| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161525600
Identifier: 161525600
GI number: 161525600
Start: 2643608
End: 2644855
Strand: Reverse
Name: 161525600
Synonym: Bmul_2430
Alternate gene names: NA
Gene position: 2644855-2643608 (Counterclockwise)
Preceding gene: 161525604
Following gene: 161525599
Centisome position: 76.7
GC content: 65.62
Gene sequence:
>1248_bases ATGAAAGTTCGCTCGATCATGGGCGCGCTCTGCGCCGCAGGTCTGATGGCCGGCGCGATGGCGGCGCAGGCGGCCGAGAA CGTCACGGTGCTGCACTGGTGGACTTCGGGCGGCGAGTCGAAGGCCGTCGGCGTGCTGAAGGACGACCTGCAGAAGCAGG GCTACGTGTGGAAGGACTTCGCGGTCGCGGGCGGTGCGGGTGCAGCGGCGATGACGGCGCTGAAGACCAAGGTGATCAGC GGCGATGCGCCGTCGGCGGCGCAGATCAAGGGCCCGCTGATTCAGGACTGGGCCGATCAGGGCGTGCTCGTGAACATCGA TTCGGTCGCCGGCGACTGGAAGCAGAACCTGCCGCCGGAGATCGACAAGATCATGAAGTACAAGGGCCATTACGTCGCCG CGCCGTTCTCGGTGCACCGCGTGAACTGGCTCTACATCAACAAGGCCGCGCTCGACAAGGTCGGCGCGAAGGTGCCGACC ACCTGGCCCGAGTTCTTCGCGGTCGCCGACAAGCTCAAGGCCGCCGGCATCCAGCCGGTCGCGATGGGCGGCCAGCCGTG GCAGGACCTGACGCTGTGGGAAGACGTCGTGCTGTCGCAGGGTGCCGCGTTCTACAAGAAGGCGCTCGTCGATCTCGACC AGGCGACGCTGACGTCGCCGCAGATGGTGTCGGTGTTCGACACCGTGCGCAAGATCCAGGGTTATTTCGACGCGGGCCGT AACGGCCGCGACTGGAACCTCGCGACCGCGATGGTCATCAACGGCAAGGCCGGCATGCAGTTCATGGGCGACTGGGCGAA GGGCGAGTTCGAGAACGCGGGCAAGAAGGCGGGCAAGGACTACATCTGCGCGCCGGTGCCGGGCACGAGCAACGCGTACA CGTTCAACGTCGACTCGTTCGTGTTCTTCCAGCAGAAGGGGCAGAAGGCAGCGACGCCGGGCCAGCTCGCGCTCGCGAAG ACGATCATGACGCCCGAATTCCAGGAGCAGTTCAGCCTGCTGAAGGGTTCGATTCCGGTGCGCCTCGGCGTGAAGATGGA CAAGTTCGACGACTGCGCGAAGAAGTCGTATGCCGACGAGCAGACCGCGCTGAAGGCCGGCGGCTACGTGCCGTCGCTCG CGCACGGGATGGCGCAGGGCGATGCGACGGCCGGTGCGATCACCGACGTCGTGACGAAGTTCATGAACTCGCAGCAGGAT TCGAAGAGCGCGGTGGCGGCGCTCGCGAAAGCCGCGAAGGTGAAGTAA
Upstream 100 bases:
>100_bases ACGCGCCATGCGTCTCGCGGCTCGATTTCCCCGTCGTTATCAAGAAGCCGTTCCCGCTGAGGGAACTTCACGAGTTGATT CAGTCTGGAGGAGATAAGGA
Downstream 100 bases:
>100_bases TGCCGTAGCGCGACGGGCGCCCGCCGGCTGCGCTGGCCGCCGGGCGTTCCGCCAGCGCTGCAAACGGGCGCGTCCGCGCG CCCGTGCCGTATCGGACGCC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Immunogenic 39 kDa protein; P39 [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKVRSIMGALCAAGLMAGAMAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDFAVAGGAGAAAMTALKTKVIS GDAPSAAQIKGPLIQDWADQGVLVNIDSVAGDWKQNLPPEIDKIMKYKGHYVAAPFSVHRVNWLYINKAALDKVGAKVPT TWPEFFAVADKLKAAGIQPVAMGGQPWQDLTLWEDVVLSQGAAFYKKALVDLDQATLTSPQMVSVFDTVRKIQGYFDAGR NGRDWNLATAMVINGKAGMQFMGDWAKGEFENAGKKAGKDYICAPVPGTSNAYTFNVDSFVFFQQKGQKAATPGQLALAK TIMTPEFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADEQTALKAGGYVPSLAHGMAQGDATAGAITDVVTKFMNSQQD SKSAVAALAKAAKVK
Sequences:
>Translated_415_residues MKVRSIMGALCAAGLMAGAMAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDFAVAGGAGAAAMTALKTKVIS GDAPSAAQIKGPLIQDWADQGVLVNIDSVAGDWKQNLPPEIDKIMKYKGHYVAAPFSVHRVNWLYINKAALDKVGAKVPT TWPEFFAVADKLKAAGIQPVAMGGQPWQDLTLWEDVVLSQGAAFYKKALVDLDQATLTSPQMVSVFDTVRKIQGYFDAGR NGRDWNLATAMVINGKAGMQFMGDWAKGEFENAGKKAGKDYICAPVPGTSNAYTFNVDSFVFFQQKGQKAATPGQLALAK TIMTPEFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADEQTALKAGGYVPSLAHGMAQGDATAGAITDVVTKFMNSQQD SKSAVAALAKAAKVK >Mature_415_residues MKVRSIMGALCAAGLMAGAMAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDFAVAGGAGAAAMTALKTKVIS GDAPSAAQIKGPLIQDWADQGVLVNIDSVAGDWKQNLPPEIDKIMKYKGHYVAAPFSVHRVNWLYINKAALDKVGAKVPT TWPEFFAVADKLKAAGIQPVAMGGQPWQDLTLWEDVVLSQGAAFYKKALVDLDQATLTSPQMVSVFDTVRKIQGYFDAGR NGRDWNLATAMVINGKAGMQFMGDWAKGEFENAGKKAGKDYICAPVPGTSNAYTFNVDSFVFFQQKGQKAATPGQLALAK TIMTPEFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADEQTALKAGGYVPSLAHGMAQGDATAGAITDVVTKFMNSQQD SKSAVAALAKAAKVK
Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 44275; Mature: 44275
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRSIMGALCAAGLMAGAMAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDF CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEHHHHHHHHHCCCEEEEH AVAGGAGAAAMTALKTKVISGDAPSAAQIKGPLIQDWADQGVLVNIDSVAGDWKQNLPPE EECCCCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCCEEEEEHHHCCCHHHCCCHH IDKIMKYKGHYVAAPFSVHRVNWLYINKAALDKVGAKVPTTWPEFFAVADKLKAAGIQPV HHHHHHHCCCEEECCCEEEEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEE AMGGQPWQDLTLWEDVVLSQGAAFYKKALVDLDQATLTSPQMVSVFDTVRKIQGYFDAGR ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC NGRDWNLATAMVINGKAGMQFMGDWAKGEFENAGKKAGKDYICAPVPGTSNAYTFNVDSF CCCCCCEEEEEEEECCCCCHHHCCCCCCCHHHHHHHCCCCEEEECCCCCCCEEEEECCEE VFFQQKGQKAATPGQLALAKTIMTPEFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADE EEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCH QTALKAGGYVPSLAHGMAQGDATAGAITDVVTKFMNSQQDSKSAVAALAKAAKVK HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKVRSIMGALCAAGLMAGAMAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDF CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEHHHHHHHHHCCCEEEEH AVAGGAGAAAMTALKTKVISGDAPSAAQIKGPLIQDWADQGVLVNIDSVAGDWKQNLPPE EECCCCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCCEEEEEHHHCCCHHHCCCHH IDKIMKYKGHYVAAPFSVHRVNWLYINKAALDKVGAKVPTTWPEFFAVADKLKAAGIQPV HHHHHHHCCCEEECCCEEEEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEE AMGGQPWQDLTLWEDVVLSQGAAFYKKALVDLDQATLTSPQMVSVFDTVRKIQGYFDAGR ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC NGRDWNLATAMVINGKAGMQFMGDWAKGEFENAGKKAGKDYICAPVPGTSNAYTFNVDSF CCCCCCEEEEEEEECCCCCHHHCCCCCCCHHHHHHHCCCCEEEECCCCCCCEEEEECCEE VFFQQKGQKAATPGQLALAKTIMTPEFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADE EEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCH QTALKAGGYVPSLAHGMAQGDATAGAITDVVTKFMNSQQDSKSAVAALAKAAKVK HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9009303; 10235622 [H]