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The map label for this gene is 161523318

Identifier: 161523318

GI number: 161523318

Start: 153220

End: 153621

Strand: Direct

Name: 161523318

Synonym: Bmul_0138

Alternate gene names: NA

Gene position: 153220-153621 (Clockwise)

Preceding gene: 161523317

Following gene: 161523326

Centisome position: 4.44

GC content: 63.43

Gene sequence:

>402_bases
ATGCCGCGCTACATGCTCGACACCAACATGTGCATCTATCTGATGAAGAACCAGCCGGAGCAGGTCGCGCGGCGTTTCGC
GCAGTGCTACACGGGGGACGTCGTCATGTCGGCGATCACCTATGCGGAACTCGAGTACGGCGTGACGGTATGCGCCAATC
CGGCCCGCGAACGCCGCAATCTCGCCGCGCTGATCGAGGATATCCCGGTTGCGCCGTTCGACGGAGCGGCTGCGCAGGCA
TACGGCCCCATTCGCGAGGCGACGCGGGAACGCAAGAAGGATCATCTCGACAAGCTGATCGGCGCGCACGCGGTATCGCT
CGACGTCGTGCTGGTGACCAACCACGAGCGTGATTTCGCGGGTTATCCGGGCTTGAGGCTCGAGAACTGGCTGACCGGCT
AG

Upstream 100 bases:

>100_bases
GGCCGCTGACCGGCGTGCTCGGCAAGTTCGCGAAATTCGGGCCCGATTTCATGGCCGAGGGGCGCGGCGATCAGGAACAG
GCCGAGCGCAAGGGTGGGTG

Downstream 100 bases:

>100_bases
CACGCGAACACCGCGGCCGGCCGGTTCGAACGGCCGCGAGGGCGGCCGGGGCGCGACGGCCCGCCGATGGAAGGGGGGCA
CGTATCGCGCGGTCGGGGCG

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MPRYMLDTNMCIYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTVCANPARERRNLAALIEDIPVAPFDGAAAQA
YGPIREATRERKKDHLDKLIGAHAVSLDVVLVTNHERDFAGYPGLRLENWLTG

Sequences:

>Translated_133_residues
MPRYMLDTNMCIYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTVCANPARERRNLAALIEDIPVAPFDGAAAQA
YGPIREATRERKKDHLDKLIGAHAVSLDVVLVTNHERDFAGYPGLRLENWLTG
>Mature_132_residues
PRYMLDTNMCIYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTVCANPARERRNLAALIEDIPVAPFDGAAAQAY
GPIREATRERKKDHLDKLIGAHAVSLDVVLVTNHERDFAGYPGLRLENWLTG

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14930; Mature: 14799

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRYMLDTNMCIYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTVCANPARERRN
CCCEEECCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEECCCHHHHHH
LAALIEDIPVAPFDGAAAQAYGPIREATRERKKDHLDKLIGAHAVSLDVVLVTNHERDFA
HHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCC
GYPGLRLENWLTG
CCCCCCCCCCCCC
>Mature Secondary Structure 
PRYMLDTNMCIYLMKNQPEQVARRFAQCYTGDVVMSAITYAELEYGVTVCANPARERRN
CCEEECCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEECCCHHHHHH
LAALIEDIPVAPFDGAAAQAYGPIREATRERKKDHLDKLIGAHAVSLDVVLVTNHERDFA
HHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCC
GYPGLRLENWLTG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]