| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is dtd [H]
Identifier: 161525868
GI number: 161525868
Start: 2947009
End: 2947467
Strand: Reverse
Name: dtd [H]
Synonym: Bmul_2699
Alternate gene names: 161525868
Gene position: 2947467-2947009 (Counterclockwise)
Preceding gene: 161525869
Following gene: 161525867
Centisome position: 85.47
GC content: 71.24
Gene sequence:
>459_bases ATGATCGCGCTGATCCAGCGCGTGAAGCGCGCCGACGTGCGCGTCGGCGAGCGCGTGACGGGCGAGATCGGCGCCGGCCT GCTTGCGCTCGTGTGTGCTGAGCGCGGCGACACCGAGGCCGCGGCCGACAAGCTGCTCGCCAAGGTGCTCGGCTACCGCG TGTTCAGCGACGCGGCCGGCAAGATGAACCTGCCGGTGTCGAATATCGACGGCGCAGGCCGTGCGGGCGGGCTGCTGCTC GTCTCGCAATTCACGCTCGCGGCCGACACCAACAGCGGGCTGCGGCCGAGCTTCACGCCGGCCGCGCCGCCCGACGAGGG CGCGCGGCTGTTCGACTATTTCGTGGCCGCCGCGCGCGCGCGTCACCCGATCGTCGAAACCGGCGAATTCGGCGCCGACA TGCAGGTGTCGCTCGTCAACGACGGCCCCGTGACGTTCTGGCTGCAAGTGCGGCCCTGA
Upstream 100 bases:
>100_bases TCGACGGCACGACGGTGTCCGACAAGGGCCTGAAGGTCGACGCCGGCGAATACGTCGTGCAGGTCGGCAAGCGGCGTTTC GCGCGCGTGACGCTCGCTGC
Downstream 100 bases:
>100_bases TTCCCCGCCGGAGACGCCTCGCGATGGCTACCACCCAGATCCTCTTCATCCGCCATGGCGAAACGGCCTGGAACCGCATC AAGCGGATACAGGGCCACAT
Product: D-tyrosyl-tRNA(Tyr) deacylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MIALIQRVKRADVRVGERVTGEIGAGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAGKMNLPVSNIDGAGRAGGLLL VSQFTLAADTNSGLRPSFTPAAPPDEGARLFDYFVAAARARHPIVETGEFGADMQVSLVNDGPVTFWLQVRP
Sequences:
>Translated_152_residues MIALIQRVKRADVRVGERVTGEIGAGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAGKMNLPVSNIDGAGRAGGLLL VSQFTLAADTNSGLRPSFTPAAPPDEGARLFDYFVAAARARHPIVETGEFGADMQVSLVNDGPVTFWLQVRP >Mature_152_residues MIALIQRVKRADVRVGERVTGEIGAGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAGKMNLPVSNIDGAGRAGGLLL VSQFTLAADTNSGLRPSFTPAAPPDEGARLFDYFVAAARARHPIVETGEFGADMQVSLVNDGPVTFWLQVRP
Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]
COG id: COG1490
COG function: function code J; D-Tyr-tRNAtyr deacylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DTD family [H]
Homologues:
Organism=Homo sapiens, GI30795227, Length=151, Percent_Identity=36.4238410596026, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1790320, Length=150, Percent_Identity=62, Blast_Score=179, Evalue=7e-47, Organism=Caenorhabditis elegans, GI115533292, Length=148, Percent_Identity=37.1621621621622, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319982, Length=150, Percent_Identity=39.3333333333333, Blast_Score=90, Evalue=2e-19, Organism=Drosophila melanogaster, GI281361569, Length=151, Percent_Identity=35.0993377483444, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003732 [H]
Pfam domain/function: PF02580 Tyr_Deacylase [H]
EC number: NA
Molecular weight: Translated: 16024; Mature: 16024
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIALIQRVKRADVRVGERVTGEIGAGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAG CHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC KMNLPVSNIDGAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGARLFDYFVAAARA CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RHPIVETGEFGADMQVSLVNDGPVTFWLQVRP CCCCCCCCCCCCCEEEEEECCCCEEEEEEECC >Mature Secondary Structure MIALIQRVKRADVRVGERVTGEIGAGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAG CHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC KMNLPVSNIDGAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGARLFDYFVAAARA CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RHPIVETGEFGADMQVSLVNDGPVTFWLQVRP CCCCCCCCCCCCCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA