| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is ycgM [C]
Identifier: 161525625
GI number: 161525625
Start: 2668951
End: 2669829
Strand: Reverse
Name: ycgM [C]
Synonym: Bmul_2455
Alternate gene names: 161525625
Gene position: 2669829-2668951 (Counterclockwise)
Preceding gene: 161525626
Following gene: 161525622
Centisome position: 77.42
GC content: 62.0
Gene sequence:
>879_bases ATGGCGACGGCCATCACCTATTTTTACGGAGAACGTATGAAACTGTGTCGATATGGTAATCCCGGTGAAGAAAAGCCCGG CCTCGTCGATGAACGCGGACAGATCCGCGACCTGTCGGGCCACCTGGACGACATCGGCCCCGCGAATCTGTCGCGGCAAG CCTTGCAACTGCTGCGCGACATCCGCCTCGACGAACTTCCGATCGTGAGCGGCACGCCGCGTCTGGGCACACCGCTGAAG GGCACCTCCAAGTTCCTCGCGATCGGCCTCAACTATGTCGATCATGCGGAGGAAGCGAACCTGCCGATTCCCGATGAACC GGTGATGTTCATGAAGGCGATCAGCTGCATCACGGGACCGTCCGACGACATCATCCGCCCGCGCGGCGCAACCAAGCTCG ATTGGGAAGTGGAGCTCGGCGTCGTGATCGGCGAGAAGGCGCAATACGTCGACGAAGCCGATGCGCTCGAGTACGTGGCC GGGTATTGCGTGGTGAACGATGTGTCGGAGCGCGACTACCAGTTGCAGTCGTCGCAATGGGCCAAGGGCAAGGGCTGCGA TACGTTCGGCCCGATCGGCCCGTGGCTCGTCACGCGCGATGAAGTCCCCGATCCGCAGAATCTCGGCCTGTGGCTCGAAG TCAACGGCAAGCGCATGCAGCACAGCAATACGAGCGGGATGATTTTCCCGGTGGCGAAACTGGTCGCCTATTTGAGCCGT TATATGACGCTGTATCCCGGCGACGTGATTGCAACCGGCACGCCGGCTGGTGTCGGCCTCTGGGCGAGTCCGCCGGTGTT CCTGCAGCCCGGCGACACGATGCGGGTGGGGATCGACGGACTCGGCGTGCAGACGCAAACCGTGAAATCGTCGGACTGA
Upstream 100 bases:
>100_bases TGGGTCGATTCGCCGGGAACCTGCGTGGCCGGAACCGCGAATATCGTTCGCGCGTTCCGATGCCTTGACAGATCCGTCGG TCCGACTCGCCCTAACCGTG
Downstream 100 bases:
>100_bases TGCGACGCGGCTGTGCCGGACGGGCAGGCGGCGGTAGGCGGGGCGAAGATGTTTCGCCGGCGCCTGCGCCACCGCTTGCC CGCCGCGGTCCTCGTCGTCA
Product: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase
Products: NA
Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MATAITYFYGERMKLCRYGNPGEEKPGLVDERGQIRDLSGHLDDIGPANLSRQALQLLRDIRLDELPIVSGTPRLGTPLK GTSKFLAIGLNYVDHAEEANLPIPDEPVMFMKAISCITGPSDDIIRPRGATKLDWEVELGVVIGEKAQYVDEADALEYVA GYCVVNDVSERDYQLQSSQWAKGKGCDTFGPIGPWLVTRDEVPDPQNLGLWLEVNGKRMQHSNTSGMIFPVAKLVAYLSR YMTLYPGDVIATGTPAGVGLWASPPVFLQPGDTMRVGIDGLGVQTQTVKSSD
Sequences:
>Translated_292_residues MATAITYFYGERMKLCRYGNPGEEKPGLVDERGQIRDLSGHLDDIGPANLSRQALQLLRDIRLDELPIVSGTPRLGTPLK GTSKFLAIGLNYVDHAEEANLPIPDEPVMFMKAISCITGPSDDIIRPRGATKLDWEVELGVVIGEKAQYVDEADALEYVA GYCVVNDVSERDYQLQSSQWAKGKGCDTFGPIGPWLVTRDEVPDPQNLGLWLEVNGKRMQHSNTSGMIFPVAKLVAYLSR YMTLYPGDVIATGTPAGVGLWASPPVFLQPGDTMRVGIDGLGVQTQTVKSSD >Mature_291_residues ATAITYFYGERMKLCRYGNPGEEKPGLVDERGQIRDLSGHLDDIGPANLSRQALQLLRDIRLDELPIVSGTPRLGTPLKG TSKFLAIGLNYVDHAEEANLPIPDEPVMFMKAISCITGPSDDIIRPRGATKLDWEVELGVVIGEKAQYVDEADALEYVAG YCVVNDVSERDYQLQSSQWAKGKGCDTFGPIGPWLVTRDEVPDPQNLGLWLEVNGKRMQHSNTSGMIFPVAKLVAYLSRY MTLYPGDVIATGTPAGVGLWASPPVFLQPGDTMRVGIDGLGVQTQTVKSSD
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAH family [H]
Homologues:
Organism=Homo sapiens, GI156231349, Length=208, Percent_Identity=48.0769230769231, Blast_Score=218, Evalue=6e-57, Organism=Homo sapiens, GI40786394, Length=208, Percent_Identity=48.0769230769231, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI13654274, Length=212, Percent_Identity=35.8490566037736, Blast_Score=134, Evalue=9e-32, Organism=Homo sapiens, GI66348062, Length=201, Percent_Identity=36.81592039801, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI215422413, Length=201, Percent_Identity=36.81592039801, Blast_Score=134, Evalue=1e-31, Organism=Escherichia coli, GI1787428, Length=210, Percent_Identity=34.2857142857143, Blast_Score=123, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17557057, Length=180, Percent_Identity=38.8888888888889, Blast_Score=137, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6324161, Length=234, Percent_Identity=28.2051282051282, Blast_Score=93, Evalue=4e-20, Organism=Drosophila melanogaster, GI28572127, Length=207, Percent_Identity=46.3768115942029, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24663695, Length=218, Percent_Identity=39.9082568807339, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI28571789, Length=216, Percent_Identity=37.037037037037, Blast_Score=142, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.3.2.3 [H]
Molecular weight: Translated: 31885; Mature: 31754
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAITYFYGERMKLCRYGNPGEEKPGLVDERGQIRDLSGHLDDIGPANLSRQALQLLRD CCEEEEEEECCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHH IRLDELPIVSGTPRLGTPLKGTSKFLAIGLNYVDHAEEANLPIPDEPVMFMKAISCITGP CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHCCC SDDIIRPRGATKLDWEVELGVVIGEKAQYVDEADALEYVAGYCVVNDVSERDYQLQSSQW CCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCC AKGKGCDTFGPIGPWLVTRDEVPDPQNLGLWLEVNGKRMQHSNTSGMIFPVAKLVAYLSR CCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCEEECCCCCCEEHHHHHHHHHHHH YMTLYPGDVIATGTPAGVGLWASPPVFLQPGDTMRVGIDGLGVQTQTVKSSD HHEECCCCEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEEECCCCC >Mature Secondary Structure ATAITYFYGERMKLCRYGNPGEEKPGLVDERGQIRDLSGHLDDIGPANLSRQALQLLRD CEEEEEEECCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHH IRLDELPIVSGTPRLGTPLKGTSKFLAIGLNYVDHAEEANLPIPDEPVMFMKAISCITGP CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHCCC SDDIIRPRGATKLDWEVELGVVIGEKAQYVDEADALEYVAGYCVVNDVSERDYQLQSSQW CCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCC AKGKGCDTFGPIGPWLVTRDEVPDPQNLGLWLEVNGKRMQHSNTSGMIFPVAKLVAYLSR CCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCEEECCCCCCEEHHHHHHHHHHHH YMTLYPGDVIATGTPAGVGLWASPPVFLQPGDTMRVGIDGLGVQTQTVKSSD HHEECCCCEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA