGAHVVRNAIRRKERAEDENRRPAVVDTWLAKFASAAGKADKG

Specific function: Involved in the breakdown of putrescine via the oxidation of L-glutamylputrescine [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787559, Length=410, Percent_Identity=29.7560975609756, Blast_Score=154, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 49932; Mature: 49932

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPFWIEQALFNDGDLAPALQGATQADVCIVGGGFTGLWTAIQTKRQNPALDIAIVESDL
CCCCCHHHHHCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCC
CGAGASGRNGGCLLTWSAKFLTLRRLFGEAEAIRLVKASEAAVQHIADFCREHAIDAELR
CCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RDGTLYTATSPAQIGTLAPVLDALAACGIHSYEPLPPAEVARRSGSARNLDGVYSPIAAT
CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCHHHC
VHPGKLVRGLRRVALAMGIRLYERTPMLALTPGQPVVVRTPCGSVTAKKLVLAINAWMAS
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHH
RFPQFERTIAVVSSDMVITDRCPELLERTGLVDGVSVLDSRIFVYYYRTTVDGRLMLGKG
CCCHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHCCEEEEEEEEEECCCEEEECCC
GNTFSWRSRIAPVFDRRSPYESELTRSLHAFFPSLAGVPITASWNGPSDRSVTGFPFFGR
CCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEECCCCCCC
FDGAPNVYYGFGYSGNGVGPTYMGGQILSSLVLDADNAWTSSPLVQGPLGRFPPEPLRYV
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
GAHVVRNAIRRKERAEDENRRPAVVDTWLAKFASAAGKADKG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRPFWIEQALFNDGDLAPALQGATQADVCIVGGGFTGLWTAIQTKRQNPALDIAIVESDL
CCCCCHHHHHCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCC
CGAGASGRNGGCLLTWSAKFLTLRRLFGEAEAIRLVKASEAAVQHIADFCREHAIDAELR
CCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RDGTLYTATSPAQIGTLAPVLDALAACGIHSYEPLPPAEVARRSGSARNLDGVYSPIAAT
CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCHHHC
VHPGKLVRGLRRVALAMGIRLYERTPMLALTPGQPVVVRTPCGSVTAKKLVLAINAWMAS
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHH
RFPQFERTIAVVSSDMVITDRCPELLERTGLVDGVSVLDSRIFVYYYRTTVDGRLMLGKG
CCCHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHCCEEEEEEEEEECCCEEEECCC
GNTFSWRSRIAPVFDRRSPYESELTRSLHAFFPSLAGVPITASWNGPSDRSVTGFPFFGR
CCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEECCCCCCC
FDGAPNVYYGFGYSGNGVGPTYMGGQILSSLVLDADNAWTSSPLVQGPLGRFPPEPLRYV
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
GAHVVRNAIRRKERAEDENRRPAVVDTWLAKFASAAGKADKG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553; 7984428 [H]