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The map label for this gene is ywhC [H]

Identifier: 161524351

GI number: 161524351

Start: 1293312

End: 1293974

Strand: Direct

Name: ywhC [H]

Synonym: Bmul_1176

Alternate gene names: 161524351

Gene position: 1293312-1293974 (Clockwise)

Preceding gene: 161524350

Following gene: 161524352

Centisome position: 37.5

GC content: 66.06

Gene sequence:

>663_bases
ATGGATGCTTCCCTGATACAGACCATCGCCGTCTACGCGCTGCCCGTGATCTTCGCGATCACGCTGCACGAGGCGGCGCA
CGGCTATGCCGCCCGCCTGCTCGGCGACAACACCGCCTACATGATGGGGCGCGTGTCGTTCAATCCGATGCGGCACATCG
ATCCGCTCGGCACGATCGCCATTCCGCTCGCGATGTATTTCCTGACCGGCGGCATGTTCCTGTTCGGCTATGCGAAGCCG
GTGCCCGTCGCGTTCCGCAACCTGCGCGATCCGCGCTGGGGCAGCCTGTGGGTGTCGCTCGCGGGCCCGGCGTGCAACTT
CGTGCAGGCGCTGGCGTGGGGCGTGATCGGCATCCTGCTGCGCGCGGCGGGCGTCGACGAGCCGTTCTTCACGCGGATGG
CGTTCGCCGGCGTCAGCGCGAACCTCGTGCTCGGCGTGCTGAACCTGTTTCCGCTTCCGCCGCTCGACGGCGGCCGCATT
CTCGCGGCGCTGTTGCCGCCGAAACAATCGATCGCGCTGTCGCGTATCGAGCCGTACGGTTTCATCATCGTCCTCGTGCT
GGTGGCGACGGGCGTGCTGACGAATTTCTGGCTGCGTCCGCTCGTCAACGTCGGCGCGGACGTCCTGAACGCCATCCTGA
CTCCTTTGGCCTTGCTTTTCTAA

Upstream 100 bases:

>100_bases
TCGTGCGCGCGGGGCGCGGCGCACTCGAGCCGTTCGGGCTCACCGCGCCGTAAGCGCGCGTTTCATTTTTGCGCGGGGGC
GCTTGTTACAATAACGCGAT

Downstream 100 bases:

>100_bases
CGACAATCATGTTCCCAGATCGTATCTTCTCCGGCATGCGACCCACCGGGTCGCTGCACCTCGGCCATTACCATGGCGTG
CTGAAAAACTGGGTGAAACT

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MDASLIQTIAVYALPVIFAITLHEAAHGYAARLLGDNTAYMMGRVSFNPMRHIDPLGTIAIPLAMYFLTGGMFLFGYAKP
VPVAFRNLRDPRWGSLWVSLAGPACNFVQALAWGVIGILLRAAGVDEPFFTRMAFAGVSANLVLGVLNLFPLPPLDGGRI
LAALLPPKQSIALSRIEPYGFIIVLVLVATGVLTNFWLRPLVNVGADVLNAILTPLALLF

Sequences:

>Translated_220_residues
MDASLIQTIAVYALPVIFAITLHEAAHGYAARLLGDNTAYMMGRVSFNPMRHIDPLGTIAIPLAMYFLTGGMFLFGYAKP
VPVAFRNLRDPRWGSLWVSLAGPACNFVQALAWGVIGILLRAAGVDEPFFTRMAFAGVSANLVLGVLNLFPLPPLDGGRI
LAALLPPKQSIALSRIEPYGFIIVLVLVATGVLTNFWLRPLVNVGADVLNAILTPLALLF
>Mature_220_residues
MDASLIQTIAVYALPVIFAITLHEAAHGYAARLLGDNTAYMMGRVSFNPMRHIDPLGTIAIPLAMYFLTGGMFLFGYAKP
VPVAFRNLRDPRWGSLWVSLAGPACNFVQALAWGVIGILLRAAGVDEPFFTRMAFAGVSANLVLGVLNLFPLPPLDGGRI
LAALLPPKQSIALSRIEPYGFIIVLVLVATGVLTNFWLRPLVNVGADVLNAILTPLALLF

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 23672; Mature: 23672

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASLIQTIAVYALPVIFAITLHEAAHGYAARLLGDNTAYMMGRVSFNPMRHIDPLGTIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHHHHH
IPLAMYFLTGGMFLFGYAKPVPVAFRNLRDPRWGSLWVSLAGPACNFVQALAWGVIGILL
HHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
RAAGVDEPFFTRMAFAGVSANLVLGVLNLFPLPPLDGGRILAALLPPKQSIALSRIEPYG
HHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHCCHHH
FIIVLVLVATGVLTNFWLRPLVNVGADVLNAILTPLALLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDASLIQTIAVYALPVIFAITLHEAAHGYAARLLGDNTAYMMGRVSFNPMRHIDPLGTIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHHHHH
IPLAMYFLTGGMFLFGYAKPVPVAFRNLRDPRWGSLWVSLAGPACNFVQALAWGVIGILL
HHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
RAAGVDEPFFTRMAFAGVSANLVLGVLNLFPLPPLDGGRILAALLPPKQSIALSRIEPYG
HHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHCCHHH
FIIVLVLVATGVLTNFWLRPLVNVGADVLNAILTPLALLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]