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The map label for this gene is kpsM [H]

Identifier: 161525777

GI number: 161525777

Start: 2839956

End: 2840564

Strand: Reverse

Name: kpsM [H]

Synonym: Bmul_2608

Alternate gene names: 161525777

Gene position: 2840564-2839956 (Counterclockwise)

Preceding gene: 161525778

Following gene: 161525776

Centisome position: 82.37

GC content: 43.35

Gene sequence:

>609_bases
ATGGACTATGTAATGTTTCTAGTCAGCGGAATCGTGCCGTTTCATATGATGAGAAATATTGCTTGGAGAATAACGGACTC
AATACAAGCTAATCAAGGACTATTCGCATATCGACAGGTTGCGCCTTTTGATACGTTTGTCGCGCGTCTAATCGTCGAGC
TTTGTACGTATTCATGTGCCTACTTAATTATATGTTTTTTCTTGGGATTTTGGTTTGACCACGATGTTTTGATAAGTGAT
CCATTGGCATGGCTTTGGGCAATTGGTGTTGGCGTCTTTTTGTCATTCTGGTTTGGTGTTGCTTTTGCAATTATTGCGCA
CTCTATTCCGGGGGCGGCCCGTGTTTGTAAGCTATCCTTTATCCCTCTGTACATTACATCGGGAATATTTTTCCCAATAT
GGAATATGCCGGAGAGGGAGATCTATTTTTTCTCGTGGAATCCATATGTCGAAGTGGTGGATGGCATTCGTGCCGCGGTC
TTCGATAATTATCCAGTCACGAAAGGCCTGAACTATAATTATCCGCTCGGTTTTGCGATGGTGCTGGCATTTTTTGTTAT
GGTTGCGTATAGACGTCAGCGTCAGGCCTTACGGTCAATTAAGGTGTAG

Upstream 100 bases:

>100_bases
AAGGCGAATGGGGTTTGCTTGGGTGATCTTTGAGCCGCTGGCTATTCTGGTAATCATCTTGACGTTCCATGCGATGCTTC
GAGCAACGAGGATGCAAAGC

Downstream 100 bases:

>100_bases
GCCATGATTAAATTGGAAAAATTGACGAAGTCTTATGTGACAAAGCAGGGTCGGAAATATATATTTCGCGATCTCTCATT
TGTCGTTCCGCCAGACAAAA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDYVMFLVSGIVPFHMMRNIAWRITDSIQANQGLFAYRQVAPFDTFVARLIVELCTYSCAYLIICFFLGFWFDHDVLISD
PLAWLWAIGVGVFLSFWFGVAFAIIAHSIPGAARVCKLSFIPLYITSGIFFPIWNMPEREIYFFSWNPYVEVVDGIRAAV
FDNYPVTKGLNYNYPLGFAMVLAFFVMVAYRRQRQALRSIKV

Sequences:

>Translated_202_residues
MDYVMFLVSGIVPFHMMRNIAWRITDSIQANQGLFAYRQVAPFDTFVARLIVELCTYSCAYLIICFFLGFWFDHDVLISD
PLAWLWAIGVGVFLSFWFGVAFAIIAHSIPGAARVCKLSFIPLYITSGIFFPIWNMPEREIYFFSWNPYVEVVDGIRAAV
FDNYPVTKGLNYNYPLGFAMVLAFFVMVAYRRQRQALRSIKV
>Mature_202_residues
MDYVMFLVSGIVPFHMMRNIAWRITDSIQANQGLFAYRQVAPFDTFVARLIVELCTYSCAYLIICFFLGFWFDHDVLISD
PLAWLWAIGVGVFLSFWFGVAFAIIAHSIPGAARVCKLSFIPLYITSGIFFPIWNMPEREIYFFSWNPYVEVVDGIRAAV
FDNYPVTKGLNYNYPLGFAMVLAFFVMVAYRRQRQALRSIKV

Specific function: KpsM and kpsT constitute a system for the transport of polysialic acid across the cytoplasmic membrane [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 23345; Mature: 23345

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYVMFLVSGIVPFHMMRNIAWRITDSIQANQGLFAYRQVAPFDTFVARLIVELCTYSCA
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
YLIICFFLGFWFDHDVLISDPLAWLWAIGVGVFLSFWFGVAFAIIAHSIPGAARVCKLSF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IPLYITSGIFFPIWNMPEREIYFFSWNPYVEVVDGIRAAVFDNYPVTKGLNYNYPLGFAM
HHHHHHCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
VLAFFVMVAYRRQRQALRSIKV
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDYVMFLVSGIVPFHMMRNIAWRITDSIQANQGLFAYRQVAPFDTFVARLIVELCTYSCA
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
YLIICFFLGFWFDHDVLISDPLAWLWAIGVGVFLSFWFGVAFAIIAHSIPGAARVCKLSF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IPLYITSGIFFPIWNMPEREIYFFSWNPYVEVVDGIRAAVFDNYPVTKGLNYNYPLGFAM
HHHHHHCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
VLAFFVMVAYRRQRQALRSIKV
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1856162; 7715449 [H]