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The map label for this gene is bfrD [H]

Identifier: 161526113

GI number: 161526113

Start: 3222135

End: 3224336

Strand: Reverse

Name: bfrD [H]

Synonym: Bmul_2944

Alternate gene names: 161526113

Gene position: 3224336-3222135 (Counterclockwise)

Preceding gene: 161526114

Following gene: 161526111

Centisome position: 93.5

GC content: 69.57

Gene sequence:

>2202_bases
ATGACGAGCCCGATCCAGTCGAGCGCGACGCCGCCGCGTCGCCCGGCTGCTTCCGTCGCATTCGCGATGATGACCTGCGC
GGCCGCGCCGGCCGCCGCGGACGACACCGATCCGCGGCGCGCGCCGCACCTGAGTCCGATCGTCGTGCAGGGCGAGCGCG
ACACCGGCTCGCGCGTCGATCGTTCGGGCTCCGCGAAATACGCGACGCCGCTGCTCGACGTGCCGCAGACGATCACCGTC
GTGCCGCGCGAAGTGCTCGACGAGCAGCAGGTCACGAGCCTGCGCGAAGCGCTGTCCAACGTCGCGGGCATCACGTTCAA
CGCGGGCGAGGGCGGCGGCGGGTCGGGCGACATGCTGCTCATCCGCGGCTTCAGCGCGCACGCGAACCTGCAACTCGACG
GATTGCGCGACAGCGCGCAGAACAATCGCAGCGATCTGTTCAACATCGATGCCGTCGAGGTCATCAAGGGGCCGAATTCG
GTGTTCGGCGGCGCGGGCACGACGGGCGGCTCGGTCAACCTGATCAGCAAGGCGCCGCAGCGCAAGGCGTTCATCGAGGC
CGGCACGGTGCTCGGCACGTCCGGCTACCGGCGCGCGACGCTCGACGCGAACCGCCCGCTGCCCGGCAGCGACGGCAGTT
CGGTGTTCCGGCTCAATGCGATGGCGCACGTGAACGACGTGCCGGGCCGCAACGACATCCGCAAGCGGCGCTGGGGCGTC
GCACCGTCGCTCGGCTTCGGGCTCGGCACGCCGACGCGCGTGACGCTCGGCTATTTCCACCAGTACGACCACAACCTGCC
CGACTACGGGCTGCCCGCGCGCAACGGCCAGGTGCTCGGCGGCGTCGCGCGCGATGCCTATTTCGGCTGGCGCAATCTCG
ACCGCGAACGGATCGAGTCCAACACGTTCACCGTGAAGGCCGAGCACGACGTGTCGCCGCAGCTGAAGCTGCAGAACCTG
AGCCGCTACGCGCATCTGAATCGCGACACGGTGGTTTCCGCGTCGCATGCGAACCTCGACGGGATGCCGCCCGGGCGCTA
CAAGCCGGCGGGGCCGCAGGGCTACGGGCGCGACGCGTCCACCGCGATGTGGATGAACCAGACGAACGCGACCGGCGAAT
TCAGCACGTTCGGCGTCGGCCATACGCTCGTCGCGGGCTTCGAGATCTCGCGCGAGACGTACGCGCGCAGCACCTACTCG
CACGGGCTCGCGCGTCACTTCCCGAAGAACGGCTATGCGCTCGCCGCGCCGCCCGGCTACTGGACGGGCCCCGCGCGCCG
CGAGAACACCGCGCGCACCGATACGGCGCTCGACGTGAAGGCGCTGTACGCGTTCGATACGATCTCGTTCGGCCGCTACT
GGGACCTCGACGTCGGGCTGCGTCACGACTGGATCGACGGCTGGGCGCGCAATACGCCGGCCGGCAAGCCGACCGAGCGC
GGGGAAACCTCTGACCGTCATCTGAGCACGCGCGCGGGGCTCGTGTTCAAGCCGACCGACAACGGCCGCCTCTACGCGGC
ATACGGCACGTCGTTCAATCCGTCGGCGGAATTCCTCGTCACGACGGGCAGCGGCGTGACCGCGGCATCGGGCGGCCTCG
CACCCGAGAAGAACGAGAGCGTCGAACTCGGCGCGAAGTGGGAGGGCCTCGCCGGTCTCGCGGTGAACGGCGCGCTGTTC
CAGACGTACAAGCACCACGCGCGCGAACGGATGTCCGACGGCACCTACCTGCTCGCCGGCAAGCAGCGCGTGCGCGGCGT
CGAGCTCGGCGCGGCCGGCAAGATCACGCCGAAGTGGGATCTGTTCGCGAACTACACCTATCTCGCGAGTGCGACGCTCG
ACTCGCCGTCGTCGCCGCGTCGCAACGGGAAGGCGCTCGGCAACACGCCGCGGCACGCGTTCAATCTGTGGACGACCTAT
CGGCTGCCGGCCGGCTGGACAATCGGCTATGGGTCGCATTTCGTCGGCCGCCGCAACGTGACGTCCGAGGGCGACGGGAC
GCTCGGCGCGTACTGGGTGCACAACCTGATGGCGAGCTACGACGTGAACCGGCGGCTGCGGTTTCAGCTCAACGTCGACA
ACCTGTTCGATCGCGCGTACGTGGAGCGCGTGCGCCAGCAGCCGGGCAACGCGTCGCGCTCGTCGGCCGTCGAGTTCGGC
GACGGGCGCGCGGCGATGCTGTCGGCCGTGTACACGTTCTGA

Upstream 100 bases:

>100_bases
CATGGGCCGCTTCCACGGAAATTTCGTCTCCGTCCGATTGCCATGTCGCGCCCTTTTATTTGGAATGAGAACCATTCTCA
TCAATGAAGGGGAAGTGACC

Downstream 100 bases:

>100_bases
GTTCGCGCGCTACGCGGGCCGTTTCGGGAACAGCGGCAGCGTCGCGCATGCGCATGCGCCGGCCGCGAGCCACACGACGC
TCCACGTACTCGCCGCGAGC

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 733; Mature: 732

Protein sequence:

>733_residues
MTSPIQSSATPPRRPAASVAFAMMTCAAAPAAADDTDPRRAPHLSPIVVQGERDTGSRVDRSGSAKYATPLLDVPQTITV
VPREVLDEQQVTSLREALSNVAGITFNAGEGGGGSGDMLLIRGFSAHANLQLDGLRDSAQNNRSDLFNIDAVEVIKGPNS
VFGGAGTTGGSVNLISKAPQRKAFIEAGTVLGTSGYRRATLDANRPLPGSDGSSVFRLNAMAHVNDVPGRNDIRKRRWGV
APSLGFGLGTPTRVTLGYFHQYDHNLPDYGLPARNGQVLGGVARDAYFGWRNLDRERIESNTFTVKAEHDVSPQLKLQNL
SRYAHLNRDTVVSASHANLDGMPPGRYKPAGPQGYGRDASTAMWMNQTNATGEFSTFGVGHTLVAGFEISRETYARSTYS
HGLARHFPKNGYALAAPPGYWTGPARRENTARTDTALDVKALYAFDTISFGRYWDLDVGLRHDWIDGWARNTPAGKPTER
GETSDRHLSTRAGLVFKPTDNGRLYAAYGTSFNPSAEFLVTTGSGVTAASGGLAPEKNESVELGAKWEGLAGLAVNGALF
QTYKHHARERMSDGTYLLAGKQRVRGVELGAAGKITPKWDLFANYTYLASATLDSPSSPRRNGKALGNTPRHAFNLWTTY
RLPAGWTIGYGSHFVGRRNVTSEGDGTLGAYWVHNLMASYDVNRRLRFQLNVDNLFDRAYVERVRQQPGNASRSSAVEFG
DGRAAMLSAVYTF

Sequences:

>Translated_733_residues
MTSPIQSSATPPRRPAASVAFAMMTCAAAPAAADDTDPRRAPHLSPIVVQGERDTGSRVDRSGSAKYATPLLDVPQTITV
VPREVLDEQQVTSLREALSNVAGITFNAGEGGGGSGDMLLIRGFSAHANLQLDGLRDSAQNNRSDLFNIDAVEVIKGPNS
VFGGAGTTGGSVNLISKAPQRKAFIEAGTVLGTSGYRRATLDANRPLPGSDGSSVFRLNAMAHVNDVPGRNDIRKRRWGV
APSLGFGLGTPTRVTLGYFHQYDHNLPDYGLPARNGQVLGGVARDAYFGWRNLDRERIESNTFTVKAEHDVSPQLKLQNL
SRYAHLNRDTVVSASHANLDGMPPGRYKPAGPQGYGRDASTAMWMNQTNATGEFSTFGVGHTLVAGFEISRETYARSTYS
HGLARHFPKNGYALAAPPGYWTGPARRENTARTDTALDVKALYAFDTISFGRYWDLDVGLRHDWIDGWARNTPAGKPTER
GETSDRHLSTRAGLVFKPTDNGRLYAAYGTSFNPSAEFLVTTGSGVTAASGGLAPEKNESVELGAKWEGLAGLAVNGALF
QTYKHHARERMSDGTYLLAGKQRVRGVELGAAGKITPKWDLFANYTYLASATLDSPSSPRRNGKALGNTPRHAFNLWTTY
RLPAGWTIGYGSHFVGRRNVTSEGDGTLGAYWVHNLMASYDVNRRLRFQLNVDNLFDRAYVERVRQQPGNASRSSAVEFG
DGRAAMLSAVYTF
>Mature_732_residues
TSPIQSSATPPRRPAASVAFAMMTCAAAPAAADDTDPRRAPHLSPIVVQGERDTGSRVDRSGSAKYATPLLDVPQTITVV
PREVLDEQQVTSLREALSNVAGITFNAGEGGGGSGDMLLIRGFSAHANLQLDGLRDSAQNNRSDLFNIDAVEVIKGPNSV
FGGAGTTGGSVNLISKAPQRKAFIEAGTVLGTSGYRRATLDANRPLPGSDGSSVFRLNAMAHVNDVPGRNDIRKRRWGVA
PSLGFGLGTPTRVTLGYFHQYDHNLPDYGLPARNGQVLGGVARDAYFGWRNLDRERIESNTFTVKAEHDVSPQLKLQNLS
RYAHLNRDTVVSASHANLDGMPPGRYKPAGPQGYGRDASTAMWMNQTNATGEFSTFGVGHTLVAGFEISRETYARSTYSH
GLARHFPKNGYALAAPPGYWTGPARRENTARTDTALDVKALYAFDTISFGRYWDLDVGLRHDWIDGWARNTPAGKPTERG
ETSDRHLSTRAGLVFKPTDNGRLYAAYGTSFNPSAEFLVTTGSGVTAASGGLAPEKNESVELGAKWEGLAGLAVNGALFQ
TYKHHARERMSDGTYLLAGKQRVRGVELGAAGKITPKWDLFANYTYLASATLDSPSSPRRNGKALGNTPRHAFNLWTTYR
LPAGWTIGYGSHFVGRRNVTSEGDGTLGAYWVHNLMASYDVNRRLRFQLNVDNLFDRAYVERVRQQPGNASRSSAVEFGD
GRAAMLSAVYTF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=755, Percent_Identity=30.7284768211921, Blast_Score=297, Evalue=2e-81,
Organism=Escherichia coli, GI1786344, Length=687, Percent_Identity=26.2008733624454, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1787344, Length=767, Percent_Identity=24.5110821382008, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79256; Mature: 79125

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPIQSSATPPRRPAASVAFAMMTCAAAPAAADDTDPRRAPHLSPIVVQGERDTGSRVD
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
RSGSAKYATPLLDVPQTITVVPREVLDEQQVTSLREALSNVAGITFNAGEGGGGSGDMLL
CCCCCCCCCCCCCCCCEEEECCHHHHCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEE
IRGFSAHANLQLDGLRDSAQNNRSDLFNIDAVEVIKGPNSVFGGAGTTGGSVNLISKAPQ
EEECCCCCCEEECCCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCC
RKAFIEAGTVLGTSGYRRATLDANRPLPGSDGSSVFRLNAMAHVNDVPGRNDIRKRRWGV
HHHHHCCCCEECCCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCC
APSLGFGLGTPTRVTLGYFHQYDHNLPDYGLPARNGQVLGGVARDAYFGWRNLDRERIES
CCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHCHHCCCHHHHCC
NTFTVKAEHDVSPQLKLQNLSRYAHLNRDTVVSASHANLDGMPPGRYKPAGPQGYGRDAS
CEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
TAMWMNQTNATGEFSTFGVGHTLVAGFEISRETYARSTYSHGLARHFPKNGYALAAPPGY
EEEEEECCCCCCCCEECCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
WTGPARRENTARTDTALDVKALYAFDTISFGRYWDLDVGLRHDWIDGWARNTPAGKPTER
CCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCEEEECCCCCCHHHCCHHCCCCCCCCCCC
GETSDRHLSTRAGLVFKPTDNGRLYAAYGTSFNPSAEFLVTTGSGVTAASGGLAPEKNES
CCCCCCEEHHCCCEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCEECCCCCCCCCCCC
VELGAKWEGLAGLAVNGALFQTYKHHARERMSDGTYLLAGKQRVRGVELGAAGKITPKWD
EEECCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCCCHH
LFANYTYLASATLDSPSSPRRNGKALGNTPRHAFNLWTTYRLPAGWTIGYGSHFVGRRNV
HEECEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCC
TSEGDGTLGAYWVHNLMASYDVNRRLRFQLNVDNLFDRAYVERVRQQPGNASRSSAVEFG
CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEECC
DGRAAMLSAVYTF
CCHHHHHHHHHCC
>Mature Secondary Structure 
TSPIQSSATPPRRPAASVAFAMMTCAAAPAAADDTDPRRAPHLSPIVVQGERDTGSRVD
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
RSGSAKYATPLLDVPQTITVVPREVLDEQQVTSLREALSNVAGITFNAGEGGGGSGDMLL
CCCCCCCCCCCCCCCCEEEECCHHHHCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEE
IRGFSAHANLQLDGLRDSAQNNRSDLFNIDAVEVIKGPNSVFGGAGTTGGSVNLISKAPQ
EEECCCCCCEEECCCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCC
RKAFIEAGTVLGTSGYRRATLDANRPLPGSDGSSVFRLNAMAHVNDVPGRNDIRKRRWGV
HHHHHCCCCEECCCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCC
APSLGFGLGTPTRVTLGYFHQYDHNLPDYGLPARNGQVLGGVARDAYFGWRNLDRERIES
CCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHCHHCCCHHHHCC
NTFTVKAEHDVSPQLKLQNLSRYAHLNRDTVVSASHANLDGMPPGRYKPAGPQGYGRDAS
CEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
TAMWMNQTNATGEFSTFGVGHTLVAGFEISRETYARSTYSHGLARHFPKNGYALAAPPGY
EEEEEECCCCCCCCEECCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
WTGPARRENTARTDTALDVKALYAFDTISFGRYWDLDVGLRHDWIDGWARNTPAGKPTER
CCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCEEEECCCCCCHHHCCHHCCCCCCCCCCC
GETSDRHLSTRAGLVFKPTDNGRLYAAYGTSFNPSAEFLVTTGSGVTAASGGLAPEKNES
CCCCCCEEHHCCCEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCEECCCCCCCCCCCC
VELGAKWEGLAGLAVNGALFQTYKHHARERMSDGTYLLAGKQRVRGVELGAAGKITPKWD
EEECCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCCCHH
LFANYTYLASATLDSPSSPRRNGKALGNTPRHAFNLWTTYRLPAGWTIGYGSHFVGRRNV
HEECEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCC
TSEGDGTLGAYWVHNLMASYDVNRRLRFQLNVDNLFDRAYVERVRQQPGNASRSSAVEFG
CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEECC
DGRAAMLSAVYTF
CCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]