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The map label for this gene is petB [H]

Identifier: 161523525

GI number: 161523525

Start: 372054

End: 373433

Strand: Direct

Name: petB [H]

Synonym: Bmul_0345

Alternate gene names: 161523525

Gene position: 372054-373433 (Clockwise)

Preceding gene: 161523524

Following gene: 161523526

Centisome position: 10.79

GC content: 62.25

Gene sequence:

>1380_bases
ATGGCCGACAACAAGGAAGTCTCCACGACAGGTCTCACCGGCTGGATCGACCAGCGCTTCCCGCTGACGACCACCTGGAA
GAAGCACGTTTCCGAATACTACGCGCCGAAGAACTTCAACTTCTGGTACTTCTTCGGCTCGCTCGCGCTACTGGTGCTCG
TCAACCAGATCGTCACCGGCATCTTCCTGACGATGAACTACAAGCCCGACTCGATGCTCGCGTTTGCATCGGTCGAGTAC
ATCATGCGCGAGGTGCCGTGGGGCTGGCTGATCCGCTACATGCACTCGACGGGCGCCTCGATGTTCTTCGTCGTCGTGTA
TCTGCACATGTTCCGCGGCCTGATGTACGGCTCGTACCGCAAGCCGCGCGAACTCGTCTGGATCTTCGGCTGCGCGATCT
TCCTCTGCCTGATGGCCGAGGCGTTCTTCGGCTATCTGTTGCCCTGGGGCCAGATGTCGTTCTGGGGCGCGCAGGTGATC
GTGAACCTGTTCTCGGCGATCCCGTTCGTCGGCCCCGACCTGTCGCTGTGGATTCGCGGCGACTACGTCGTGTCGGACGT
CACGCTGAACCGCTTCTTCGCATTCCACGTGATCGCGATTCCGCTCGTGCTGGTCGGGCTCGTCGTCGCGCACCTCGTCG
CGCTGCACGAGGTCGGATCGAACAACCCCGACGGCATCGAGATCAAGGCGAAGAAAGACGCGAACGGCATTCCGCTCGAC
GGCATCCCGTTCCATCCGTACTACTCGGTGCACGACTTCTTCGGCGTCTGCGTGTTCCTGATGGTGTTCGCGCTGATCGT
GTTCTTCGCGCCGGAAATGGGCGGCTACTTCCTCGAGTCGAACAACTTCGTGCCGGCGAACCCGCTGCAGACACCGCCCG
AAATCGCGCCGGTCTGGTACTTCACGGCGTTCTACGCGATGCTGCGCGCGACCACCGACCCGTTCAAGATAGTGCTGATG
ATCGTGATCGCGCTGCTCGGCGTGCTTGCGCTGATCCGCGCGCGCGGCAAGTGGAAGATCGGTCTGCCGGTGCTGGCCGC
GGCGATCGTCGTGTTCATGTATCTGACGGAGTCGAAGTTCTGGGGCGTCGTCGTGATGGGTTCGGCGGTGATCACGCTGT
TCTTCCTGCCGTGGCTCGACCGCAGTCCGGTGAAGTCCATTCGCTATCGGCCGCTGTTCCACAAGGTGTTCCTCGGGATC
TTCGTCGCCGCCTTCCTGACCCTCGCGTTCCTCGGCACACGGCCGCCATCCCCGGCTGCGACGCTGATTGCGCAGGGCTG
CGCGCTGATCTATTTCGCGTTCTTCCTCGGCATGCCGGTCTGGACGCCGCTTGGCACGTTCAAGCAGCCGCCGGAACGGG
TGCGCTTCAAGCCCCATTAA

Upstream 100 bases:

>100_bases
TCAAGAACAAGCCGGCGCCTCAGAATCTCGACATCCCGCCCTATATGTTCACGTCGGCGACGACCCTCGTGATCGGCAAG
GACGAGAAAGGAGAAGCGTG

Downstream 100 bases:

>100_bases
CGTGAGCGAGGAGAGAACGACATGAAGAAACTGCTTTCGACGCTCGCGCTGATCGGCGCGACTGCGTGTGCGCTGCTGGG
CGCGCCCGCCGCGTCGGCGG

Product: cytochrome b/b6 domain-containing protein

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MADNKEVSTTGLTGWIDQRFPLTTTWKKHVSEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDSMLAFASVEY
IMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQVI
VNLFSAIPFVGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLVGLVVAHLVALHEVGSNNPDGIEIKAKKDANGIPLD
GIPFHPYYSVHDFFGVCVFLMVFALIVFFAPEMGGYFLESNNFVPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVLM
IVIALLGVLALIRARGKWKIGLPVLAAAIVVFMYLTESKFWGVVVMGSAVITLFFLPWLDRSPVKSIRYRPLFHKVFLGI
FVAAFLTLAFLGTRPPSPAATLIAQGCALIYFAFFLGMPVWTPLGTFKQPPERVRFKPH

Sequences:

>Translated_459_residues
MADNKEVSTTGLTGWIDQRFPLTTTWKKHVSEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDSMLAFASVEY
IMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQVI
VNLFSAIPFVGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLVGLVVAHLVALHEVGSNNPDGIEIKAKKDANGIPLD
GIPFHPYYSVHDFFGVCVFLMVFALIVFFAPEMGGYFLESNNFVPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVLM
IVIALLGVLALIRARGKWKIGLPVLAAAIVVFMYLTESKFWGVVVMGSAVITLFFLPWLDRSPVKSIRYRPLFHKVFLGI
FVAAFLTLAFLGTRPPSPAATLIAQGCALIYFAFFLGMPVWTPLGTFKQPPERVRFKPH
>Mature_458_residues
ADNKEVSTTGLTGWIDQRFPLTTTWKKHVSEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDSMLAFASVEYI
MREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQVIV
NLFSAIPFVGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLVGLVVAHLVALHEVGSNNPDGIEIKAKKDANGIPLDG
IPFHPYYSVHDFFGVCVFLMVFALIVFFAPEMGGYFLESNNFVPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVLMI
VIALLGVLALIRARGKWKIGLPVLAAAIVVFMYLTESKFWGVVVMGSAVITLFFLPWLDRSPVKSIRYRPLFHKVFLGIF
VAAFLTLAFLGTRPPSPAATLIAQGCALIYFAFFLGMPVWTPLGTFKQPPERVRFKPH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=402, Percent_Identity=38.5572139303483, Blast_Score=254, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6226529, Length=401, Percent_Identity=40.3990024937656, Blast_Score=250, Evalue=3e-67,
Organism=Saccharomyces cerevisiae, GI6226532, Length=241, Percent_Identity=48.1327800829876, Blast_Score=211, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=53.2894736842105, Blast_Score=152, Evalue=8e-38,
Organism=Saccharomyces cerevisiae, GI6226530, Length=137, Percent_Identity=48.9051094890511, Blast_Score=122, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 51967; Mature: 51836

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure 
ADNKEVSTTGLTGWIDQRFPLTTTWKKHVSEYYAPKNFNFWYFFGSLALLVLVNQIVTG
CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IFLTMNYKPDSMLAFASVEYIMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYR
EEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
KPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQVIVNLFSAIPFVGPDLSLWIRG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
DYVVSDVTLNRFFAFHVIAIPLVLVGLVVAHLVALHEVGSNNPDGIEIKAKKDANGIPLD
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
GIPFHPYYSVHDFFGVCVFLMVFALIVFFAPEMGGYFLESNNFVPANPLQTPPEIAPVWY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHH
FTAFYAMLRATTDPFKIVLMIVIALLGVLALIRARGKWKIGLPVLAAAIVVFMYLTESKF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHCCCC
WGVVVMGSAVITLFFLPWLDRSPVKSIRYRPLFHKVFLGIFVAAFLTLAFLGTRPPSPAA
CHHEEHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
TLIAQGCALIYFAFFLGMPVWTPLGTFKQPPERVRFKPH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA