Definition Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence.
Accession NC_010084
Length 3,448,466

Click here to switch to the map view.

The map label for this gene is 161524103

Identifier: 161524103

GI number: 161524103

Start: 1015559

End: 1016017

Strand: Reverse

Name: 161524103

Synonym: Bmul_0927

Alternate gene names: NA

Gene position: 1016017-1015559 (Counterclockwise)

Preceding gene: 161524104

Following gene: 161524102

Centisome position: 29.46

GC content: 64.71

Gene sequence:

>459_bases
ATGGCTAACGTCTACGACAAACTGAAATCGCTGGGCATCGAACTGCCGAGCGCCGGCGCACCGGCTGCCGCCTACGTGAT
GAGCGCGCAAAGCGGCAACACGGTCTACCTCTCGGGCCACATCGCGAAGAAGGACGGCAAGGTGTGGGCCGGCAAGCTCG
GCGCCGACCTGACGACCGAAGACGGCAAGGCGGCCGCGCGCGCGATCGCGATCGACCTGCTCGCGACGCTGCACGCGCAC
ACCGGCGACCTGAACAAGGTCACGCGCATCGTGAAGCTGATGAGCCTCGTGAACTCGACGCTCGACTTCACCGAGCAGCA
CATCGTGACGAACGGCGCATCGGAACTGATCGCCGAAGTATTCGGCGATGCGGGCAAGCATGCACGCTCGGCGTTCGGCG
TCGCGCAGATTCCGCTCGGCGCGTGCGTCGAGATCGAACTGATCGTCGAAGTCGCGTAA

Upstream 100 bases:

>100_bases
GAGAAGATCGAGGAAGGCGTCGCGCGGCTCGGCAAGCTGATCCGCGAGCGCCTCTGATCCGCCCTTTTTCCTGTCAAGAC
TCACTACGAGGAACGAACGC

Downstream 100 bases:

>100_bases
TACGCCGATGTCCGGCCGCCTCGTTCGCTTCGCGCAGGTCGACGTGTTCACGTCGGTGCCGTTCAAGGGCAATCCGCTCG
CGGTCGTATTCGACGCCGAT

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Transcriptional Regulator; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MANVYDKLKSLGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGADLTTEDGKAAARAIAIDLLATLHAH
TGDLNKVTRIVKLMSLVNSTLDFTEQHIVTNGASELIAEVFGDAGKHARSAFGVAQIPLGACVEIELIVEVA

Sequences:

>Translated_152_residues
MANVYDKLKSLGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGADLTTEDGKAAARAIAIDLLATLHAH
TGDLNKVTRIVKLMSLVNSTLDFTEQHIVTNGASELIAEVFGDAGKHARSAFGVAQIPLGACVEIELIVEVA
>Mature_151_residues
ANVYDKLKSLGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGADLTTEDGKAAARAIAIDLLATLHAHT
GDLNKVTRIVKLMSLVNSTLDFTEQHIVTNGASELIAEVFGDAGKHARSAFGVAQIPLGACVEIELIVEVA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15768; Mature: 15637

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVYDKLKSLGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGADLTTE
CCCHHHHHHHCCCCCCCCCCCHHHEEEECCCCCEEEEEEEEECCCCCEEECCCCCCCCCC
DGKAAARAIAIDLLATLHAHTGDLNKVTRIVKLMSLVNSTLDFTEQHIVTNGASELIAEV
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FGDAGKHARSAFGVAQIPLGACVEIELIVEVA
HCCCCHHHHHHCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
ANVYDKLKSLGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGADLTTE
CCHHHHHHHCCCCCCCCCCCHHHEEEECCCCCEEEEEEEEECCCCCEEECCCCCCCCCC
DGKAAARAIAIDLLATLHAHTGDLNKVTRIVKLMSLVNSTLDFTEQHIVTNGASELIAEV
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FGDAGKHARSAFGVAQIPLGACVEIELIVEVA
HCCCCHHHHHHCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA