| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161524901
Identifier: 161524901
GI number: 161524901
Start: 1908985
End: 1909977
Strand: Reverse
Name: 161524901
Synonym: Bmul_1728
Alternate gene names: NA
Gene position: 1909977-1908985 (Counterclockwise)
Preceding gene: 161524902
Following gene: 161524900
Centisome position: 55.39
GC content: 64.65
Gene sequence:
>993_bases ATGACAGCAACTCAGATCGGATCGATCGCGTTGGCGCTTGGCGCACTCGGCGTGCTGCTGCTCGGCATGATGGCACTGTT GCGTGCGAGCGCCGCCTCGCGCGCCGAACGTGCACTGGTCGATGCGCTCGACAGGCGCATGGCTACGCTTGAGGCGGCCA AGGCTCGCAGCGCGCCGGACGGCGATGCGGCCGCGAAATCGGAAGTGCCGGGTCGACAGAGCGTCAAGCGTCTGCTCGAG CGGCTGTCGGCGACGGGGATGCGCTGGCTCGATACCGGGCTTGGCAAACACATCGTCGCAGACGAGGATCGTCGTCTGCT CGAACAGTGCGGCTATGTCGACGCACGCTCGCGCGGGCTGTTCCTGAGCGCGCGGATGGCGTGCGGAATCGTGTTGCCGT TTTTGTTTGCGGTATTCGCTAGCGGACGCATGAAGGGCGGATACTGGGTGATCGGCATGTGCGTGGCGTTTGCGCTCGGC CTGATGCTGCCGAAGCTGTACGTGCAGCGCCGTGCAGCCGCACGCCGGCAGTGCGTCGACGACGAACTGCCGCTGTTCGT CGACATGCTGCGCTTGTTGCAGGGCGTCGGACTGTCGCTCGATCAAAGCCTGCAGGTCGTGACGAACGATTTTCGTGGAA TGATGCCGGTGCTGTCGTCGGAGGTGGGCGTCGCGCAGCGTCAGTTCGTGGCGGGGCGCACGCGCGAGCAGTCGATGCAA CGGTTGTCCGGTGGCTTCGACAACGAGGATTTGCGCGCCATCGTGCGGTTGATGGTCCAGGTCGACAAGCACGGCGGTGC GGTTCAGGAACCGCTCAAGCAGTTCGGCGACCGCCTTCGCGAAACGCGGCGGGCGATGCTTCGCGAACGAATCGGCCGAT TGACCGTGAAGATGACGGGCGTGATGGTGTTGACGCTGTTGCCCGCGTTGCTGATCGTGACGGCCGGGCCGGGGTTTTTG GCGGTGATGCATGCACTGTCGATGCGTCATTGA
Upstream 100 bases:
>100_bases TGGAACGATCCGAGCGGGCGAATGCTTCTCACGTTCGCGTTCCTCGCACAGTTGGCGGGCAGCGTGTGGTTGTATCGAAT GGCTCGACTCAGGTGATGCG
Downstream 100 bases:
>100_bases CGCGCGGAAGGAATGACGATGAAGCGGATCAACGGGATGAGGGCGTGCGCAGTGATGGCGGCGGCGGTGATGCTGCTCGG TGCGTGCGCGACCAAGGACA
Product: type II secretion system protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadC; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; TadC Protein; Flp Pilus Assembly Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System F Domain Protein; Bacterial Type II Secretion System Protein F Domain; Type II Secretion System Protein F Subunit; Tight Adherence TadC-Like Transmembrane Protein; Type II Secretion System; Type II Secretion System Protein F Domain; Bipartite Nuclear Localization Signal Containing Protein; Tight Adherence TadC Related Transmembrane Protein; Tight Adherence TadC-Related Transmembrane Protein; Type II Secretion System Protein Transmembrane; Secretion System Protein TadC; Transmembrane Type II Secretion Protein; Type II/IV Secretion System Membrane Protein; TadC Family Type II/IV Secretion System Protein
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTATQIGSIALALGALGVLLLGMMALLRASAASRAERALVDALDRRMATLEAAKARSAPDGDAAAKSEVPGRQSVKRLLE RLSATGMRWLDTGLGKHIVADEDRRLLEQCGYVDARSRGLFLSARMACGIVLPFLFAVFASGRMKGGYWVIGMCVAFALG LMLPKLYVQRRAAARRQCVDDELPLFVDMLRLLQGVGLSLDQSLQVVTNDFRGMMPVLSSEVGVAQRQFVAGRTREQSMQ RLSGGFDNEDLRAIVRLMVQVDKHGGAVQEPLKQFGDRLRETRRAMLRERIGRLTVKMTGVMVLTLLPALLIVTAGPGFL AVMHALSMRH
Sequences:
>Translated_330_residues MTATQIGSIALALGALGVLLLGMMALLRASAASRAERALVDALDRRMATLEAAKARSAPDGDAAAKSEVPGRQSVKRLLE RLSATGMRWLDTGLGKHIVADEDRRLLEQCGYVDARSRGLFLSARMACGIVLPFLFAVFASGRMKGGYWVIGMCVAFALG LMLPKLYVQRRAAARRQCVDDELPLFVDMLRLLQGVGLSLDQSLQVVTNDFRGMMPVLSSEVGVAQRQFVAGRTREQSMQ RLSGGFDNEDLRAIVRLMVQVDKHGGAVQEPLKQFGDRLRETRRAMLRERIGRLTVKMTGVMVLTLLPALLIVTAGPGFL AVMHALSMRH >Mature_329_residues TATQIGSIALALGALGVLLLGMMALLRASAASRAERALVDALDRRMATLEAAKARSAPDGDAAAKSEVPGRQSVKRLLER LSATGMRWLDTGLGKHIVADEDRRLLEQCGYVDARSRGLFLSARMACGIVLPFLFAVFASGRMKGGYWVIGMCVAFALGL MLPKLYVQRRAAARRQCVDDELPLFVDMLRLLQGVGLSLDQSLQVVTNDFRGMMPVLSSEVGVAQRQFVAGRTREQSMQR LSGGFDNEDLRAIVRLMVQVDKHGGAVQEPLKQFGDRLRETRRAMLRERIGRLTVKMTGVMVLTLLPALLIVTAGPGFLA VMHALSMRH
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36019; Mature: 35888
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATQIGSIALALGALGVLLLGMMALLRASAASRAERALVDALDRRMATLEAAKARSAPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GDAAAKSEVPGRQSVKRLLERLSATGMRWLDTGLGKHIVADEDRRLLEQCGYVDARSRGL CCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCH FLSARMACGIVLPFLFAVFASGRMKGGYWVIGMCVAFALGLMLPKLYVQRRAAARRQCVD HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DELPLFVDMLRLLQGVGLSLDQSLQVVTNDFRGMMPVLSSEVGVAQRQFVAGRTREQSMQ CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RLSGGFDNEDLRAIVRLMVQVDKHGGAVQEPLKQFGDRLRETRRAMLRERIGRLTVKMTG HHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMVLTLLPALLIVTAGPGFLAVMHALSMRH HHHHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure TATQIGSIALALGALGVLLLGMMALLRASAASRAERALVDALDRRMATLEAAKARSAPD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GDAAAKSEVPGRQSVKRLLERLSATGMRWLDTGLGKHIVADEDRRLLEQCGYVDARSRGL CCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCH FLSARMACGIVLPFLFAVFASGRMKGGYWVIGMCVAFALGLMLPKLYVQRRAAARRQCVD HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DELPLFVDMLRLLQGVGLSLDQSLQVVTNDFRGMMPVLSSEVGVAQRQFVAGRTREQSMQ CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RLSGGFDNEDLRAIVRLMVQVDKHGGAVQEPLKQFGDRLRETRRAMLRERIGRLTVKMTG HHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMVLTLLPALLIVTAGPGFLAVMHALSMRH HHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA