| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161525459
Identifier: 161525459
GI number: 161525459
Start: 2501273
End: 2502823
Strand: Direct
Name: 161525459
Synonym: Bmul_2289
Alternate gene names: NA
Gene position: 2501273-2502823 (Clockwise)
Preceding gene: 161525458
Following gene: 161525460
Centisome position: 72.53
GC content: 66.54
Gene sequence:
>1551_bases ATGCCGGCACATCGGATGAGCATGCGCAAACTGAAGGAAGTACTGCGGCTGAAGTGGGCGTGCGGCCTGTCGCACCGCCA GATCAGCCGCGCGATCGGCATCAGCGTCGGCGCCATCTCGGCATACGCCGCCCGCGCGAGCGCGGCGGGCCTCGACTGGG CTACCGTCGAACCGCTCGCCGACGACGAGCTCGAGATCAGGTTGGACCTGCCGGAGGAAACCGCGGTCCCGACCCGCCGG GTCGAACCGGATTACGCGGCGATGCACCGCGACCTGCGCCGCAAGGGCGTGACGCTGCAACTGCTCTGGGAGGAGTACGT CGAGGCTCACCCAGGCCAACGCACCTATCGCTATACGCAGTTCTGCCAGCGGTACAAGGACTGGGCTGCGGCGCTGAAGC GCTCGATGCGCCAGCAACACCGCGCCGGCGAGAAGCTGTTCGCCGACTTCGCCGGGCAAACTGTGCCGATCCTCGGTCGC GACGGCGGCATCGCGTTCAAGGCTCACGTGTTCGTGGCCGTCCTCGGCGCCTCGAACTACACCTATGCATGTGCGACGCG TTCGGAGGCCATGCCCGACTGGATCGGCAGCCTGATCGACGCGTTGGAATTCTACGGCGGTGTCCCCGAGCTGCTGGTGC CCGACAACCCCAAGGCATTGATCGCCAAGGCGGACCGGTACGAACCGGTGCTGGGCAACACCACGCAGGACTTCGTGAAC CACTACGCGACCGCCATGTTGCCGGCGCGGCCGCGCAAGCCGCAGGACAAGGCGAAGGTCGAGGTCGGCGTGCAGATCGT CGAGCGCTGGATCCTCGCACGGCTGCGCAACCACCGCTTCTACAGCCTGGCCGAGCTGAACAAGGCGATCGGCAAGCTGA TCACCGACCTGAACCGGCGTCCGTTCAAGAAGCTCGACGGCAACCGCCGCGAATGGTTCGAGCGGCTAGACCGCCCGGCG CTGCGCCCGTTGCCGACACGCCGATACGAGATCGCGACCTTCGTGAAGTGCCGCGTCAACATCGACTACCACGTCGAAGT CGATCACCACTATTACAGCGTCCCGCACAGCCTCGTGCGCCAGGAAGTCTATGCCCGCGTGACGCGCCACGGCGTCGAGA TCTTGCACCGCGGCAAGCGCGTTGCCGCCCACGCCCGCAGCCGACTCCGGAACAAGCATACGACGTTGCCTGAGCATATG CCGGCGGCGCACCGCGCCCACATGGAATGGACGCCAGGCCGGTTGTTGAACTGGGGCGCCTCGGTCGGTCCCGGTGCCGA GGCGATCGTCAAACATCTGTTGACCAACCGGCCCCATCCCGAGATGGGGTACCGTGCCTGTCTCGGACTGCTGTCGCTCT CGCGCAAGTACGGCAAGGAACGGCTGGAAGCCGCCTGCCAGCGGGCGCTCGTGATCGGCTCACCGACCCGCCGCTCCGTG CTGTCGATCCTCGAATCCGGCCTGGACCGACAGCCGATGCTCCCGATTCCGCCCGCCGAATGGCATTCGCCCGATCACGA GAACGTGCGCGGGCCCGAGTATTACCACTGA
Upstream 100 bases:
>100_bases TCACGCGACCGAAACGGGATAGCCGTTCCGGCTCGGCGGTGGTGTTGCGCATGTGATCAACGACGGGCGTTAGCCTTGAT CCTTTTTAGGGGACAGGTTG
Downstream 100 bases:
>100_bases CCCAAGGAGGTCGCAATGTTGATGCAGCAAACCTTAACCCAGCTCAAGTCCCTGAAGCTCGACGGCATGGCCCGCGCGTT CGAGGAACAAACGGCGTTGA
Product: integrase catalytic region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MPAHRMSMRKLKEVLRLKWACGLSHRQISRAIGISVGAISAYAARASAAGLDWATVEPLADDELEIRLDLPEETAVPTRR VEPDYAAMHRDLRRKGVTLQLLWEEYVEAHPGQRTYRYTQFCQRYKDWAAALKRSMRQQHRAGEKLFADFAGQTVPILGR DGGIAFKAHVFVAVLGASNYTYACATRSEAMPDWIGSLIDALEFYGGVPELLVPDNPKALIAKADRYEPVLGNTTQDFVN HYATAMLPARPRKPQDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIGKLITDLNRRPFKKLDGNRREWFERLDRPA LRPLPTRRYEIATFVKCRVNIDYHVEVDHHYYSVPHSLVRQEVYARVTRHGVEILHRGKRVAAHARSRLRNKHTTLPEHM PAAHRAHMEWTPGRLLNWGASVGPGAEAIVKHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGSPTRRSV LSILESGLDRQPMLPIPPAEWHSPDHENVRGPEYYH
Sequences:
>Translated_516_residues MPAHRMSMRKLKEVLRLKWACGLSHRQISRAIGISVGAISAYAARASAAGLDWATVEPLADDELEIRLDLPEETAVPTRR VEPDYAAMHRDLRRKGVTLQLLWEEYVEAHPGQRTYRYTQFCQRYKDWAAALKRSMRQQHRAGEKLFADFAGQTVPILGR DGGIAFKAHVFVAVLGASNYTYACATRSEAMPDWIGSLIDALEFYGGVPELLVPDNPKALIAKADRYEPVLGNTTQDFVN HYATAMLPARPRKPQDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIGKLITDLNRRPFKKLDGNRREWFERLDRPA LRPLPTRRYEIATFVKCRVNIDYHVEVDHHYYSVPHSLVRQEVYARVTRHGVEILHRGKRVAAHARSRLRNKHTTLPEHM PAAHRAHMEWTPGRLLNWGASVGPGAEAIVKHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGSPTRRSV LSILESGLDRQPMLPIPPAEWHSPDHENVRGPEYYH >Mature_515_residues PAHRMSMRKLKEVLRLKWACGLSHRQISRAIGISVGAISAYAARASAAGLDWATVEPLADDELEIRLDLPEETAVPTRRV EPDYAAMHRDLRRKGVTLQLLWEEYVEAHPGQRTYRYTQFCQRYKDWAAALKRSMRQQHRAGEKLFADFAGQTVPILGRD GGIAFKAHVFVAVLGASNYTYACATRSEAMPDWIGSLIDALEFYGGVPELLVPDNPKALIAKADRYEPVLGNTTQDFVNH YATAMLPARPRKPQDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIGKLITDLNRRPFKKLDGNRREWFERLDRPAL RPLPTRRYEIATFVKCRVNIDYHVEVDHHYYSVPHSLVRQEVYARVTRHGVEILHRGKRVAAHARSRLRNKHTTLPEHMP AAHRAHMEWTPGRLLNWGASVGPGAEAIVKHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGSPTRRSVL SILESGLDRQPMLPIPPAEWHSPDHENVRGPEYYH
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG4584
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017895 - InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 58868; Mature: 58737
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAHRMSMRKLKEVLRLKWACGLSHRQISRAIGISVGAISAYAARASAAGLDWATVEPLA CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC DDELEIRLDLPEETAVPTRRVEPDYAAMHRDLRRKGVTLQLLWEEYVEAHPGQRTYRYTQ CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCHHHHHH FCQRYKDWAAALKRSMRQQHRAGEKLFADFAGQTVPILGRDGGIAFKAHVFVAVLGASNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHEEEHHEECCCCC TYACATRSEAMPDWIGSLIDALEFYGGVPELLVPDNPKALIAKADRYEPVLGNTTQDFVN EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCCCCCCCCCHHHHHH HYATAMLPARPRKPQDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIGKLITDLNRR HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PFKKLDGNRREWFERLDRPALRPLPTRRYEIATFVKCRVNIDYHVEVDHHYYSVPHSLVR CHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEEEEEEEEECCHHHHCCHHHHH QEVYARVTRHGVEILHRGKRVAAHARSRLRNKHTTLPEHMPAAHRAHMEWTPGRLLNWGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCHHHHCCC SVGPGAEAIVKHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGSPTRRSV CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LSILESGLDRQPMLPIPPAEWHSPDHENVRGPEYYH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAHRMSMRKLKEVLRLKWACGLSHRQISRAIGISVGAISAYAARASAAGLDWATVEPLA CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC DDELEIRLDLPEETAVPTRRVEPDYAAMHRDLRRKGVTLQLLWEEYVEAHPGQRTYRYTQ CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCHHHHHH FCQRYKDWAAALKRSMRQQHRAGEKLFADFAGQTVPILGRDGGIAFKAHVFVAVLGASNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHEEEHHEECCCCC TYACATRSEAMPDWIGSLIDALEFYGGVPELLVPDNPKALIAKADRYEPVLGNTTQDFVN EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCCCCCCCCCHHHHHH HYATAMLPARPRKPQDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIGKLITDLNRR HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PFKKLDGNRREWFERLDRPALRPLPTRRYEIATFVKCRVNIDYHVEVDHHYYSVPHSLVR CHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEEEEEEEEECCHHHHCCHHHHH QEVYARVTRHGVEILHRGKRVAAHARSRLRNKHTTLPEHMPAAHRAHMEWTPGRLLNWGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCHHHHCCC SVGPGAEAIVKHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGSPTRRSV CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LSILESGLDRQPMLPIPPAEWHSPDHENVRGPEYYH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]