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The map label for this gene is xerC [H]

Identifier: 161526251

GI number: 161526251

Start: 3364951

End: 3365871

Strand: Direct

Name: xerC [H]

Synonym: Bmul_3082

Alternate gene names: 161526251

Gene position: 3364951-3365871 (Clockwise)

Preceding gene: 161526250

Following gene: 161526252

Centisome position: 97.58

GC content: 68.84

Gene sequence:

>921_bases
ATGACCGACGATCCGATCGCCGCCTACCTGTCGAACCTGAAGTACGTCAGGCAGTTGTCGGAACACACGCTGCGCGCGTA
TACGCACGAACTCGACGAACTGAAGAAGCTCGCCGCCGGTCGTCCGCTCGACACGCTGGTCGCGGCCGACATACGCGGCG
CCGTCGCGCGTGCGCACGCGGGCGGGCTGTCGGCGCGCTCGATCTCGCACCGGCTGTCCGCGTGGCGCGCGTTCTACCGC
TGGCTCGCGCAGCGCGTCGAGATGCCGGCGAATCCGGTCGCCGCGGTACGCGCGCCGAAGCGGCCGAAGACGCTGCCGAA
AGCGCTGTCGGTCGACGATGCGTCCGCGCTGATGGATGCGCCGCTCGCCGATACGACCGAAGGCATCCGCGATCACGCGA
TCCTCGAGCTGTTCTATTCGTCGGGCCTGCGCCTCGCCGAGCTGATCGGCCTCGACGTCGCGTATACGCAGACCGGCGAT
TACCGGTCGGCCGGCTGGCTCGATCTCGCCGAAGCCGAAGTGACCGTGCGCGGCAAGGGCAACAAGGAGCGCAAGGTGCC
GGTCGGCCGCAAGGCGATCGACGCGCTGAACGCGTGGCTCGCGGTGCGCGGCGAATTCGTGAAGCACGATCCGCATCCGC
TGTTCCTGTCGGTGCGCGGCAACCGGATGTCGCCGGGCGTCGTGCGCGAACGCGTGAAGCGCGCGGCACTCGCCGCCGGC
ATTCCCGCGCACGTGCATCCGCACGTGCTGCGCCATTCGTTCGCGACGCATGTGCTGCAGTCGAGCGGCGACCTGCGCGC
GGTGCAGGAGCTGCTCGGCCACGCGAGCGTCTCGGCGACGCAGGTGTATACGTCGCTCGACTTCCAGCATCTCGCGAAGA
TTTACGACAGCGCGCATCCGCGCGCGAAGAAGCGCGACTGA

Upstream 100 bases:

>100_bases
CGCTTCCACGACGGCATGGCGACCGACTTCCTCGCGCAGATCGCGACGCTCGCGAGCGCCGCGCTCACGCGCCTGCTGCC
GCACTGATACCGCGCACGCG

Downstream 100 bases:

>100_bases
CGCGCTTTCCGTGTTATCCGCCGCGCGCGGCGACCGGCGACGGTCGGCTCCGCCCGCGGCCCATTTCGAATTCATCATGC
AAACCGTCACACTGAAGCCG

Product: site-specific tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTDDPIAAYLSNLKYVRQLSEHTLRAYTHELDELKKLAAGRPLDTLVAADIRGAVARAHAGGLSARSISHRLSAWRAFYR
WLAQRVEMPANPVAAVRAPKRPKTLPKALSVDDASALMDAPLADTTEGIRDHAILELFYSSGLRLAELIGLDVAYTQTGD
YRSAGWLDLAEAEVTVRGKGNKERKVPVGRKAIDALNAWLAVRGEFVKHDPHPLFLSVRGNRMSPGVVRERVKRAALAAG
IPAHVHPHVLRHSFATHVLQSSGDLRAVQELLGHASVSATQVYTSLDFQHLAKIYDSAHPRAKKRD

Sequences:

>Translated_306_residues
MTDDPIAAYLSNLKYVRQLSEHTLRAYTHELDELKKLAAGRPLDTLVAADIRGAVARAHAGGLSARSISHRLSAWRAFYR
WLAQRVEMPANPVAAVRAPKRPKTLPKALSVDDASALMDAPLADTTEGIRDHAILELFYSSGLRLAELIGLDVAYTQTGD
YRSAGWLDLAEAEVTVRGKGNKERKVPVGRKAIDALNAWLAVRGEFVKHDPHPLFLSVRGNRMSPGVVRERVKRAALAAG
IPAHVHPHVLRHSFATHVLQSSGDLRAVQELLGHASVSATQVYTSLDFQHLAKIYDSAHPRAKKRD
>Mature_305_residues
TDDPIAAYLSNLKYVRQLSEHTLRAYTHELDELKKLAAGRPLDTLVAADIRGAVARAHAGGLSARSISHRLSAWRAFYRW
LAQRVEMPANPVAAVRAPKRPKTLPKALSVDDASALMDAPLADTTEGIRDHAILELFYSSGLRLAELIGLDVAYTQTGDY
RSAGWLDLAEAEVTVRGKGNKERKVPVGRKAIDALNAWLAVRGEFVKHDPHPLFLSVRGNRMSPGVVRERVKRAALAAGI
PAHVHPHVLRHSFATHVLQSSGDLRAVQELLGHASVSATQVYTSLDFQHLAKIYDSAHPRAKKRD

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4973

COG function: function code L; Site-specific recombinase XerC

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=309, Percent_Identity=46.2783171521036, Blast_Score=258, Evalue=4e-70,
Organism=Escherichia coli, GI1789261, Length=302, Percent_Identity=36.0927152317881, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1790768, Length=192, Percent_Identity=28.125, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790767, Length=175, Percent_Identity=25.7142857142857, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 33606; Mature: 33475

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDPIAAYLSNLKYVRQLSEHTLRAYTHELDELKKLAAGRPLDTLVAADIRGAVARAHA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
GGLSARSISHRLSAWRAFYRWLAQRVEMPANPVAAVRAPKRPKTLPKALSVDDASALMDA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHCCCCHHHHHHCC
PLADTTEGIRDHAILELFYSSGLRLAELIGLDVAYTQTGDYRSAGWLDLAEAEVTVRGKG
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCEEEECCEEEEECCC
NKERKVPVGRKAIDALNAWLAVRGEFVKHDPHPLFLSVRGNRMSPGVVRERVKRAALAAG
CCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC
IPAHVHPHVLRHSFATHVLQSSGDLRAVQELLGHASVSATQVYTSLDFQHLAKIYDSAHP
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCC
RAKKRD
CCCCCC
>Mature Secondary Structure 
TDDPIAAYLSNLKYVRQLSEHTLRAYTHELDELKKLAAGRPLDTLVAADIRGAVARAHA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
GGLSARSISHRLSAWRAFYRWLAQRVEMPANPVAAVRAPKRPKTLPKALSVDDASALMDA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHCCCCHHHHHHCC
PLADTTEGIRDHAILELFYSSGLRLAELIGLDVAYTQTGDYRSAGWLDLAEAEVTVRGKG
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCEEEECCEEEEECCC
NKERKVPVGRKAIDALNAWLAVRGEFVKHDPHPLFLSVRGNRMSPGVVRERVKRAALAAG
CCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC
IPAHVHPHVLRHSFATHVLQSSGDLRAVQELLGHASVSATQVYTSLDFQHLAKIYDSAHP
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCC
RAKKRD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA