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The map label for this gene is (hspc4-1 [H]

Identifier: 161525457

GI number: 161525457

Start: 2499193

End: 2499762

Strand: Direct

Name: (hspc4-1 [H]

Synonym: Bmul_2287

Alternate gene names: 161525457

Gene position: 2499193-2499762 (Clockwise)

Preceding gene: 161525456

Following gene: 161525458

Centisome position: 72.47

GC content: 60.35

Gene sequence:

>570_bases
ATGGACATTGATTTCAAGAAATTGGCTCCCTGGAACTGGTTCAAAAAGGAGCAGGAAGAACAACAGAGCGCTGCCTCGCT
GCCGGTGCAGCGCTATGACCTGCCGGTGGCAGGCGGGCCGGTCAGCCCCATCCTGCAATTGCATCGCGAGATCGACCGCC
TGTTCGACGACGCGCTTCGAGGCTTCGGCTTTCCGGCGCTGGCCATGCCGCGATGGCCGTCGGACTGGCCGGGCATGGTG
AAGCCGGCACTTGACATCCAGGAAACCGACAAGCAGTACAAGATCGCCCTGGAAGTACCCGGCGTCGAGGAAAAAGACAT
CCAGATCACGCTCGACAACGACGTGCTGCTGGTACGGGGCGAGAAGCGCCAGGAGCAGGAAAAGAAGGAAGGTGGCTTCC
ATCGCATCGAACGCTCCTACGGCAGTTTCCAGCGTGCCCTGAACCTGCCTGACAACGCCGACCAGGAATCGATCAAGGCC
GCATTCAAGAATGGCGTGCTCACGATCACGATGGACAAGCGCGAGGCCAGTACGCCCAAGCAGGGGCGCTCGATCCCGAT
CAATGGCTGA

Upstream 100 bases:

>100_bases
CAAAGTCAGCGGAACACTCCGTGTCGTCTGGGCGCGCTATCCATAGCCGCAGGCAAACGGAGTGAGCGAGAGTCTTCAAT
TTTTCTTCTGGAGGTGTGAC

Downstream 100 bases:

>100_bases
CGCTGGTCGGCTCGCTTTTCTCAAAACCACAAAAGGATGAGGCTTCGTGATCGGCGGCGTCTCATCAAATCCATCTTTAC
AGGAGCATCAGCATGGCCAG

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MDIDFKKLAPWNWFKKEQEEQQSAASLPVQRYDLPVAGGPVSPILQLHREIDRLFDDALRGFGFPALAMPRWPSDWPGMV
KPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLLVRGEKRQEQEKKEGGFHRIERSYGSFQRALNLPDNADQESIKA
AFKNGVLTITMDKREASTPKQGRSIPING

Sequences:

>Translated_189_residues
MDIDFKKLAPWNWFKKEQEEQQSAASLPVQRYDLPVAGGPVSPILQLHREIDRLFDDALRGFGFPALAMPRWPSDWPGMV
KPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLLVRGEKRQEQEKKEGGFHRIERSYGSFQRALNLPDNADQESIKA
AFKNGVLTITMDKREASTPKQGRSIPING
>Mature_189_residues
MDIDFKKLAPWNWFKKEQEEQQSAASLPVQRYDLPVAGGPVSPILQLHREIDRLFDDALRGFGFPALAMPRWPSDWPGMV
KPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLLVRGEKRQEQEKKEGGFHRIERSYGSFQRALNLPDNADQESIKA
AFKNGVLTITMDKREASTPKQGRSIPING

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 21486; Mature: 21486

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDFKKLAPWNWFKKEQEEQQSAASLPVQRYDLPVAGGPVSPILQLHREIDRLFDDALR
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GFGFPALAMPRWPSDWPGMVKPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLLVRG
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEC
EKRQEQEKKEGGFHRIERSYGSFQRALNLPDNADQESIKAAFKNGVLTITMDKREASTPK
CHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCC
QGRSIPING
CCCCCCCCC
>Mature Secondary Structure
MDIDFKKLAPWNWFKKEQEEQQSAASLPVQRYDLPVAGGPVSPILQLHREIDRLFDDALR
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GFGFPALAMPRWPSDWPGMVKPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLLVRG
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEC
EKRQEQEKKEGGFHRIERSYGSFQRALNLPDNADQESIKAAFKNGVLTITMDKREASTPK
CHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCC
QGRSIPING
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA