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The map label for this gene is qseB [H]

Identifier: 161523860

GI number: 161523860

Start: 744727

End: 745404

Strand: Direct

Name: qseB [H]

Synonym: Bmul_0680

Alternate gene names: 161523860

Gene position: 744727-745404 (Clockwise)

Preceding gene: 161523856

Following gene: 161523861

Centisome position: 21.6

GC content: 69.03

Gene sequence:

>678_bases
ATGGATGCGATTCCGATGCGGATTCTGCTTGTCGAAGACGACCGGATGATTGCCGAAGGCGTGCGCAAGGCGCTGCGCTC
GGACGGCTTCGCGGTCGACTGGGTGCAGGACGGCGAGTCGGCGCTCACGGCGCTCGGCGGCGAGTCCTACGACCTGCTGC
TGCTCGATCTCGGCCTGCCCAAGCGCGACGGCATCGACGTGCTGCGCACGCTGCGCGCGCGCGGGCTGTCGCTGCCGGTG
CTGATCGTCACCGCGCGCGATGCGATCGCCGATCGCGTGAAGGGCCTCGACGCGGGCGCCGACGACTATCTCGTCAAGCC
GTTCGATCTCGACGAACTCGGCGCGCGGATGCGCGCGCTGATCCGCCGGCAGGCCGGGCGCAGCGAGTCGCTGATCCGCC
ACGGCGCGCTGACGCTCGATCCGGCATCGCACCAGGTGACGCTCGACGGCGCGCCGGTCGCGCTGTCCGCGCGCGAATTC
GCGCTGCTCGAGGCGCTGCTCGCGCGGCCGGGCGCCGTGCTGTCGAAGAGCCAGCTCGAGGAGAAGATGTACGGCTGGGG
CGAGGAAATCGGCAGCAACACGGTCGAGGTCTATATCCACGCACTGCGCAAGAAGCTCGGTTCGGACCTGATCCGCAACG
TGCGCGGGCTCGGCTACATGGTCGTCAAGGAAAGCTGA

Upstream 100 bases:

>100_bases
GTAGAGACAAGTGCGACAAGTACGACGAAATCGCGGAGGGCGCGCGCGGTCGCGCGCAGGATTCGCGGCGCTACAATGGG
CGGCATCTGTCACTCGTCCC

Downstream 100 bases:

>100_bases
CGCGTGAGGTCGATTCGTCATCAACTGCTGATCTGGCTGCTCGCGATCGTCGTCGCGGGCGTGAGCGTCGCGGGCTGGCT
GATCTACCGGCAGGCGCTGG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDAIPMRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGESALTALGGESYDLLLLDLGLPKRDGIDVLRTLRARGLSLPV
LIVTARDAIADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQAGRSESLIRHGALTLDPASHQVTLDGAPVALSAREF
ALLEALLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES

Sequences:

>Translated_225_residues
MDAIPMRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGESALTALGGESYDLLLLDLGLPKRDGIDVLRTLRARGLSLPV
LIVTARDAIADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQAGRSESLIRHGALTLDPASHQVTLDGAPVALSAREF
ALLEALLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES
>Mature_225_residues
MDAIPMRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGESALTALGGESYDLLLLDLGLPKRDGIDVLRTLRARGLSLPV
LIVTARDAIADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQAGRSESLIRHGALTLDPASHQVTLDGAPVALSAREF
ALLEALLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=52.3148148148148, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1790552, Length=217, Percent_Identity=45.6221198156682, Blast_Score=193, Evalue=9e-51,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=39.3665158371041, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=39.3665158371041, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=35.1598173515982, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=39.0909090909091, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=37.8995433789954, Blast_Score=133, Evalue=9e-33,
Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=34.7826086956522, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=36.0730593607306, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=36.2068965517241, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=31.4159292035398, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=34.0909090909091, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=29.0748898678414, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1788550, Length=162, Percent_Identity=32.0987654320988, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=28.936170212766, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1790437, Length=110, Percent_Identity=36.3636363636364, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790299, Length=105, Percent_Identity=36.1904761904762, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1787487, Length=108, Percent_Identity=36.1111111111111, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=33.0578512396694, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788713, Length=92, Percent_Identity=38.0434782608696, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788521, Length=215, Percent_Identity=30.2325581395349, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI48994928, Length=121, Percent_Identity=33.8842975206612, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1788905, Length=141, Percent_Identity=28.3687943262411, Blast_Score=60, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=176, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24528; Mature: 24528

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAIPMRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGESALTALGGESYDLLLLDLGLP
CCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCC
KRDGIDVLRTLRARGLSLPVLIVTARDAIADRVKGLDAGADDYLVKPFDLDELGARMRAL
CCCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHH
IRRQAGRSESLIRHGALTLDPASHQVTLDGAPVALSAREFALLEALLARPGAVLSKSQLE
HHHHCCCHHHHHHHCCEEECCCCCEEEECCCCEEECHHHHHHHHHHHHCCCCHHHHHHHH
EKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES
HHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MDAIPMRILLVEDDRMIAEGVRKALRSDGFAVDWVQDGESALTALGGESYDLLLLDLGLP
CCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCC
KRDGIDVLRTLRARGLSLPVLIVTARDAIADRVKGLDAGADDYLVKPFDLDELGARMRAL
CCCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHH
IRRQAGRSESLIRHGALTLDPASHQVTLDGAPVALSAREFALLEALLARPGAVLSKSQLE
HHHHCCCHHHHHHHCCEEECCCCCEEEECCCCEEECHHHHHHHHHHHHCCCCHHHHHHHH
EKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES
HHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]