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The map label for this gene is yjiA [H]

Identifier: 161526253

GI number: 161526253

Start: 3367435

End: 3368514

Strand: Direct

Name: yjiA [H]

Synonym: Bmul_3084

Alternate gene names: 161526253

Gene position: 3367435-3368514 (Clockwise)

Preceding gene: 161526252

Following gene: 161526254

Centisome position: 97.65

GC content: 62.5

Gene sequence:

>1080_bases
ATGGCCACTCCCGTCACCATCCTCACCGGCTTCCTCGGCAGCGGCAAGACGACGCTGCTCAAGCGCATCCTGAACGAACA
GCACGGCATGAAGATCGCCGTGATCGAGAACGAATTCGGCGAAGAGAACATCGACAACGAGATCCTCGTGCAGGACACGA
ACGAGCAGATCATCCAGATGAGCAACGGCTGCATCTGCTGCACGATCCGCGGCGATCTGGCGCGCGCGCTCGGCGATCTC
GCCGCGAAGAAGCGCGAAGGCAAGCTCGACTTCGACCGCATCGTGATCGAGACGACCGGCCTCGCGAACCCGGGCCCGGT
CGCGCAGACCTTCTTCATCGACAGCGAAATCGCCGACGACTTCCTGCTCGACGCGGTCATCACGCTCGTCGACGCGAAGC
ACGCGAACGCGCAGCTCGACGAGCACGAAGTCGTGCAGCGCCAGGTCGGCTTCGCCGATCGCCTGTTCATCACGAAGTCG
GACCTGGTCGACGACGAGACCGTCGCGGGCCTCAAGCACCGCCTGATGCACATGAACCCGAAGGCCACGATCAAGCTCGT
GAACTTCGGCGAGGCCGACATCAAGGAAATCTTCGACCTGCGCGGCTTCAATCTGAACGCGAAGCTCGAGATCGACCCGG
ACTTCCTCGCCGAGGACGATCACGCGCACCACGATCACGACCATGACCACGATCACGCCCATTGCGATCACGATCACGGC
CAATGCGCGCACGATCACGACCACGGCCACGGCCACCACAACCACCACCACGCGCACCACGACGACAAGATCAAGTCGTT
CGTGTACCGCAACGATCGCCCGTTCGATCCGAACAAGCTGGAAGACTTCCTCGGCGGCATCCTGCAGATCTACGGCGAGC
GCATGCTGCGCTACAAGGGCGTGCTGTACATGAAGGGCGTCGACCGCAAGGTCGTGTTCCAGGGCGTGCACCAGATGATG
GGCAGCGATCTCGCCGCGAAGTGGCTGCCGGCCGAGAAGAAGACCAACAAGATGGTGTTCATCGGCGTCGACCTGCCGCA
GGACCTGATCACCGACGGCCTCGACGCCTGCCTTGCGTAA

Upstream 100 bases:

>100_bases
GCTTGACAGATATGTTTCAATGGATGGCTGTGCGTCCCGCTGAGCGGGCGCGTTGCACATCCTGGTTTTGACCCCGATTC
ACGAACCACAGGCGACCGAC

Downstream 100 bases:

>100_bases
CGCCCGCGCCCTTCGCGCACCGGCGCGGCGCCGCTTTCGGGCGGCGCCCGCCAGCGCCGCCGGGAAGGGTTTTGCCGTCA
TCGCTTTTTCGCGATTTGCG

Product: cobalamin synthesis protein P47K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MATPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDTNEQIIQMSNGCICCTIRGDLARALGDL
AAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIADDFLLDAVITLVDAKHANAQLDEHEVVQRQVGFADRLFITKS
DLVDDETVAGLKHRLMHMNPKATIKLVNFGEADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHHDHDHDHDHAHCDHDHG
QCAHDHDHGHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMM
GSDLAAKWLPAEKKTNKMVFIGVDLPQDLITDGLDACLA

Sequences:

>Translated_359_residues
MATPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDTNEQIIQMSNGCICCTIRGDLARALGDL
AAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIADDFLLDAVITLVDAKHANAQLDEHEVVQRQVGFADRLFITKS
DLVDDETVAGLKHRLMHMNPKATIKLVNFGEADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHHDHDHDHDHAHCDHDHG
QCAHDHDHGHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMM
GSDLAAKWLPAEKKTNKMVFIGVDLPQDLITDGLDACLA
>Mature_358_residues
ATPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDTNEQIIQMSNGCICCTIRGDLARALGDLA
AKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIADDFLLDAVITLVDAKHANAQLDEHEVVQRQVGFADRLFITKSD
LVDDETVAGLKHRLMHMNPKATIKLVNFGEADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHHDHDHDHDHAHCDHDHGQ
CAHDHDHGHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMG
SDLAAKWLPAEKKTNKMVFIGVDLPQDLITDGLDACLA

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=365, Percent_Identity=31.5068493150685, Blast_Score=168, Evalue=8e-42,
Organism=Homo sapiens, GI33469141, Length=365, Percent_Identity=31.5068493150685, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI146231952, Length=365, Percent_Identity=32.0547945205479, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI148727351, Length=365, Percent_Identity=31.5068493150685, Blast_Score=164, Evalue=8e-41,
Organism=Homo sapiens, GI223941779, Length=359, Percent_Identity=31.4763231197772, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI223941776, Length=356, Percent_Identity=30.3370786516854, Blast_Score=151, Evalue=9e-37,
Organism=Homo sapiens, GI119120938, Length=144, Percent_Identity=45.1388888888889, Blast_Score=125, Evalue=5e-29,
Organism=Escherichia coli, GI87082430, Length=347, Percent_Identity=38.328530259366, Blast_Score=224, Evalue=7e-60,
Organism=Escherichia coli, GI1788499, Length=177, Percent_Identity=31.638418079096, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324356, Length=224, Percent_Identity=29.4642857142857, Blast_Score=116, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 40336; Mature: 40205

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDTNEQIIQM
CCCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCHHHHEE
SNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIADD
CCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCEEEEEECHHHHHH
FLLDAVITLVDAKHANAQLDEHEVVQRQVGFADRLFITKSDLVDDETVAGLKHRLMHMNP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHCCCC
KATIKLVNFGEADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHHDHDHDHDHAHCDHDHG
CCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QCAHDHDHGHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
VLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDLITDGLDACLA
EEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ATPVTILTGFLGSGKTTLLKRILNEQHGMKIAVIENEFGEENIDNEILVQDTNEQIIQM
CCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCHHHHEE
SNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIADD
CCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCEEEEEECHHHHHH
FLLDAVITLVDAKHANAQLDEHEVVQRQVGFADRLFITKSDLVDDETVAGLKHRLMHMNP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHHCCCC
KATIKLVNFGEADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHHDHDHDHDHAHCDHDHG
CCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QCAHDHDHGHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYKG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
VLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDLITDGLDACLA
EEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]