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The map label for this gene is ygbL [C]

Identifier: 161523728

GI number: 161523728

Start: 598922

End: 599695

Strand: Direct

Name: ygbL [C]

Synonym: Bmul_0548

Alternate gene names: 161523728

Gene position: 598922-599695 (Clockwise)

Preceding gene: 161523727

Following gene: 161523730

Centisome position: 17.37

GC content: 64.34

Gene sequence:

>774_bases
ATGCAACGTGTACCGAACCAGCCGTTTACGCGTCCCGCCCGTTTCTCCGAAGCCGAATGGCAAGCGCGCGTGCAGCTCGC
GGCCGCTTACCGGATCTTCGATCATCTCGGCTGGACCGAGCTGATCTACAACCATATCTCGCTGCGCGTGCCGGGCGAGG
ACGGCCACTTCCTGATCAATCCGTTCGGGCTCCATTACAGCGAGGTTTGCGCGTCGAATCTCGTGAAGATCGACATCGAC
GGCAACGTGATCGGGCATTCCGACTGGCCGATCAATCCGGCCGGCTTCACGTTCCACGCGGCGATCCATGCGGCGCTGCC
CGACGCGCATTGCGTGATGCACGTGCATACGACGCCGACGATGGCCGTGTGTTGCTCGCGCGACGGCCTGTCGTTCTCGA
ATTTCTATTCGGCGCAGCTGTACGGAAAGATCGCATATCACGACTTCGAAGGGATCACCGTGCGTCTCGACGAGGGGCGC
CGGATCGTCGAGAGCGCGGGCGGGCGGCCCGTGCTGCTGCTGCGCAATCACGGCCCCGTGACGATCGGCGCGACGCTCGC
GCAGACGTTTTCGCTGATGTGGCTGCTCAACCGCGCGTGCGAGGTGCAGATCGCGACGCATGCAATCGGCGATGCGCTGC
CGATCGCGCCGCCGGTGCTCGAAGCCTGCGTGCGCGACTCGCTGAATTTCGATCCGCGACACGGTGCAGGGCAGGATGCG
TTCGATGCGCTGCAGCGCATCGTCGATCGGATCGATCCCGGCTACCGCGCGTAG

Upstream 100 bases:

>100_bases
TATGGTTGTGTGCGCAACGATACGGGCGCCGCGGCGGCGGCCTCGTTCGACAGCCGCGAAGCCGCACGCGCGGCGCTCGC
GCACGCAACCGGAGCTTCCC

Downstream 100 bases:

>100_bases
GCGCGCCCGGCGGCGCGGCGCTCAGAACCGATAGCCGAGGCCGGCCTGGATCACGTCGGTGTCGCGGTTGTAGCGCGTGA
CCACGCGGTTCCAGGTAAGG

Product: aldolase II superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLINPFGLHYSEVCASNLVKIDID
GNVIGHSDWPINPAGFTFHAAIHAALPDAHCVMHVHTTPTMAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVRLDEGR
RIVESAGGRPVLLLRNHGPVTIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEACVRDSLNFDPRHGAGQDA
FDALQRIVDRIDPGYRA

Sequences:

>Translated_257_residues
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLINPFGLHYSEVCASNLVKIDID
GNVIGHSDWPINPAGFTFHAAIHAALPDAHCVMHVHTTPTMAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVRLDEGR
RIVESAGGRPVLLLRNHGPVTIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEACVRDSLNFDPRHGAGQDA
FDALQRIVDRIDPGYRA
>Mature_257_residues
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLINPFGLHYSEVCASNLVKIDID
GNVIGHSDWPINPAGFTFHAAIHAALPDAHCVMHVHTTPTMAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVRLDEGR
RIVESAGGRPVLLLRNHGPVTIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEACVRDSLNFDPRHGAGQDA
FDALQRIVDRIDPGYRA

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826323, Length=257, Percent_Identity=39.6887159533074, Blast_Score=171, Evalue=5e-43,
Organism=Homo sapiens, GI29826325, Length=257, Percent_Identity=39.6887159533074, Blast_Score=171, Evalue=6e-43,
Organism=Homo sapiens, GI29826319, Length=256, Percent_Identity=39.84375, Blast_Score=170, Evalue=1e-42,
Organism=Homo sapiens, GI29826321, Length=257, Percent_Identity=39.6887159533074, Blast_Score=170, Evalue=1e-42,
Organism=Homo sapiens, GI89276787, Length=259, Percent_Identity=33.5907335907336, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI297307160, Length=259, Percent_Identity=33.5907335907336, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI9257190, Length=261, Percent_Identity=34.4827586206897, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI297307158, Length=261, Percent_Identity=34.4827586206897, Blast_Score=138, Evalue=4e-33,
Organism=Homo sapiens, GI9257192, Length=261, Percent_Identity=34.4827586206897, Blast_Score=138, Evalue=4e-33,
Organism=Homo sapiens, GI9943848, Length=199, Percent_Identity=37.1859296482412, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI9951927, Length=199, Percent_Identity=37.1859296482412, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI62912453, Length=199, Percent_Identity=37.1859296482412, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI115533216, Length=194, Percent_Identity=39.1752577319588, Blast_Score=146, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI115533218, Length=194, Percent_Identity=39.1752577319588, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI71989550, Length=250, Percent_Identity=33.2, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71989544, Length=250, Percent_Identity=33.2, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71989555, Length=250, Percent_Identity=33.2, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71989560, Length=250, Percent_Identity=33.2, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71989541, Length=250, Percent_Identity=33.2, Blast_Score=121, Evalue=3e-28,
Organism=Drosophila melanogaster, GI281363755, Length=207, Percent_Identity=32.3671497584541, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI281363751, Length=207, Percent_Identity=32.3671497584541, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI24655690, Length=207, Percent_Identity=32.3671497584541, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI24655685, Length=207, Percent_Identity=32.3671497584541, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281363761, Length=207, Percent_Identity=32.3671497584541, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281363759, Length=207, Percent_Identity=32.3671497584541, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281363753, Length=207, Percent_Identity=32.3671497584541, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281363763, Length=207, Percent_Identity=32.3671497584541, Blast_Score=114, Evalue=8e-26,
Organism=Drosophila melanogaster, GI281363757, Length=207, Percent_Identity=32.3671497584541, Blast_Score=114, Evalue=8e-26,
Organism=Drosophila melanogaster, GI17136738, Length=207, Percent_Identity=32.3671497584541, Blast_Score=114, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 28445; Mature: 28445

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLIN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCEEEE
PFGLHYSEVCASNLVKIDIDGNVIGHSDWPINPAGFTFHAAIHAALPDAHCVMHVHTTPT
ECCCCHHHHHHCCCEEEEECCCEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCC
MAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVRLDEGRRIVESAGGRPVLLLRNHGPV
EEEEECCCCCCHHHEEEEHEEEEEEEEECCCEEEEECCCCCHHHCCCCCEEEEEECCCCE
TIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEACVRDSLNFDPRHGAGQDA
EEHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH
FDALQRIVDRIDPGYRA
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLIN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCEEEE
PFGLHYSEVCASNLVKIDIDGNVIGHSDWPINPAGFTFHAAIHAALPDAHCVMHVHTTPT
ECCCCHHHHHHCCCEEEEECCCEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCC
MAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVRLDEGRRIVESAGGRPVLLLRNHGPV
EEEEECCCCCCHHHEEEEHEEEEEEEEECCCEEEEECCCCCHHHCCCCCEEEEEECCCCE
TIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEACVRDSLNFDPRHGAGQDA
EEHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH
FDALQRIVDRIDPGYRA
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]