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The map label for this gene is yciO [H]

Identifier: 161524350

GI number: 161524350

Start: 1292632

End: 1293264

Strand: Direct

Name: yciO [H]

Synonym: Bmul_1175

Alternate gene names: 161524350

Gene position: 1292632-1293264 (Clockwise)

Preceding gene: 161524349

Following gene: 161524351

Centisome position: 37.48

GC content: 66.82

Gene sequence:

>633_bases
ATGTCCCAGTTCTTCAGGATTCATCCGGATAATCCGCAGCCGCGCCTGATCAAGCAGGCGGTGGAGATCGTCAACAAGGG
CGGCGTGGTCGCGATGCCGACCGATTCAAGCTATGCGCTCGCGTGCCACCTCGACGACAAGGACGCGGTGGAGCGCGTGC
GCCGCATTCGCGGCCTCGACGAAAAGCAGCATTTGTCGCTGCTCGTGCGCGATCTGTCGGAGCTCGCGAACTTCGCGATG
GTCGACAACCGCCAGTACCGGCAGATCAAGTCGGTCACGCCGGGGCCGTACGTGTTCATCCTGCAGGCGACGAAGGAAGT
GCCGCGCCGGCTGTCGCATCCGTCGCGCAAGACGATCGGGCTGCGCGTGCCGGATCACGCGATCACGCTCGCGCTGCTGG
AATCGCTCGGCCAGCCGCTGCTCGGCACGACGCTGATCCTGCCGCCGGACGACGAACCGCTCAACGATCCCGAGGACATT
CGCGCGCGGCTCGAAAAGCAGGTCGATCTCGTGATCGACGGCGGCGCGTGTCCGCGCGAACCGTCGACGGTGATCGACCT
GACCGGCGACGTGCCGCAACTCGTGCGCGCGGGGCGCGGCGCACTCGAGCCGTTCGGGCTCACCGCGCCGTAA

Upstream 100 bases:

>100_bases
ACCGGTCTGGGCACGCTGGCTCTGATGCGCCGCCGCCGCGCGCGGCCGTGCGTGCAGCGGCCCGTGCCGGCGTCCGAACT
CCTTCTCTTTACGTGCTCCC

Downstream 100 bases:

>100_bases
GCGCGCGTTTCATTTTTGCGCGGGGGCGCTTGTTACAATAACGCGATATGGATGCTTCCCTGATACAGACCATCGCCGTC
TACGCGCTGCCCGTGATCTT

Product: Sua5/YciO/YrdC/YwlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSQFFRIHPDNPQPRLIKQAVEIVNKGGVVAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQHLSLLVRDLSELANFAM
VDNRQYRQIKSVTPGPYVFILQATKEVPRRLSHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDI
RARLEKQVDLVIDGGACPREPSTVIDLTGDVPQLVRAGRGALEPFGLTAP

Sequences:

>Translated_210_residues
MSQFFRIHPDNPQPRLIKQAVEIVNKGGVVAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQHLSLLVRDLSELANFAM
VDNRQYRQIKSVTPGPYVFILQATKEVPRRLSHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDI
RARLEKQVDLVIDGGACPREPSTVIDLTGDVPQLVRAGRGALEPFGLTAP
>Mature_209_residues
SQFFRIHPDNPQPRLIKQAVEIVNKGGVVAMPTDSSYALACHLDDKDAVERVRRIRGLDEKQHLSLLVRDLSELANFAMV
DNRQYRQIKSVTPGPYVFILQATKEVPRRLSHPSRKTIGLRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDIR
ARLEKQVDLVIDGGACPREPSTVIDLTGDVPQLVRAGRGALEPFGLTAP

Specific function: Unknown

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI87081864, Length=205, Percent_Identity=58.5365853658537, Blast_Score=247, Evalue=3e-67,
Organism=Escherichia coli, GI2367210, Length=186, Percent_Identity=26.8817204301075, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78707274, Length=184, Percent_Identity=29.3478260869565, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR004388
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 23228; Mature: 23097

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFFRIHPDNPQPRLIKQAVEIVNKGGVVAMPTDSSYALACHLDDKDAVERVRRIRGLD
CCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCC
EKQHLSLLVRDLSELANFAMVDNRQYRQIKSVTPGPYVFILQATKEVPRRLSHPSRKTIG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCEEE
LRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDIRARLEKQVDLVIDGGACPRE
EECCHHHHHHHHHHHHCCCHHCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCC
PSTVIDLTGDVPQLVRAGRGALEPFGLTAP
CCEEEEECCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQFFRIHPDNPQPRLIKQAVEIVNKGGVVAMPTDSSYALACHLDDKDAVERVRRIRGLD
CCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCC
EKQHLSLLVRDLSELANFAMVDNRQYRQIKSVTPGPYVFILQATKEVPRRLSHPSRKTIG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCEEE
LRVPDHAITLALLESLGQPLLGTTLILPPDDEPLNDPEDIRARLEKQVDLVIDGGACPRE
EECCHHHHHHHHHHHHCCCHHCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCC
PSTVIDLTGDVPQLVRAGRGALEPFGLTAP
CCEEEEECCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]