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The map label for this gene is yccZ [C]

Identifier: 161525778

GI number: 161525778

Start: 2840783

End: 2841913

Strand: Reverse

Name: yccZ [C]

Synonym: Bmul_2609

Alternate gene names: 161525778

Gene position: 2841913-2840783 (Counterclockwise)

Preceding gene: 161525779

Following gene: 161525777

Centisome position: 82.41

GC content: 49.07

Gene sequence:

>1131_bases
ATGTGTAAAAAACACAAAATCGTTGATTTTACGATGAAATATAATCATTGTTTGCGTCGCGTTGTATTGCTTTCTGGCCT
ATTCTTCGTGGGCGGGTGTACGGTTTTGTCGGGTGCAGGTCCGCATATAGCTAGTGTTACCTCTGCCCGCAATATGCAAA
ACCCGGAATATCCTTATCAACTGATTGACTTGTCGGCTAGCAATATTGCTCCCTACATGCGTCCGCCAGAAAAACCATTG
ACCGACCATATAGCGCGTCCGCGGGAACCGGAAGTGCGCCTCATGGCAGGTGATGTACTCAGGGTGCTCATTTCGGATGA
CAGTGGTGCAGACAAAACAGTTTTCGCACCGCTTTCGCTCGGAGGAACCGTTTTTGGACAAGTTCGCGTTGATGCAGACG
GTAAAATCACGCTTCCCTATATGGGAACAAAAAGTGTGCGGGGCGCGACTCTGAGTGAGGCCGAGAGCATTATCAGAAGA
GGCGTTCAGGGACGAGCCAGCGAACCGCAGGTGCATGTAGAATTAGTAAGTGATCTGTCTAGATCAGTATTGGTGGCGGG
TGCAGTAAAGAGTCCAGGTCGTTTTTCGGCGCTGCAAGGCCCGTTAACGATTTTAGATGCAATAAATCAGGCCGGTGGAC
CAGTACTTGAACCATATCTAATTAATGTGGTGGTTCGTACCGGAAACGCGGTGAAAAGCTATAATTATCAGGATTTACTT
TCTGGCGGGAACATCACTGTTCCCTCAAATTCCGAAATTATTTTGGAGCGGGCTCGCAAGCGCTTTGTTGCGATGGGAGC
GGTGGGGCAGCCGGGTTTGCACGATTTCCCTTCTTCGACCCCAAGTCTCCTTGAGGTGCTAGGGGCCGTCGGATGGCTGA
ACGAGCGTACGGCGAATCCGGGAGGCGTATTTATATTCCGATTGGAGGACAATGGTGGAACAGCAAAACCGGTGGCACAG
GTATTTCGCCTAAATATGCAAGAGCCCGTATCAATGTTTCTTGCGAAACGATTTTTGGTTCACCCCGACGATACTGTATA
TGTCACCAATGCACCGACTTACGAAATGCAGAAGATTATCGCGCCAATAGTCCAGGTGTTACTATTGGGCAAATATGCGG
ATGGATTTTAA

Upstream 100 bases:

>100_bases
GTACAATCGTTGTGATTTTGCTGCTGGCCTTTGGCGTCACTCGTTTCGTTATCGCGACGATCAACGATCACAAAGATTAA
GAGGATGCGGGATGTTCGGC

Downstream 100 bases:

>100_bases
GGGATTTTGCTATGTCGGACTTGGAGTCTCCATTCAAAGCTAATCGTTCGTCATTGAGAATTGTCCGGTCTGTCTTGTTT
GCCTTATTTTTGCGTGAAAT

Product: polysaccharide export protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MCKKHKIVDFTMKYNHCLRRVVLLSGLFFVGGCTVLSGAGPHIASVTSARNMQNPEYPYQLIDLSASNIAPYMRPPEKPL
TDHIARPREPEVRLMAGDVLRVLISDDSGADKTVFAPLSLGGTVFGQVRVDADGKITLPYMGTKSVRGATLSEAESIIRR
GVQGRASEPQVHVELVSDLSRSVLVAGAVKSPGRFSALQGPLTILDAINQAGGPVLEPYLINVVVRTGNAVKSYNYQDLL
SGGNITVPSNSEIILERARKRFVAMGAVGQPGLHDFPSSTPSLLEVLGAVGWLNERTANPGGVFIFRLEDNGGTAKPVAQ
VFRLNMQEPVSMFLAKRFLVHPDDTVYVTNAPTYEMQKIIAPIVQVLLLGKYADGF

Sequences:

>Translated_376_residues
MCKKHKIVDFTMKYNHCLRRVVLLSGLFFVGGCTVLSGAGPHIASVTSARNMQNPEYPYQLIDLSASNIAPYMRPPEKPL
TDHIARPREPEVRLMAGDVLRVLISDDSGADKTVFAPLSLGGTVFGQVRVDADGKITLPYMGTKSVRGATLSEAESIIRR
GVQGRASEPQVHVELVSDLSRSVLVAGAVKSPGRFSALQGPLTILDAINQAGGPVLEPYLINVVVRTGNAVKSYNYQDLL
SGGNITVPSNSEIILERARKRFVAMGAVGQPGLHDFPSSTPSLLEVLGAVGWLNERTANPGGVFIFRLEDNGGTAKPVAQ
VFRLNMQEPVSMFLAKRFLVHPDDTVYVTNAPTYEMQKIIAPIVQVLLLGKYADGF
>Mature_376_residues
MCKKHKIVDFTMKYNHCLRRVVLLSGLFFVGGCTVLSGAGPHIASVTSARNMQNPEYPYQLIDLSASNIAPYMRPPEKPL
TDHIARPREPEVRLMAGDVLRVLISDDSGADKTVFAPLSLGGTVFGQVRVDADGKITLPYMGTKSVRGATLSEAESIIRR
GVQGRASEPQVHVELVSDLSRSVLVAGAVKSPGRFSALQGPLTILDAINQAGGPVLEPYLINVVVRTGNAVKSYNYQDLL
SGGNITVPSNSEIILERARKRFVAMGAVGQPGLHDFPSSTPSLLEVLGAVGWLNERTANPGGVFIFRLEDNGGTAKPVAQ
VFRLNMQEPVSMFLAKRFLVHPDDTVYVTNAPTYEMQKIIAPIVQVLLLGKYADGF

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=307, Percent_Identity=31.2703583061889, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1788376, Length=366, Percent_Identity=28.9617486338798, Blast_Score=108, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 40653; Mature: 40653

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKKHKIVDFTMKYNHCLRRVVLLSGLFFVGGCTVLSGAGPHIASVTSARNMQNPEYPYQ
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHCCCCCCCCEE
LIDLSASNIAPYMRPPEKPLTDHIARPREPEVRLMAGDVLRVLISDDSGADKTVFAPLSL
EEECCHHCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEEC
GGTVFGQVRVDADGKITLPYMGTKSVRGATLSEAESIIRRGVQGRASEPQVHVELVSDLS
CCEEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
RSVLVAGAVKSPGRFSALQGPLTILDAINQAGGPVLEPYLINVVVRTGNAVKSYNYQDLL
HHEEEEECCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHCCCHHHHH
SGGNITVPSNSEIILERARKRFVAMGAVGQPGLHDFPSSTPSLLEVLGAVGWLNERTANP
CCCCEECCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
GGVFIFRLEDNGGTAKPVAQVFRLNMQEPVSMFLAKRFLVHPDDTVYVTNAPTYEMQKII
CCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHH
APIVQVLLLGKYADGF
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MCKKHKIVDFTMKYNHCLRRVVLLSGLFFVGGCTVLSGAGPHIASVTSARNMQNPEYPYQ
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHCCCCCCCCEE
LIDLSASNIAPYMRPPEKPLTDHIARPREPEVRLMAGDVLRVLISDDSGADKTVFAPLSL
EEECCHHCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEEC
GGTVFGQVRVDADGKITLPYMGTKSVRGATLSEAESIIRRGVQGRASEPQVHVELVSDLS
CCEEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
RSVLVAGAVKSPGRFSALQGPLTILDAINQAGGPVLEPYLINVVVRTGNAVKSYNYQDLL
HHEEEEECCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHCCCHHHHH
SGGNITVPSNSEIILERARKRFVAMGAVGQPGLHDFPSSTPSLLEVLGAVGWLNERTANP
CCCCEECCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
GGVFIFRLEDNGGTAKPVAQVFRLNMQEPVSMFLAKRFLVHPDDTVYVTNAPTYEMQKII
CCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHH
APIVQVLLLGKYADGF
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]