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The map label for this gene is dan [H]

Identifier: 161523739

GI number: 161523739

Start: 608895

End: 610376

Strand: Direct

Name: dan [H]

Synonym: Bmul_0559

Alternate gene names: 161523739

Gene position: 608895-610376 (Clockwise)

Preceding gene: 161523738

Following gene: 161523740

Centisome position: 17.66

GC content: 69.77

Gene sequence:

>1482_bases
ATGCATTCGCATCCCGAAGCCGCCGATACGCTGATCGTCGGCGCGCAACTGTACGACGGGACCGGCGCGCCGCCCGTCAC
GCGCGACGTCGCGATCCGCAACGGCATGATCGCGGCGATCGGCAACCTGTCGAACTGGCTCGCCGAAACCGTCGTCGATG
CGAACGGCCGCGCGCTCGCGCCGGGCTTCGTCGACGTTCACACGCACGACGACACGCACGTGATCCGCGCGCCGGAGATG
CTGCCGAAGATTTCGCAGGGCGTGACGACCGTGATCGTCGGCAACTGCGGGATCAGCGCGTCGCCGGTAACGCTCGCGGG
CGACCCGCCCGATCCGATGAACCTGCTCGGCGATCGCGACGCGTTTCGCTATCCGACCTTCGCCGACTATGTCGCGGCCG
TCAACGATGCACGGCCGGCGGTGAACGTCGCGGCGCTGATCGGGCATACGGCGCTGCGCAACAACCAGATGGACCGCCTC
GATCGCGCGGCAACCGACAGCGAGATTGCCGCGATGCGCACGCAGCTCGAGGAAGCGCTCGCGAACGGCGCGCTCGGATT
GTCGTCGGGCCTCGCGTACGGCTCCGCGTTTGCAGCGCCGACCGAGGAAGTGATGGCGCTCGCCGAGCCGCTCGCGAATG
CAGGCGCGCTGTACACGACGCACATGCGCACCGAGTTCGACGCGATCCTCGACGCGATGGACGAGGCCTACCGGGTCGGC
CGCCATGCACGCGTGCCGGTCGTGATCTCGCATCTGAAATGCGCGGGCCCGTCGAACTGGGGGCGCAGCACCGAAGTGCT
CGCGTCGCTCGAAGGCGCGCGCCGCTATCAGCCGGTCGGCTGCGACTGCTATCCGTACAGCCGCAGCTCGTCGACGCTCG
ACCTGAAGCAGGTGACGGGCGACATCGACATCACGATCACCTGGTCGGAGCCGCATCCGGAAGTCGCCGGCAAGCTGCTG
AAGGCGATCGCGGCCGACTGGGGCGTCACCGAGCAGGAGGCCGCGCAGCGGATTCGCCCGGCGGGCGCCGTGTACCACAA
CATGTCCGAAGACGACGTGCGCCGGATCCTCTCGCATCCGGCGACGATGGTCGGCTCGGACGGGCTGCCGAACGATCCGC
TGCCGCATCCGCGGCTGTGGGGCGCGTTCCCGCGCGTGCTCGGCCATTACGTGCGCGACACGAACCTGCTGCCGCTCGAG
GAGGCGATCCGCAAGATGACGTCGCTGTCCGCGCGCCGCTTCGGGCTTGCGCGTCGCGGCGAGGTGCACGTCGGCTACCA
CGCGGATCTCGTGCTGTTCGATCCGGCGCGCGTGATCGACGCCGCGACGTTCGACCAGCCGCAGCAGCCCGCGCACGGGA
TCGACGCGGTCTGGGTGAACGGCGTGCTGACCTACGAAAACGGCCGGCCGACCGGCGAACGCGCGGGCGGCTTCGTCGCG
CGCGGCGAACGCGCGCAGGCGAGCGCGGATGCCGCGTTCTGA

Upstream 100 bases:

>100_bases
TGCGGCTCGGCGATGCGGGCCGGGAATCGCTGCGCCGTATCAAGCATGCGCTCGACGCGCATCGCGGCGGCGGCGACCGT
CAACCGGTAGGAGACTGACC

Downstream 100 bases:

>100_bases
GCGCGGCCGATTTGCCGATATTCCGCGCGCACTGCTTGCAGCGCGCGCATTCGCAACCGAAACGGAACTGAAACAGGAGT
GAAACGATGAAGCGATATGG

Product: N-acyl-D-amino-acid deacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGMIAAIGNLSNWLAETVVDANGRALAPGFVDVHTHDDTHVIRAPEM
LPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGDRDAFRYPTFADYVAAVNDARPAVNVAALIGHTALRNNQMDRL
DRAATDSEIAAMRTQLEEALANGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGALYTTHMRTEFDAILDAMDEAYRVG
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTGDIDITITWSEPHPEVAGKLL
KAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLE
EAIRKMTSLSARRFGLARRGEVHVGYHADLVLFDPARVIDAATFDQPQQPAHGIDAVWVNGVLTYENGRPTGERAGGFVA
RGERAQASADAAF

Sequences:

>Translated_493_residues
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGMIAAIGNLSNWLAETVVDANGRALAPGFVDVHTHDDTHVIRAPEM
LPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGDRDAFRYPTFADYVAAVNDARPAVNVAALIGHTALRNNQMDRL
DRAATDSEIAAMRTQLEEALANGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGALYTTHMRTEFDAILDAMDEAYRVG
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTGDIDITITWSEPHPEVAGKLL
KAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLE
EAIRKMTSLSARRFGLARRGEVHVGYHADLVLFDPARVIDAATFDQPQQPAHGIDAVWVNGVLTYENGRPTGERAGGFVA
RGERAQASADAAF
>Mature_493_residues
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGMIAAIGNLSNWLAETVVDANGRALAPGFVDVHTHDDTHVIRAPEM
LPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGDRDAFRYPTFADYVAAVNDARPAVNVAALIGHTALRNNQMDRL
DRAATDSEIAAMRTQLEEALANGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGALYTTHMRTEFDAILDAMDEAYRVG
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTGDIDITITWSEPHPEVAGKLL
KAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHPATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLE
EAIRKMTSLSARRFGLARRGEVHVGYHADLVLFDPARVIDAATFDQPQQPAHGIDAVWVNGVLTYENGRPTGERAGGFVA
RGERAQASADAAF

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 52773; Mature: 52773

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGMIAAIGNLSNWLAETVVDANGRALA
CCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCEEC
PGFVDVHTHDDTHVIRAPEMLPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGDRD
CCEEEEECCCCCEEEECHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHCCCCC
AFRYPTFADYVAAVNDARPAVNVAALIGHTALRNNQMDRLDRAATDSEIAAMRTQLEEAL
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH
ANGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGALYTTHMRTEFDAILDAMDEAYRVG
HCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHC
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTG
CCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHCCC
DIDITITWSEPHPEVAGKLLKAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHP
CEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHCC
ATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLEEAIRKMTSLSARRFGLARRG
HHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EVHVGYHADLVLFDPARVIDAATFDQPQQPAHGIDAVWVNGVLTYENGRPTGERAGGFVA
CEEEEEECCEEEECCHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCCCCCHHCCCEEE
RGERAQASADAAF
CCCCCCCCCCCCC
>Mature Secondary Structure
MHSHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGMIAAIGNLSNWLAETVVDANGRALA
CCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCEEC
PGFVDVHTHDDTHVIRAPEMLPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGDRD
CCEEEEECCCCCEEEECHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCHHHHCCCCC
AFRYPTFADYVAAVNDARPAVNVAALIGHTALRNNQMDRLDRAATDSEIAAMRTQLEEAL
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH
ANGALGLSSGLAYGSAFAAPTEEVMALAEPLANAGALYTTHMRTEFDAILDAMDEAYRVG
HCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHC
RHARVPVVISHLKCAGPSNWGRSTEVLASLEGARRYQPVGCDCYPYSRSSSTLDLKQVTG
CCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHCCC
DIDITITWSEPHPEVAGKLLKAIAADWGVTEQEAAQRIRPAGAVYHNMSEDDVRRILSHP
CEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHCC
ATMVGSDGLPNDPLPHPRLWGAFPRVLGHYVRDTNLLPLEEAIRKMTSLSARRFGLARRG
HHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EVHVGYHADLVLFDPARVIDAATFDQPQQPAHGIDAVWVNGVLTYENGRPTGERAGGFVA
CEEEEEECCEEEECCHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCCCCCHHCCCEEE
RGERAQASADAAF
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]