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The map label for this gene is ydeR [H]

Identifier: 161523392

GI number: 161523392

Start: 234598

End: 235881

Strand: Reverse

Name: ydeR [H]

Synonym: Bmul_0212

Alternate gene names: 161523392

Gene position: 235881-234598 (Counterclockwise)

Preceding gene: 161523394

Following gene: 161523389

Centisome position: 6.84

GC content: 75.62

Gene sequence:

>1284_bases
ATGAACTGCCCTGCCCCTTCCTGTCCCGGCGCCGCGCGCGCGGCGCACGACGCCCGGCCGACGCTGAGCGCCGGCATGAC
GCTCTTCTTCGCGGCGACGGTCGGCGTGATCGTGATCGACCTGTTCGCCGCGCAACCGCTGACGGGCCCGATCAGCGCCG
ACCTGCAGCTGCCCGCGAGCCTCGCCGGGCTCGTCGCGATGCTGCCGCAGCTCGGCTACGCGGCCGGGCTCGCGCTGCTC
GTGCCGCTCGTCGATCTGCTCGAGAACCGCCGCGTGATCGTGGCGACGCTCGCCGTATGCGCGGCGATGCTCGCGCTGCC
GGCCGTCACGCACTCGGGCACGGTGTTTCTGTGCGCGACGCTGATCGCGGGCGCCGCGTCGAGCGTGATCCAGATGCTGG
TGCCGATGGCGGCGTCGATGGCGCCGGAAGCGCAGCGCGGGCGCGCCGTCGGCAACGTGATGAGCGGGTTGATGCTCGGC
ATTCTGCTGTCGCGGCCGCTCGCGAGCCTGATCGCGGGCTCGATCGGCTGGCGCGCGTTCTATGCGCTCGCCGCCGCGGC
CGACGTCGCGATCGCCGCCGTGCTGGCGCTGCGACTGCCGACGCGCACGCCGCCCGTCACGGCGAGCTACCGCGCGCTGC
TCGCATCGATGGGACGGCTGCTCGCCGACGAACCGGTGCTGCGGCGGCATGCGCTCTCGGCCGCGCTCGCGATGGCCGCG
TTCAGCGCGTTCTGGACGGCGATCGGATTGCGGCTCGCGCAGCCGCCGTTCGGCCTCGACCTGCACGGAATCGCGCTGTT
CGCGTTCGCCGGCGCGAGCGGCGCGATCGTCACGCCGCTCGCCGGTCGCGCCGGCGACAGCGGGCGCGGGCCGCTCGCGC
AGCGCGCCGCGTTCGGCGCCATGCTCGCGGCGCTCGTCGTGCTCGGCATCGCGGGCGCCGGCTGGCTCGGCTTCGACGCG
CACGCGCACCGCGGCCTCGCGCTGGCGCTGCTGGCCGGCGGCGCGGCGCTGCTCGATGCGGGCGTGATCGTCGACCAGAC
GCTCGGCCGCCGGGCGATCAACCTGCTGAATCCGGCCGCGCGCGGGCGCCTGAACGGCCTGTTCGTCGGGCTGTTCTTCG
TCGGCGGCGCGATCGGCGCGGCGCTCGCGGGCAGCGCATGGGCGTGGGGCGGCTGGAGCGCCGTGTGCACGGTCGCGCTC
GTCTTCGCCGGCGCATCGGGCCTGGCCGGGCGGTCCGCCGTGCGCGCGACCGGCAGCGCGGCACTGCCCGACACGCAGAC
CTGA

Upstream 100 bases:

>100_bases
CAAAGCAAACTCGCATAATGATGTTAGAGATATTTCAATTGTCGCATAACGTGACGCCGCCTAGGATGGGGTTTCCTTCG
ACTATTCCGGTGGCCCTTCC

Downstream 100 bases:

>100_bases
AAGACGAACGCCCCGCCCTCCGACGAGGCGCGGGGCGTTCGGTGTGGGTCGTTCGGCGCGCGGCGGCGGTGCGAATCAGT
GGCGGACCAGCGCCATCATC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNCPAPSCPGAARAAHDARPTLSAGMTLFFAATVGVIVIDLFAAQPLTGPISADLQLPASLAGLVAMLPQLGYAAGLALL
VPLVDLLENRRVIVATLAVCAAMLALPAVTHSGTVFLCATLIAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLG
ILLSRPLASLIAGSIGWRAFYALAAAADVAIAAVLALRLPTRTPPVTASYRALLASMGRLLADEPVLRRHALSAALAMAA
FSAFWTAIGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDSGRGPLAQRAAFGAMLAALVVLGIAGAGWLGFDA
HAHRGLALALLAGGAALLDAGVIVDQTLGRRAINLLNPAARGRLNGLFVGLFFVGGAIGAALAGSAWAWGGWSAVCTVAL
VFAGASGLAGRSAVRATGSAALPDTQT

Sequences:

>Translated_427_residues
MNCPAPSCPGAARAAHDARPTLSAGMTLFFAATVGVIVIDLFAAQPLTGPISADLQLPASLAGLVAMLPQLGYAAGLALL
VPLVDLLENRRVIVATLAVCAAMLALPAVTHSGTVFLCATLIAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLG
ILLSRPLASLIAGSIGWRAFYALAAAADVAIAAVLALRLPTRTPPVTASYRALLASMGRLLADEPVLRRHALSAALAMAA
FSAFWTAIGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDSGRGPLAQRAAFGAMLAALVVLGIAGAGWLGFDA
HAHRGLALALLAGGAALLDAGVIVDQTLGRRAINLLNPAARGRLNGLFVGLFFVGGAIGAALAGSAWAWGGWSAVCTVAL
VFAGASGLAGRSAVRATGSAALPDTQT
>Mature_427_residues
MNCPAPSCPGAARAAHDARPTLSAGMTLFFAATVGVIVIDLFAAQPLTGPISADLQLPASLAGLVAMLPQLGYAAGLALL
VPLVDLLENRRVIVATLAVCAAMLALPAVTHSGTVFLCATLIAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLG
ILLSRPLASLIAGSIGWRAFYALAAAADVAIAAVLALRLPTRTPPVTASYRALLASMGRLLADEPVLRRHALSAALAMAA
FSAFWTAIGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDSGRGPLAQRAAFGAMLAALVVLGIAGAGWLGFDA
HAHRGLALALLAGGAALLDAGVIVDQTLGRRAINLLNPAARGRLNGLFVGLFFVGGAIGAALAGSAWAWGGWSAVCTVAL
VFAGASGLAGRSAVRATGSAALPDTQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42602; Mature: 42602

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: PS00136 SUBTILASE_ASP ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCPAPSCPGAARAAHDARPTLSAGMTLFFAATVGVIVIDLFAAQPLTGPISADLQLPAS
CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LAGLVAMLPQLGYAAGLALLVPLVDLLENRRVIVATLAVCAAMLALPAVTHSGTVFLCAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LIAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLGILLSRPLASLIAGSIGWRAF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALAAAADVAIAAVLALRLPTRTPPVTASYRALLASMGRLLADEPVLRRHALSAALAMAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FSAFWTAIGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDSGRGPLAQRAAFGA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHH
MLAALVVLGIAGAGWLGFDAHAHRGLALALLAGGAALLDAGVIVDQTLGRRAINLLNPAA
HHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCHHH
RGRLNGLFVGLFFVGGAIGAALAGSAWAWGGWSAVCTVALVFAGASGLAGRSAVRATGSA
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
ALPDTQT
CCCCCCC
>Mature Secondary Structure
MNCPAPSCPGAARAAHDARPTLSAGMTLFFAATVGVIVIDLFAAQPLTGPISADLQLPAS
CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LAGLVAMLPQLGYAAGLALLVPLVDLLENRRVIVATLAVCAAMLALPAVTHSGTVFLCAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LIAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLGILLSRPLASLIAGSIGWRAF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALAAAADVAIAAVLALRLPTRTPPVTASYRALLASMGRLLADEPVLRRHALSAALAMAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FSAFWTAIGLRLAQPPFGLDLHGIALFAFAGASGAIVTPLAGRAGDSGRGPLAQRAAFGA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHH
MLAALVVLGIAGAGWLGFDAHAHRGLALALLAGGAALLDAGVIVDQTLGRRAINLLNPAA
HHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCHHH
RGRLNGLFVGLFFVGGAIGAALAGSAWAWGGWSAVCTVALVFAGASGLAGRSAVRATGSA
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
ALPDTQT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]