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The map label for this gene is 161524900

Identifier: 161524900

GI number: 161524900

Start: 1908124

End: 1908966

Strand: Reverse

Name: 161524900

Synonym: Bmul_1727

Alternate gene names: NA

Gene position: 1908966-1908124 (Counterclockwise)

Preceding gene: 161524901

Following gene: 161524899

Centisome position: 55.36

GC content: 64.29

Gene sequence:

>843_bases
ATGAAGCGGATCAACGGGATGAGGGCGTGCGCAGTGATGGCGGCGGCGGTGATGCTGCTCGGTGCGTGCGCGACCAAGGA
CAGCGGATATGGCGTCAGCGCGCAGGCCGAGCGTGCGGCGTTGATTCAGGCGGCCGACCAGAAGCAGTCGGTGCCCGATA
CGCCGGCGATGTACCTGAGCCTGATTCAGCGGATGCAGGCACAGGGCCTCTATTACGCGTCGCTCGCGCACATCGATGCT
TACGACAAGGCTTATGGCGTGTCGCCCGACACGATTCTGCTACGCGCGGACGCACTGCGGATGACTGATCAGCCGGCTGC
CAGCGCGGCATCGTACACGCAATTGCTGAAGACGCCGCTTGCCGCGCGCGGTTATCGAGGGCTTGGCCTCATTGCCGGCG
CAGCCGGCGATTTCGATCATGCGGTACAGGCATTGACGCAGGCGGCGGAACTCACGCCGACCGATGCATCGCTGTTGTCC
GATCTCGCCTACGCGAAGCTGCGCAACGGCGATGTCGTCGGCGCGCGGGTGCCGCTGATGAAGGCGGCGGAACTGGATCA
GCACAATCCGAAGATCGTCAGTAATCTTGCGCTCTATCTGCTGGCAGCCGGCCGGTCGCAGGACGCACAGCGACTGATGA
ACCAGCAGCGTCTGCCGGCGGAGATCCGGAAGGACATCAGCAACGACGCCACGAAGATCGCAACTGCGGTGCGCGCACAG
CAACGTGCGGTTGCGACGCCGCCGGTGGTGTCGCGGCGCGGCGTGAATGCCCCGATCACGCCGATGGCGAACAATTTTGG
CTACGACCAGACCGTGCCGCTGCTGCAACGGTTTGCACAATGA

Upstream 100 bases:

>100_bases
GACGCTGTTGCCCGCGTTGCTGATCGTGACGGCCGGGCCGGGGTTTTTGGCGGTGATGCATGCACTGTCGATGCGTCATT
GACGCGCGGAAGGAATGACG

Downstream 100 bases:

>100_bases
ACAGACAGGCGGGGAGCGACATGAACCACAGACATCATCGAAACATGCGTGCGGGTCGATTCGCGATGCTCGGCGCGGTC
ATATGCATGGCAATGAGTAC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKRINGMRACAVMAAAVMLLGACATKDSGYGVSAQAERAALIQAADQKQSVPDTPAMYLSLIQRMQAQGLYYASLAHIDA
YDKAYGVSPDTILLRADALRMTDQPAASAASYTQLLKTPLAARGYRGLGLIAGAAGDFDHAVQALTQAAELTPTDASLLS
DLAYAKLRNGDVVGARVPLMKAAELDQHNPKIVSNLALYLLAAGRSQDAQRLMNQQRLPAEIRKDISNDATKIATAVRAQ
QRAVATPPVVSRRGVNAPITPMANNFGYDQTVPLLQRFAQ

Sequences:

>Translated_280_residues
MKRINGMRACAVMAAAVMLLGACATKDSGYGVSAQAERAALIQAADQKQSVPDTPAMYLSLIQRMQAQGLYYASLAHIDA
YDKAYGVSPDTILLRADALRMTDQPAASAASYTQLLKTPLAARGYRGLGLIAGAAGDFDHAVQALTQAAELTPTDASLLS
DLAYAKLRNGDVVGARVPLMKAAELDQHNPKIVSNLALYLLAAGRSQDAQRLMNQQRLPAEIRKDISNDATKIATAVRAQ
QRAVATPPVVSRRGVNAPITPMANNFGYDQTVPLLQRFAQ
>Mature_280_residues
MKRINGMRACAVMAAAVMLLGACATKDSGYGVSAQAERAALIQAADQKQSVPDTPAMYLSLIQRMQAQGLYYASLAHIDA
YDKAYGVSPDTILLRADALRMTDQPAASAASYTQLLKTPLAARGYRGLGLIAGAAGDFDHAVQALTQAAELTPTDASLLS
DLAYAKLRNGDVVGARVPLMKAAELDQHNPKIVSNLALYLLAAGRSQDAQRLMNQQRLPAEIRKDISNDATKIATAVRAQ
QRAVATPPVVSRRGVNAPITPMANNFGYDQTVPLLQRFAQ

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- InterPro:   IPR016931 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29824; Mature: 29824

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRINGMRACAVMAAAVMLLGACATKDSGYGVSAQAERAALIQAADQKQSVPDTPAMYLS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
LIQRMQAQGLYYASLAHIDAYDKAYGVSPDTILLRADALRMTDQPAASAASYTQLLKTPL
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHH
AARGYRGLGLIAGAAGDFDHAVQALTQAAELTPTDASLLSDLAYAKLRNGDVVGARVPLM
HHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCHH
KAAELDQHNPKIVSNLALYLLAAGRSQDAQRLMNQQRLPAEIRKDISNDATKIATAVRAQ
HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHH
QRAVATPPVVSRRGVNAPITPMANNFGYDQTVPLLQRFAQ
HHHCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKRINGMRACAVMAAAVMLLGACATKDSGYGVSAQAERAALIQAADQKQSVPDTPAMYLS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
LIQRMQAQGLYYASLAHIDAYDKAYGVSPDTILLRADALRMTDQPAASAASYTQLLKTPL
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHH
AARGYRGLGLIAGAAGDFDHAVQALTQAAELTPTDASLLSDLAYAKLRNGDVVGARVPLM
HHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCHH
KAAELDQHNPKIVSNLALYLLAAGRSQDAQRLMNQQRLPAEIRKDISNDATKIATAVRAQ
HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHH
QRAVATPPVVSRRGVNAPITPMANNFGYDQTVPLLQRFAQ
HHHCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]