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The map label for this gene is ymdC [H]

Identifier: 161523727

GI number: 161523727

Start: 597119

End: 598768

Strand: Direct

Name: ymdC [H]

Synonym: Bmul_0547

Alternate gene names: 161523727

Gene position: 597119-598768 (Clockwise)

Preceding gene: 161523726

Following gene: 161523728

Centisome position: 17.32

GC content: 69.15

Gene sequence:

>1650_bases
GTGCTCATCTCCCTTATCCGGCGCGCACCGGCCGCCGGTTCGCCCGTCGGTGCATCGCCGGCCGTCCGTTGCGTGCGCAC
GCGCATCGCGCGCCTGCTGACCGTGTTCGCGCTGCTGCCGCTCGTCGCCGCATGCGCGACGCATCCGCCTGCCACCGCAC
TCGAACGTTCGGTGTCGCACGCGCTGCCGCAGAGCACCGCGACGCCGCTGCGCGACGCGCTCGCCGCGCCGCAGGCCGCG
CATCCGGGCCAGTCGGGCTTCCGGCTTCTCGCCGACGGCGCCGAGGCGCTGCAGATGCGCATCGCGCTCGCGCGCGCGGC
GACGAAGACGCTCGACATGCAGTACTACATCGCGACCGAGGACACGACCGGCAAGCTGCTGCTCGGCGCGGCGCTCTACG
CGGCCGACCGCGGCGTGCGCGTGCGGATGCTCGTCGACGATCTGAACTTCCACGACATCGACCGCGTGATGGCCGCGCTG
AACACGCACGAGAACATCGAGATCCGCGTGTTCAATCCGTTCGGCGCGTCGCGGCAGGGCGTCATGCAGCGCACGACCGA
CTTCCTCACGCGCATCGACAGCTTCACGCGCCGCATGCACAACAAGGCGATGATCGCGGACAACCAGATCGCGATCGTCG
GCGGCCGCAACCTCGGCGACGAGTATTTCAGCGCGAGCGCGACGCTGCAGTTCCGCGATCTCGACGTGCTCGCGGCCGGC
CCCGTGACCGACGACATCTCGCACAGCTTCGACACGTACTGGGCGAGCGCGAGCAGCTATCCGCTGCGCGTGCTGAATCA
CCAGACGTTCAAGCCGAAGGAGCTCGACGCGATGCGCGACGAGCTGCGCGAGCACTGGCGCAAGAACGCCGATCCGTACA
ACGCGAAGCCGCTGAACGCGACGCCGCTGTCGCAGCAGATCGCGCGCGACGAGCTCGGGCTCGTATGGGCGCCGGCCGAG
TTCAAGGTCGACGCGCCCGACAAGATCGCGCGGCCGAACGATCAGTACGTGAGCCCGCCGATGCAGCGTCTCGTCGAACT
CACGCGCGCCGCGCAGCAGGAATTCCTCGCGTTCTCGCCGTATTTCGTGCCGCACGATGCGGGCGTGAAGATCCTCGGCG
ATACCGCCGCGCGCGGCGTACGCGTCGCGATCCTGACGAATTCGCTCGCCGCGACCGACGCGGTGGCCGTGCAGGCCGGC
TACGCGCCGTATCGCGTGCCGCTGCTGCAGCGCGGCATCGAGCTGTACGAGTTCAAGGCGCAGCCGGATCAGCCGCGGGC
GCGCCTGTTCGGCTCCCGTTCGCGCGCAAGCCTGCATGCGAAGGCGTACGTGATCGACCGCAAGATCCTCGTGATCGGCT
CGCTGAACCTCGATCCGCGCTCCGCGCATCTGAACACCGAGCTGGCGCTCGTGATCCACAGTCCGGCGCTCGCGCAGCAG
ACTGCCGCACTGTTCGCGCGTGCGACGCAGCCGGACGAGAGCTATCGCGTGACGCTCGTGAAGGCGCCCGGCGGCGGGCC
GCCGTCGCTCGAATGGACGGGCGTCGACAACGGGCAGCCGAGCACCTATCACGTCGATCCGCATGCAGGGCTGCTGCGCA
ACGTCATGACGGGCATCTTCACGCTGCTGCCGGTCGACGACCAGCTTTAA

Upstream 100 bases:

>100_bases
TTGACCGCTTCGCCGGGCGCCCACTAGAATCGGCCGAAACCGCCCGTCAGCCGCGCGCCGCGGCGAGTGCGACCCATTGA
TCAGCCCGTCGAGGAAGCTC

Downstream 100 bases:

>100_bases
AGGGCGCGAGCGCGTCGGCGAAAACCGCGATACCGGCGCGCGGGAATCGGTGCTATGGTTGTGTGCGCAACGATACGGGC
GCCGCGGCGGCGGCCTCGTT

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MLISLIRRAPAAGSPVGASPAVRCVRTRIARLLTVFALLPLVAACATHPPATALERSVSHALPQSTATPLRDALAAPQAA
HPGQSGFRLLADGAEALQMRIALARAATKTLDMQYYIATEDTTGKLLLGAALYAADRGVRVRMLVDDLNFHDIDRVMAAL
NTHENIEIRVFNPFGASRQGVMQRTTDFLTRIDSFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASATLQFRDLDVLAAG
PVTDDISHSFDTYWASASSYPLRVLNHQTFKPKELDAMRDELREHWRKNADPYNAKPLNATPLSQQIARDELGLVWAPAE
FKVDAPDKIARPNDQYVSPPMQRLVELTRAAQQEFLAFSPYFVPHDAGVKILGDTAARGVRVAILTNSLAATDAVAVQAG
YAPYRVPLLQRGIELYEFKAQPDQPRARLFGSRSRASLHAKAYVIDRKILVIGSLNLDPRSAHLNTELALVIHSPALAQQ
TAALFARATQPDESYRVTLVKAPGGGPPSLEWTGVDNGQPSTYHVDPHAGLLRNVMTGIFTLLPVDDQL

Sequences:

>Translated_549_residues
MLISLIRRAPAAGSPVGASPAVRCVRTRIARLLTVFALLPLVAACATHPPATALERSVSHALPQSTATPLRDALAAPQAA
HPGQSGFRLLADGAEALQMRIALARAATKTLDMQYYIATEDTTGKLLLGAALYAADRGVRVRMLVDDLNFHDIDRVMAAL
NTHENIEIRVFNPFGASRQGVMQRTTDFLTRIDSFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASATLQFRDLDVLAAG
PVTDDISHSFDTYWASASSYPLRVLNHQTFKPKELDAMRDELREHWRKNADPYNAKPLNATPLSQQIARDELGLVWAPAE
FKVDAPDKIARPNDQYVSPPMQRLVELTRAAQQEFLAFSPYFVPHDAGVKILGDTAARGVRVAILTNSLAATDAVAVQAG
YAPYRVPLLQRGIELYEFKAQPDQPRARLFGSRSRASLHAKAYVIDRKILVIGSLNLDPRSAHLNTELALVIHSPALAQQ
TAALFARATQPDESYRVTLVKAPGGGPPSLEWTGVDNGQPSTYHVDPHAGLLRNVMTGIFTLLPVDDQL
>Mature_549_residues
MLISLIRRAPAAGSPVGASPAVRCVRTRIARLLTVFALLPLVAACATHPPATALERSVSHALPQSTATPLRDALAAPQAA
HPGQSGFRLLADGAEALQMRIALARAATKTLDMQYYIATEDTTGKLLLGAALYAADRGVRVRMLVDDLNFHDIDRVMAAL
NTHENIEIRVFNPFGASRQGVMQRTTDFLTRIDSFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASATLQFRDLDVLAAG
PVTDDISHSFDTYWASASSYPLRVLNHQTFKPKELDAMRDELREHWRKNADPYNAKPLNATPLSQQIARDELGLVWAPAE
FKVDAPDKIARPNDQYVSPPMQRLVELTRAAQQEFLAFSPYFVPHDAGVKILGDTAARGVRVAILTNSLAATDAVAVQAG
YAPYRVPLLQRGIELYEFKAQPDQPRARLFGSRSRASLHAKAYVIDRKILVIGSLNLDPRSAHLNTELALVIHSPALAQQ
TAALFARATQPDESYRVTLVKAPGGGPPSLEWTGVDNGQPSTYHVDPHAGLLRNVMTGIFTLLPVDDQL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=473, Percent_Identity=37.6321353065539, Blast_Score=273, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59974; Mature: 59974

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISLIRRAPAAGSPVGASPAVRCVRTRIARLLTVFALLPLVAACATHPPATALERSVSH
CHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ALPQSTATPLRDALAAPQAAHPGQSGFRLLADGAEALQMRIALARAATKTLDMQYYIATE
HCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEEC
DTTGKLLLGAALYAADRGVRVRMLVDDLNFHDIDRVMAALNTHENIEIRVFNPFGASRQG
CCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH
VMQRTTDFLTRIDSFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASATLQFRDLDVLAAG
HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHCCCEEEEEECEEEEECC
PVTDDISHSFDTYWASASSYPLRVLNHQTFKPKELDAMRDELREHWRKNADPYNAKPLNA
CCCCHHHCCHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TPLSQQIARDELGLVWAPAEFKVDAPDKIARPNDQYVSPPMQRLVELTRAAQQEFLAFSP
CCHHHHHHHHCCCEEECCCCEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECC
YFVPHDAGVKILGDTAARGVRVAILTNSLAATDAVAVQAGYAPYRVPLLQRGIELYEFKA
EECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHEEECCCCCEECHHHHCCCEEEEECC
QPDQPRARLFGSRSRASLHAKAYVIDRKILVIGSLNLDPRSAHLNTELALVIHSPALAQQ
CCCCCHHHHCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHHH
TAALFARATQPDESYRVTLVKAPGGGPPSLEWTGVDNGQPSTYHVDPHAGLLRNVMTGIF
HHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHH
TLLPVDDQL
EEECCCCCC
>Mature Secondary Structure
MLISLIRRAPAAGSPVGASPAVRCVRTRIARLLTVFALLPLVAACATHPPATALERSVSH
CHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ALPQSTATPLRDALAAPQAAHPGQSGFRLLADGAEALQMRIALARAATKTLDMQYYIATE
HCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEEC
DTTGKLLLGAALYAADRGVRVRMLVDDLNFHDIDRVMAALNTHENIEIRVFNPFGASRQG
CCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH
VMQRTTDFLTRIDSFTRRMHNKAMIADNQIAIVGGRNLGDEYFSASATLQFRDLDVLAAG
HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHCCCEEEEEECEEEEECC
PVTDDISHSFDTYWASASSYPLRVLNHQTFKPKELDAMRDELREHWRKNADPYNAKPLNA
CCCCHHHCCHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TPLSQQIARDELGLVWAPAEFKVDAPDKIARPNDQYVSPPMQRLVELTRAAQQEFLAFSP
CCHHHHHHHHCCCEEECCCCEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECC
YFVPHDAGVKILGDTAARGVRVAILTNSLAATDAVAVQAGYAPYRVPLLQRGIELYEFKA
EECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHEEECCCCCEECHHHHCCCEEEEECC
QPDQPRARLFGSRSRASLHAKAYVIDRKILVIGSLNLDPRSAHLNTELALVIHSPALAQQ
CCCCCHHHHCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHHH
TAALFARATQPDESYRVTLVKAPGGGPPSLEWTGVDNGQPSTYHVDPHAGLLRNVMTGIF
HHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHH
TLLPVDDQL
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]