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The map label for this gene is petC [H]

Identifier: 161523526

GI number: 161523526

Start: 373455

End: 374213

Strand: Direct

Name: petC [H]

Synonym: Bmul_0346

Alternate gene names: 161523526

Gene position: 373455-374213 (Clockwise)

Preceding gene: 161523525

Following gene: 161523527

Centisome position: 10.83

GC content: 62.19

Gene sequence:

>759_bases
ATGAAGAAACTGCTTTCGACGCTCGCGCTGATCGGCGCGACTGCGTGTGCGCTGCTGGGCGCGCCCGCCGCGTCGGCGGA
GGGCAATTTTCCGCTCGACCGGGCGCCCGATAACACGGAAAATCTCGTTTCGCTTCAGCACGGCGCGCAATTGTTTGTAA
ACTATTGCCTGAACTGCCATAGCGCGAACCTGATGCGCTACAACCGTCTGACGGATCTGGGCATATCCCAGAAGGAGATC
GAAAAGAATCTCCTGTTCACGACCGACAAGGTCGGCAACACGATGACCGTCGCGATGCGGCCCGAAGACGCGAAGAACTG
GCTCGGCACCACGCCGCCCGACCTGTCGGTCGAGGAGCGCGCGCGCGGCCGCGACTGGCTGTATACGTATCTGCGGAGTT
TCTACCGCGACGATACGCGGCCGACCGGCTGGAACAACGCGGTGTTCGAGAACGTCGGCATGCCCCATGTGCTCTGGCAG
TTGCAGGGGCAGCGCGCCGCGAAATTCGAGGAAAAGACGGACGAGGAGACGGGCGAGAAGGTGCGTACGCTCGTCGGCTT
TCAGCAGGTCACGCCGGGCACGCTGTCGCCGCCCGATTATGATGCTGCCGTTGCCGACCTGGTGGCGTACATGACGTGGA
TGGCCGAGCCGGCTCAGCAGACCCGCAAGCGCCTCGGCGTATGGGTGCTGATCTTTCTCGGTGTCCTGACTTTCCTGGCC
TGGCGGCTCAATGCCGCGTACTGGAAAGATATCAAGTAA

Upstream 100 bases:

>100_bases
CTTCCTCGGCATGCCGGTCTGGACGCCGCTTGGCACGTTCAAGCAGCCGCCGGAACGGGTGCGCTTCAAGCCCCATTAAC
GTGAGCGAGGAGAGAACGAC

Downstream 100 bases:

>100_bases
TCACGCCTGACCGGCGTGGGGCCGGCGCAACGCGAAACTCGCGCAACGGGTTTCGCCGCGCGCCGGCCCTCGGCTTTTTT
GAGGAAACGCAAATATGATG

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKKLLSTLALIGATACALLGAPAASAEGNFPLDRAPDNTENLVSLQHGAQLFVNYCLNCHSANLMRYNRLTDLGISQKEI
EKNLLFTTDKVGNTMTVAMRPEDAKNWLGTTPPDLSVEERARGRDWLYTYLRSFYRDDTRPTGWNNAVFENVGMPHVLWQ
LQGQRAAKFEEKTDEETGEKVRTLVGFQQVTPGTLSPPDYDAAVADLVAYMTWMAEPAQQTRKRLGVWVLIFLGVLTFLA
WRLNAAYWKDIK

Sequences:

>Translated_252_residues
MKKLLSTLALIGATACALLGAPAASAEGNFPLDRAPDNTENLVSLQHGAQLFVNYCLNCHSANLMRYNRLTDLGISQKEI
EKNLLFTTDKVGNTMTVAMRPEDAKNWLGTTPPDLSVEERARGRDWLYTYLRSFYRDDTRPTGWNNAVFENVGMPHVLWQ
LQGQRAAKFEEKTDEETGEKVRTLVGFQQVTPGTLSPPDYDAAVADLVAYMTWMAEPAQQTRKRLGVWVLIFLGVLTFLA
WRLNAAYWKDIK
>Mature_252_residues
MKKLLSTLALIGATACALLGAPAASAEGNFPLDRAPDNTENLVSLQHGAQLFVNYCLNCHSANLMRYNRLTDLGISQKEI
EKNLLFTTDKVGNTMTVAMRPEDAKNWLGTTPPDLSVEERARGRDWLYTYLRSFYRDDTRPTGWNNAVFENVGMPHVLWQ
LQGQRAAKFEEKTDEETGEKVRTLVGFQQVTPGTLSPPDYDAAVADLVAYMTWMAEPAQQTRKRLGVWVLIFLGVLTFLA
WRLNAAYWKDIK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 28362; Mature: 28362

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLSTLALIGATACALLGAPAASAEGNFPLDRAPDNTENLVSLQHGAQLFVNYCLNCH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
SANLMRYNRLTDLGISQKEIEKNLLFTTDKVGNTMTVAMRPEDAKNWLGTTPPDLSVEER
CCCHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCHHHHCCCCCCCCCCHHHH
ARGRDWLYTYLRSFYRDDTRPTGWNNAVFENVGMPHVLWQLQGQRAAKFEEKTDEETGEK
HCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHCCCHHHHHHHHCCHHHHHH
VRTLVGFQQVTPGTLSPPDYDAAVADLVAYMTWMAEPAQQTRKRLGVWVLIFLGVLTFLA
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
WRLNAAYWKDIK
HHHHHHHHCCCC
>Mature Secondary Structure
MKKLLSTLALIGATACALLGAPAASAEGNFPLDRAPDNTENLVSLQHGAQLFVNYCLNCH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
SANLMRYNRLTDLGISQKEIEKNLLFTTDKVGNTMTVAMRPEDAKNWLGTTPPDLSVEER
CCCHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCHHHHCCCCCCCCCCHHHH
ARGRDWLYTYLRSFYRDDTRPTGWNNAVFENVGMPHVLWQLQGQRAAKFEEKTDEETGEK
HCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHCCCHHHHHHHHCCHHHHHH
VRTLVGFQQVTPGTLSPPDYDAAVADLVAYMTWMAEPAQQTRKRLGVWVLIFLGVLTFLA
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
WRLNAAYWKDIK
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA