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The map label for this gene is cyt [H]

Identifier: 161524010

GI number: 161524010

Start: 907951

End: 908388

Strand: Reverse

Name: cyt [H]

Synonym: Bmul_0831

Alternate gene names: 161524010

Gene position: 908388-907951 (Counterclockwise)

Preceding gene: 161524011

Following gene: 161524006

Centisome position: 26.34

GC content: 69.63

Gene sequence:

>438_bases
GTGCAGCGGTCCGTCCATCCCCGCCCCACCGGCAGCGCGCCGAACCGGCGTCTTCTTTGCTCTTATAATGCGCGGACCGT
GAAGCCGGCCGTGCCGCCGGCGGAGAACCGCATGAAACCAACGATATTGCGCGCGCTGCTCGCGACGCTGCTGGCCGGCG
GCGCGGCGGCCGCGTCGGCGCAGCAGGCCGACGGACTGACGCTCGCGCAACGCAAGAACTGCATGGCCTGCCATGCGGTC
GGCAAGCCGCTGATGGGCCCGTCGTTCCACGACATCGCGCGCCGCTATGCGCCGCGCGGCGATGCGGCCGACTATCTCGC
GCAGTCGATCGTGAAGGGCAGCGTCGGCGTGTGGGGGAACGTGCCGATGCCCGCCAATACGCAGCTGACGACCGCCGAAG
CGCATACGCTCGCGCAATGGGTGATGTCGCTGCACTGA

Upstream 100 bases:

>100_bases
CGCGCTCGCACGGCCGGCGAATCGGGGTGCGGTCACGGGGTGACGTGCGGCCGCGTCATGCGGGCTGTTTTCGGCGGTGC
GGCCGTGCGGCCGCTCGGCG

Downstream 100 bases:

>100_bases
TTCGAATCGGATGAAAACCGGCTGCGGCGCGCTCGACATGCGGCCGCATCGCCGTTGCGCCGGCGTGGCCGGCTCGCCGC
TCAGTCGGAACGCGTGCCGC

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQRSVHPRPTGSAPNRRLLCSYNARTVKPAVPPAENRMKPTILRALLATLLAGGAAAASAQQADGLTLAQRKNCMACHAV
GKPLMGPSFHDIARRYAPRGDAADYLAQSIVKGSVGVWGNVPMPANTQLTTAEAHTLAQWVMSLH

Sequences:

>Translated_145_residues
MQRSVHPRPTGSAPNRRLLCSYNARTVKPAVPPAENRMKPTILRALLATLLAGGAAAASAQQADGLTLAQRKNCMACHAV
GKPLMGPSFHDIARRYAPRGDAADYLAQSIVKGSVGVWGNVPMPANTQLTTAEAHTLAQWVMSLH
>Mature_145_residues
MQRSVHPRPTGSAPNRRLLCSYNARTVKPAVPPAENRMKPTILRALLATLLAGGAAAASAQQADGLTLAQRKNCMACHAV
GKPLMGPSFHDIARRYAPRGDAADYLAQSIVKGSVGVWGNVPMPANTQLTTAEAHTLAQWVMSLH

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15404; Mature: 15404

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSVHPRPTGSAPNRRLLCSYNARTVKPAVPPAENRMKPTILRALLATLLAGGAAAASA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCC
QQADGLTLAQRKNCMACHAVGKPLMGPSFHDIARRYAPRGDAADYLAQSIVKGSVGVWGN
HHCCCCCHHHHCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
VPMPANTQLTTAEAHTLAQWVMSLH
CCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRSVHPRPTGSAPNRRLLCSYNARTVKPAVPPAENRMKPTILRALLATLLAGGAAAASA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCC
QQADGLTLAQRKNCMACHAVGKPLMGPSFHDIARRYAPRGDAADYLAQSIVKGSVGVWGN
HHCCCCCHHHHCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
VPMPANTQLTTAEAHTLAQWVMSLH
CCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]