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The map label for this gene is dadA [H]

Identifier: 161525410

GI number: 161525410

Start: 2453444

End: 2454730

Strand: Direct

Name: dadA [H]

Synonym: Bmul_2240

Alternate gene names: 161525410

Gene position: 2453444-2454730 (Clockwise)

Preceding gene: 161525408

Following gene: 161525416

Centisome position: 71.15

GC content: 67.83

Gene sequence:

>1287_bases
ATGCGAGTCGTCATTCTGGGCAGCGGTGTGGTGGGCGTGGCAAGCGCGTATTACCTCGCGCGCGCCGGTCATGAGGTCAC
GGTGATCGACCGGGAAGCCGGCCCGGCGCTCGAGACGAGCTTCGCGAATGCCGGCCAGATCTCGCCCGGCTATGCGGCGC
CGTGGGCCGCGCCCGGCGTGCCGCTGAAGGCCGTCAAGTGGATGTTCGAAAAGCATGCGCCGCTCGCGATCCGCCTCGAC
GGCACGCGCTTCCAGCTCCAGTGGATGTGGCAGATGCTGCGCAACTGCACGCCCGAGCGCTATGCGGTCAACAAGAGCCG
TATGGTGCGCCTTGCCGAATACAGCCGCGACTGCCTGCAGGCGCTGCGCGCCGACACCGGCATCCAGTACGAAGGCCGCA
CGGGCGGCACGCTGCAACTGTTCCGCACGCAGCAGCAACTCGACGGCGCGGCGAAGGACATCGCGGTGCTGCGCGAAGCG
AACGTGCCGTTCGAACTGCTGTCGCCGGCCGAGCTGAAGAACGCGGAACCGGCGCTCGCGGCCGTCTCGCACAAGCTCAC
CGGCGGTCTGCGTCTGCCGGGCGACGAAACGGGCGACTGCCAGCTGTTCACGACGCGCCTCGCGGCGCTCGCCGAATCGC
TCGGCGTGAAGTTCCGCTACAACACGCCGATCGACGGGCTCGCGATCGCGGGCGGCAAGATCGCCGGCGTGCAGTGCGGC
AGCGAGACGGTGCGCGCCGACGCGTACGTGGTCGCGCTCGGCTCGTACTCGACGAATTTCGTCGCGAATCTGATGAAGAT
CCCGGTCTATCCGCTGAAGGGCTATTCGATCACTGCGCCGATCGTCGACGAAGCGGCCGCACCGGTGTCGACGGTGCTCG
ACGAAACCTACAAGATCGCGATCACGCGTTTCGACCAGCGCATCCGCGTCGGCGGGATGGCGGAAATCGTCGGCTTCGAC
AAGACGCTGCGCGCGGCACGCCGCGAGACGCTCGAAATGTGCGTGAACGATCTGTTCCCGGGCGGCGGCGACACGTCGAA
GGCCACGTTCTGGACGGGCCTGCGCCCGATGACGCCGGACGGCACGCCGATCGTCGGCCGCACGCCGGTGTCGAACCTGT
TCCTGAACACGGGCCACGGCACGCTCGGCTGGACGATGTCGTGCGGCTCCGGCCAGTTGCTCGCCGATCTGATCTCCGGC
AAGAAGCCGGCGATCCAGGCGGACGACCTGTCGGTGCATCGCTACCTGAAGGAAGTCGCGGGCCAGACGCGTCCGGCCTA
CGCATAA

Upstream 100 bases:

>100_bases
ATTCGACAATACCATAGCGCAAAAAACTAGATCAGTCAGAGGTTACACGGAGACGCAGGTGCGCCCGGCCTCGAGCTGAT
TTCTTCGATGTGGAGCAGCT

Downstream 100 bases:

>100_bases
GCAGCGACGGCCGCGCGAGCGGCCGGCCGTGCGACGAGAAAGCGCCCCTGCGGGCGCTTTTTTATTGGCCGGACGAGACG
CACGGCACGACGAACATTCG

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GTRFQLQWMWQMLRNCTPERYAVNKSRMVRLAEYSRDCLQALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLREA
NVPFELLSPAELKNAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDGLAIAGGKIAGVQCG
SETVRADAYVVALGSYSTNFVANLMKIPVYPLKGYSITAPIVDEAAAPVSTVLDETYKIAITRFDQRIRVGGMAEIVGFD
KTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISG
KKPAIQADDLSVHRYLKEVAGQTRPAYA

Sequences:

>Translated_428_residues
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GTRFQLQWMWQMLRNCTPERYAVNKSRMVRLAEYSRDCLQALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLREA
NVPFELLSPAELKNAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDGLAIAGGKIAGVQCG
SETVRADAYVVALGSYSTNFVANLMKIPVYPLKGYSITAPIVDEAAAPVSTVLDETYKIAITRFDQRIRVGGMAEIVGFD
KTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISG
KKPAIQADDLSVHRYLKEVAGQTRPAYA
>Mature_428_residues
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GTRFQLQWMWQMLRNCTPERYAVNKSRMVRLAEYSRDCLQALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLREA
NVPFELLSPAELKNAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDGLAIAGGKIAGVQCG
SETVRADAYVVALGSYSTNFVANLMKIPVYPLKGYSITAPIVDEAAAPVSTVLDETYKIAITRFDQRIRVGGMAEIVGFD
KTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISG
KKPAIQADDLSVHRYLKEVAGQTRPAYA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=415, Percent_Identity=73.2530120481928, Blast_Score=640, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46053; Mature: 46053

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PLKAVKWMFEKHAPLAIRLDGTRFQLQWMWQMLRNCTPERYAVNKSRMVRLAEYSRDCLQ
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHH
ALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLREANVPFELLSPAELKNAEPALA
HHHHCCCCEECCCCCCEEEEEECHHHHCCHHHHHHHHHCCCCCHHHCCCHHHCCCCHHHH
AVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDGLAIAGGKIAGVQCG
HHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCEEEEEECC
SETVRADAYVVALGSYSTNFVANLMKIPVYPLKGYSITAPIVDEAAAPVSTVLDETYKIA
CCCEECCEEEEEECCCCHHHHHHHHHCCCEECCCCEEECCHHHHHCCHHHHHHCCHHEEE
ITRFDQRIRVGGMAEIVGFDKTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPD
EEECCCHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC
GTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISGKKPAIQADDLSVHRYLKEVA
CCEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
GQTRPAYA
CCCCCCCC
>Mature Secondary Structure
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PLKAVKWMFEKHAPLAIRLDGTRFQLQWMWQMLRNCTPERYAVNKSRMVRLAEYSRDCLQ
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHH
ALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLREANVPFELLSPAELKNAEPALA
HHHHCCCCEECCCCCCEEEEEECHHHHCCHHHHHHHHHCCCCCHHHCCCHHHCCCCHHHH
AVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDGLAIAGGKIAGVQCG
HHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCEEEEEECC
SETVRADAYVVALGSYSTNFVANLMKIPVYPLKGYSITAPIVDEAAAPVSTVLDETYKIA
CCCEECCEEEEEECCCCHHHHHHHHHCCCEECCCCEEECCHHHHHCCHHHHHHCCHHEEE
ITRFDQRIRVGGMAEIVGFDKTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPD
EEECCCHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC
GTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISGKKPAIQADDLSVHRYLKEVA
CCEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
GQTRPAYA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA