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The map label for this gene is ompW [H]

Identifier: 161523394

GI number: 161523394

Start: 237122

End: 237955

Strand: Reverse

Name: ompW [H]

Synonym: Bmul_0214

Alternate gene names: 161523394

Gene position: 237955-237122 (Counterclockwise)

Preceding gene: 161523395

Following gene: 161523392

Centisome position: 6.9

GC content: 67.51

Gene sequence:

>834_bases
ATGAAGAAGACCTTCCTGTGCGCGGCGGCCGGCGCCGCCGCGCTGGCGCCGCTCGCGGCCCACGCACAGAGCGCCGGCAG
CAACGTCGTCACGCTCGGCTGGTTCCACGTGATGCCGCAGCAGAGCAGCACGCCGATGACGACCAACGTCGCCCCGACAC
CGATCAACACGCCGCTGCGGCTGCCGCCGTCGTTCACGTCGCCCGGCACCGGGCTGCACACGAGCGGCGCGGACACCGTC
GGGCTGACGGTCAGCCACTTTCTGACCGACCACATCGCGGTCACCTCGGTCGCCGGCGTGCCGCCGGTGTTCAAGGTGTC
GGGCAAGGGCACGATCAATCCGCCGGGCCCGGCCGGCGCGCTCGGCACGCAGAATATCGGGATCGCGGCGGTCAACCCGA
TCGTGAAGAGTGTGCGGCAATGGAGCCCGGCGGTGCTGCTGCAGTACTACTTCGGGCAGGCCACCGCGCGGTTCCGGCCG
TTCCTCGGGCTCGGCGTGTCGTACAACTGGTTCAGCGACCTGCAGCTCAACTCGAACTTCATCAAGCAGACGCAGGACAA
CCTCGGCGCGATTCTCGCGGCAGGCGCCGGCAAGCCGGGCACGACATCGGTGGAAGCGAAGGCGTCGTCGTCGTGGCAGC
CGGTGTTCAACGCGGGCGTGCAGTACAACATGACCGAGCATTTCGGGCTGGTCGCGTCGGTGACCTACATCCCGCTGAAG
ACGACGTCGACGGTGACGATCAAGGCGGCCGACGGTACGGTGCTCGCGGAATCGAAGTCGGAGCTGAAGGCCGATCCGAT
CATCAGCTACGTCGGGCTGACCTACAAGTTCTGA

Upstream 100 bases:

>100_bases
GTTCATCTTCACGGGCGGCGTGTTCGGCTTCCTCGACAACGCGGGTTCGACGCCGTATTTCACGATCGGCGCGTTCGTCC
AGTAAGCGGAGGCTGCCGTG

Downstream 100 bases:

>100_bases
TGCCGGGCCGCACCGGCGGCGGCGCAGCGGCTCGCCCGCGGCCGGCGCGCAGGCAAAAAAAAGCCCGCCTTGAGAGGCGG
GCTGAATCCATATCAGAGGA

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKTFLCAAAGAAALAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLRLPPSFTSPGTGLHTSGADTV
GLTVSHFLTDHIAVTSVAGVPPVFKVSGKGTINPPGPAGALGTQNIGIAAVNPIVKSVRQWSPAVLLQYYFGQATARFRP
FLGLGVSYNWFSDLQLNSNFIKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGVQYNMTEHFGLVASVTYIPLK
TTSTVTIKAADGTVLAESKSELKADPIISYVGLTYKF

Sequences:

>Translated_277_residues
MKKTFLCAAAGAAALAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLRLPPSFTSPGTGLHTSGADTV
GLTVSHFLTDHIAVTSVAGVPPVFKVSGKGTINPPGPAGALGTQNIGIAAVNPIVKSVRQWSPAVLLQYYFGQATARFRP
FLGLGVSYNWFSDLQLNSNFIKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGVQYNMTEHFGLVASVTYIPLK
TTSTVTIKAADGTVLAESKSELKADPIISYVGLTYKF
>Mature_277_residues
MKKTFLCAAAGAAALAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLRLPPSFTSPGTGLHTSGADTV
GLTVSHFLTDHIAVTSVAGVPPVFKVSGKGTINPPGPAGALGTQNIGIAAVNPIVKSVRQWSPAVLLQYYFGQATARFRP
FLGLGVSYNWFSDLQLNSNFIKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGVQYNMTEHFGLVASVTYIPLK
TTSTVTIKAADGTVLAESKSELKADPIISYVGLTYKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 28817; Mature: 28817

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTFLCAAAGAAALAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLR
CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCC
LPPSFTSPGTGLHTSGADTVGLTVSHFLTDHIAVTSVAGVPPVFKVSGKGTINPPGPAGA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
LGTQNIGIAAVNPIVKSVRQWSPAVLLQYYFGQATARFRPFLGLGVSYNWFSDLQLNSNF
CCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCEEECCCCCCCCCCEEECCHH
IKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGVQYNMTEHFGLVASVTYIPLK
HHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCHHHHCCEEECCHHHCCEEEEEEEEEEE
TTSTVTIKAADGTVLAESKSELKADPIISYVGLTYKF
CCCEEEEEECCCEEEECCHHHCCCCCEEEEECEEECC
>Mature Secondary Structure
MKKTFLCAAAGAAALAPLAAHAQSAGSNVVTLGWFHVMPQQSSTPMTTNVAPTPINTPLR
CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCC
LPPSFTSPGTGLHTSGADTVGLTVSHFLTDHIAVTSVAGVPPVFKVSGKGTINPPGPAGA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
LGTQNIGIAAVNPIVKSVRQWSPAVLLQYYFGQATARFRPFLGLGVSYNWFSDLQLNSNF
CCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCEEECCCCCCCCCCEEECCHH
IKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGVQYNMTEHFGLVASVTYIPLK
HHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCHHHHCCEEECCHHHCCEEEEEEEEEEE
TTSTVTIKAADGTVLAESKSELKADPIISYVGLTYKF
CCCEEEEEECCCEEEECCHHHCCCCCEEEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]