| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is adiA [H]
Identifier: 161524041
GI number: 161524041
Start: 941586
End: 943865
Strand: Direct
Name: adiA [H]
Synonym: Bmul_0862
Alternate gene names: 161524041
Gene position: 941586-943865 (Clockwise)
Preceding gene: 161524040
Following gene: 161524042
Centisome position: 27.3
GC content: 64.91
Gene sequence:
>2280_bases ATGAAGTTTCGTTTCCCCGTCGTGATCATCGACGAAGATTTCCGCTCCGAGAACATCTCGGGCTCCGGCATCCGGGCGCT GGCCGAAGCGATCGAGAAGGAGGGCGTGGAAGTCCTCGGCCTCACGAGCTACGGCGATCTGACGTCGTTCGCGCAGCAGT CGAGCCGCGCCTCGTGCTTCATCCTGTCGATCGACGACGACGAACTCATGCTCGGCGAAATCGGCCCGGACGGCGAGCTG CCCGAGCTCGCGACCGCGATCATCGAGCTGCGCGCGTTCGTCACCGAAGTGCGCCGCCGCAATGCGGACATCCCGATCTT CCTGTACGGCGAGACGCGCACCTCGCGCCATCTGCCGAACGACATCCTGCGCGAGCTGCACGGCTTCATCCACATGTTCG AGGACACGCCGGAGTTCGTCGCGCGCCACATCATCCGCGAGGCGAAGGTCTATCTCGACTCGCTCGCGCCGCCGTTCTTC AAGGAACTCGTCAAGTACGCGGACGAAGGCTCGTATTCGTGGCACTGCCCCGGCCACTCGGGCGGCGTCGCGTTCCTGAA GAACCCGCTCGGCCAGATGTTCCACCAGTTCTTCGGCGAGAACATGCTGCGCGCGGACGTCTGCAACGCGGTCGACGAAC TCGGCCAGCTGCTCGACCATACGGGCCCCGTCGCGGCGTCGGAGCGCAACGCGGCGCGCATCTTCAGCGCCGATCATCTG TTCTTCGTGACCAACGGCACGTCGACGTCGAACAAGATCGTCTGGCACGCGACCGTCGCGCCGGGCGACATCGTGCTCGT CGACCGCAACTGCCACAAGTCGATCCTGCACGCGATCACGATGACGGGCGCGATCCCCGTGTTCCTCACGCCGACGCGCA ACCACTTCGGCATCATCGGCCCGATTCCGCGCGACGAGTTCAAGCCCGAGAACATCCGCAAGAAGATCGAGGCGAACCCG TTCGCGCGCGAAGCGCTGCGTCAGAACCCCGACCTCAAGCCGCGCATCCTGACGATCACGCAGAGCACCTACGACGGCGT CGTCTACAACGTCGAGATGATCAAGGACCTGCTCGGCGATCTGCTCGACACGCTGCACTTCGACGAAGCATGGCTGCCGC ACGCGGCGTTCCATCCGTTCTATCGCGACATGCACGCGATCGGCGACGGCCGTCCGCGCACGGGCGCGCTCGTGTTCGCG ACGCACTCGACGCACAAGCTGCTCGCCGGCATCTCGCAGGCGTCGCAGATCGTCGTGCAGGATTCGGAGAACCGCACGTT CGACAAGCATCGCTTCAACGAGGCGTATCTGATGCATACGTCGACGAGTCCGCAGTACGCGATCATCGCGTCGTGCGACG TCGCGGCCGCGATGATGGAGCCGCCGGGCGGCACCGCGCTCGTCGAGGAATCGATCGCCGAGGCGATCGACTTCCGCCGC GCGATGCGCAAGGTCGACGCCGAATACGGCGACGACTGGTTCTTCAGCGTGTGGGGCCCGGAGGATCTGTCCGAAGAAGG GATCGGCTCGCGCGAAGCCTGGATGCTGAAGCCGAACGACCGCTGGCACGGCTTCGGTCCGCTCGCCGAAGGCTTCAACA TGCTCGACCCGATCAAGGCGACGATCATCACGCCGGGGCTCGACGTCGACGGCGAGTTCGGCGAGACCGGCATTCCGGCC GCGATCGTCACGAAGTACCTGGCCGAGCACGGCATCATCGTCGAGAAGACGGGCCTGTACTCGTTCTTCATCATGTTCAC GATCGGCATCACGAAGGGCCGCTGGAACTCGATGGTGACCGAGCTGCAGCAGTTCAAGGACGATTACGACAACAACCAGC CGCTCTGGCGCGTGCTGCCCGAATTCGTCGCGCAGCATCCGCGCTACGAGCGCGTCGGGCTGCGCGACCTCTGCACGCAG ATCCACGACGTCTACCGCGCGAACGACATCGCGCGCCTGACGACCGAGATGTATCTGTCGGACATGGAGCCCGCGATGAA GCCGTCGGACGCGTTCGCGAAGCTCGCGCACCGCAAGATCGACCGCGTGCCGCTCGACGAGCTCGAAGGCCGCGTGACGA GCATCCTGCTGACGCCGTACCCGCCGGGCATTCCGCTGCTGATCCCGGGCGAGCGCTTCAACAAGACGATCGTGAACTAC CTGCGGTTCGCGCGCGACTTCAACGAGCGCTTCCCGGGCTTCCATACCGACATCCACGGTCTCGTCGCGGAAGAGGTGAA CGGCCGCGTCGAGTACTTCGTCGACTGCGTGCGCGACTGA
Upstream 100 bases:
>100_bases CACGCTGCCGAAAACCTGATCTGCTTGCATAACGTCTCACCAGTTTCCGGGTGACCGCTGCGCGTGACGCGCCGCGGTCG TTCTTTTTGGAGAATCGCCC
Downstream 100 bases:
>100_bases TGGCGGCGCAGGGACGAATCCAGGCGGTGCGCGCGGCGGCCGCCGCGCTCGCCGTCTGGGCGGTCTGCTCGGCGGCGCCG GGCCTCGCGCACGCCGAAGT
Product: lysine decarboxylase
Products: NA
Alternate protein names: ADC [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGVEVLGLTSYGDLTSFAQQSSRASCFILSIDDDELMLGEIGPDGEL PELATAIIELRAFVTEVRRRNADIPIFLYGETRTSRHLPNDILRELHGFIHMFEDTPEFVARHIIREAKVYLDSLAPPFF KELVKYADEGSYSWHCPGHSGGVAFLKNPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSADHL FFVTNGTSTSNKIVWHATVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNHFGIIGPIPRDEFKPENIRKKIEANP FAREALRQNPDLKPRILTITQSTYDGVVYNVEMIKDLLGDLLDTLHFDEAWLPHAAFHPFYRDMHAIGDGRPRTGALVFA THSTHKLLAGISQASQIVVQDSENRTFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEAIDFRR AMRKVDAEYGDDWFFSVWGPEDLSEEGIGSREAWMLKPNDRWHGFGPLAEGFNMLDPIKATIITPGLDVDGEFGETGIPA AIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMVTELQQFKDDYDNNQPLWRVLPEFVAQHPRYERVGLRDLCTQ IHDVYRANDIARLTTEMYLSDMEPAMKPSDAFAKLAHRKIDRVPLDELEGRVTSILLTPYPPGIPLLIPGERFNKTIVNY LRFARDFNERFPGFHTDIHGLVAEEVNGRVEYFVDCVRD
Sequences:
>Translated_759_residues MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGVEVLGLTSYGDLTSFAQQSSRASCFILSIDDDELMLGEIGPDGEL PELATAIIELRAFVTEVRRRNADIPIFLYGETRTSRHLPNDILRELHGFIHMFEDTPEFVARHIIREAKVYLDSLAPPFF KELVKYADEGSYSWHCPGHSGGVAFLKNPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSADHL FFVTNGTSTSNKIVWHATVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNHFGIIGPIPRDEFKPENIRKKIEANP FAREALRQNPDLKPRILTITQSTYDGVVYNVEMIKDLLGDLLDTLHFDEAWLPHAAFHPFYRDMHAIGDGRPRTGALVFA THSTHKLLAGISQASQIVVQDSENRTFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEAIDFRR AMRKVDAEYGDDWFFSVWGPEDLSEEGIGSREAWMLKPNDRWHGFGPLAEGFNMLDPIKATIITPGLDVDGEFGETGIPA AIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMVTELQQFKDDYDNNQPLWRVLPEFVAQHPRYERVGLRDLCTQ IHDVYRANDIARLTTEMYLSDMEPAMKPSDAFAKLAHRKIDRVPLDELEGRVTSILLTPYPPGIPLLIPGERFNKTIVNY LRFARDFNERFPGFHTDIHGLVAEEVNGRVEYFVDCVRD >Mature_759_residues MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGVEVLGLTSYGDLTSFAQQSSRASCFILSIDDDELMLGEIGPDGEL PELATAIIELRAFVTEVRRRNADIPIFLYGETRTSRHLPNDILRELHGFIHMFEDTPEFVARHIIREAKVYLDSLAPPFF KELVKYADEGSYSWHCPGHSGGVAFLKNPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSADHL FFVTNGTSTSNKIVWHATVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNHFGIIGPIPRDEFKPENIRKKIEANP FAREALRQNPDLKPRILTITQSTYDGVVYNVEMIKDLLGDLLDTLHFDEAWLPHAAFHPFYRDMHAIGDGRPRTGALVFA THSTHKLLAGISQASQIVVQDSENRTFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEAIDFRR AMRKVDAEYGDDWFFSVWGPEDLSEEGIGSREAWMLKPNDRWHGFGPLAEGFNMLDPIKATIITPGLDVDGEFGETGIPA AIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMVTELQQFKDDYDNNQPLWRVLPEFVAQHPRYERVGLRDLCTQ IHDVYRANDIARLTTEMYLSDMEPAMKPSDAFAKLAHRKIDRVPLDELEGRVTSILLTPYPPGIPLLIPGERFNKTIVNY LRFARDFNERFPGFHTDIHGLVAEEVNGRVEYFVDCVRD
Specific function: ADC can be found in two forms:biodegradative and biosynthetic. The biodegradative form may play a role in regulating pH by consuming proteins [H]
COG id: COG1982
COG function: function code E; Arginine/lysine/ornithine decarboxylases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-I family [H]
Homologues:
Organism=Escherichia coli, GI221142684, Length=776, Percent_Identity=37.3711340206186, Blast_Score=541, Evalue=1e-155, Organism=Escherichia coli, GI1790573, Length=740, Percent_Identity=36.7567567567568, Blast_Score=496, Evalue=1e-141, Organism=Escherichia coli, GI1786384, Length=726, Percent_Identity=36.9146005509642, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI1786909, Length=672, Percent_Identity=33.0357142857143, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI87082193, Length=671, Percent_Identity=34.1281669150522, Blast_Score=368, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005308 - InterPro: IPR011193 - InterPro: IPR000310 - InterPro: IPR008286 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01276 OKR_DC_1; PF03711 OKR_DC_1_C; PF03709 OKR_DC_1_N [H]
EC number: =4.1.1.19 [H]
Molecular weight: Translated: 85502; Mature: 85502
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00703 OKR_DC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGVEVLGLTSYGDLTSFAQQSSRASCF CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEE ILSIDDDELMLGEIGPDGELPELATAIIELRAFVTEVRRRNADIPIFLYGETRTSRHLPN EEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCH DILRELHGFIHMFEDTPEFVARHIIREAKVYLDSLAPPFFKELVKYADEGSYSWHCPGHS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCC GGVAFLKNPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSADHL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEE FFVTNGTSTSNKIVWHATVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNHFGIIG EEEECCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEC PIPRDEFKPENIRKKIEANPFAREALRQNPDLKPRILTITQSTYDGVVYNVEMIKDLLGD CCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHH LLDTLHFDEAWLPHAAFHPFYRDMHAIGDGRPRTGALVFATHSTHKLLAGISQASQIVVQ HHHHHCCCCCCCCHHHHCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCEEEEE DSENRTFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEAIDFRR CCCCCCCHHHCCCCEEEEEECCCCCEEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHH AMRKVDAEYGDDWFFSVWGPEDLSEEGIGSREAWMLKPNDRWHGFGPLAEGFNMLDPIKA HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCC TIITPGLDVDGEFGETGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMVT EEECCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCHHHHHHH ELQQFKDDYDNNQPLWRVLPEFVAQHPRYERVGLRDLCTQIHDVYRANDIARLTTEMYLS HHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DMEPAMKPSDAFAKLAHRKIDRVPLDELEGRVTSILLTPYPPGIPLLIPGERFNKTIVNY HCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCCCCCEEECCHHHHHHHHHH LRFARDFNERFPGFHTDIHGLVAEEVNGRVEYFVDCVRD HHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGVEVLGLTSYGDLTSFAQQSSRASCF CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEE ILSIDDDELMLGEIGPDGELPELATAIIELRAFVTEVRRRNADIPIFLYGETRTSRHLPN EEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCH DILRELHGFIHMFEDTPEFVARHIIREAKVYLDSLAPPFFKELVKYADEGSYSWHCPGHS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCC GGVAFLKNPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSADHL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEE FFVTNGTSTSNKIVWHATVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNHFGIIG EEEECCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEC PIPRDEFKPENIRKKIEANPFAREALRQNPDLKPRILTITQSTYDGVVYNVEMIKDLLGD CCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHH LLDTLHFDEAWLPHAAFHPFYRDMHAIGDGRPRTGALVFATHSTHKLLAGISQASQIVVQ HHHHHCCCCCCCCHHHHCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCEEEEE DSENRTFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEAIDFRR CCCCCCCHHHCCCCEEEEEECCCCCEEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHH AMRKVDAEYGDDWFFSVWGPEDLSEEGIGSREAWMLKPNDRWHGFGPLAEGFNMLDPIKA HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCC TIITPGLDVDGEFGETGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMVT EEECCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCHHHHHHH ELQQFKDDYDNNQPLWRVLPEFVAQHPRYERVGLRDLCTQIHDVYRANDIARLTTEMYLS HHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DMEPAMKPSDAFAKLAHRKIDRVPLDELEGRVTSILLTPYPPGIPLLIPGERFNKTIVNY HCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCCCCCEEECCHHHHHHHHHH LRFARDFNERFPGFHTDIHGLVAEEVNGRVEYFVDCVRD HHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8383109; 7610040; 9278503; 2830169; 4204273 [H]