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The map label for this gene is gspD [H]

Identifier: 161523243

GI number: 161523243

Start: 65433

End: 67760

Strand: Reverse

Name: gspD [H]

Synonym: Bmul_0063

Alternate gene names: 161523243

Gene position: 67760-65433 (Counterclockwise)

Preceding gene: 161523246

Following gene: 161523242

Centisome position: 1.96

GC content: 67.31

Gene sequence:

>2328_bases
ATGACAAGAAATCGCTTCGTTATGCGGCGCGTCGCCACGACGCTGATCATCGCCGGCATCATCGGCTCGCAGGCTGCCTA
CGCTCAGGTCACGCTCAATTTCGTCAATGCGGATATCGACCAGGTCGCGAAGGCGATCGGCGCCGCCACCGGCAAGACCA
TCATCGTCGACCCGCGCGTCAAGGGGCAGCTGAACCTCGTCGCCGAACGCTCGGTGCCCGAAGATCAGGCGCTGAAGACG
CTGCAGTCCGCGCTGCGCATGCAGGGCTTCGCGCTCGTACAGGATCACGGCGTGCTGAAGGTCGTGCCCGAAGCCGACGC
GAAACTGCAGGGCGTGCCGACCTACGTCGGCAACGTGCCGCGCGCACGCGGCGACCAGGTCATCACGCAGGTGTTCGAAC
TGCACAACGAATCGGCGAACAACCTGCTGCCGGTGCTGCGGCCGCTGATCTCGCCGAACAACACCGTCACTGCGTATCCG
GCGAACAACTCGATCGTCGTCACCGACTATGCGGACAACGTGCGCCGCATCGCGCAGATCATCGCCGGCGTCGACAGCGC
CGCGGGCGCGCAGGTGCAGGTCGTGCCGCTGCGCAACGCGAACGCGATCGACCTCGCGTCGCAGCTGCAGAAGATGCTCG
ACCCCGGCGCGATCGGCAACAGCGACGCGACGCTGAAGGTCTCGGTCACGGCCGATCCGCGCACCAACTCGCTGCTGCTG
CGCGCCTCGAATGCGTCGCGGCTCGCGGCCGCGAAGCGCCTCGTGCAGCAGCTCGACGCGCCGAGCGCGGTGCCCGGCAA
CATGCACGTCGTGCCGCTGCGCAACGCCGATGCGGTGAAGCTCGCGAAGACGCTGCGCGGCATGCTCGGCAAGGGCGGCA
ACGACACCGGTTCGTCGGCATCGTCGAACGATGCGAACAGCTTCAACCAGAACGGCTCGTCCTCGAGCGGCAACTTCTCG
ACCGGCACGGCCGGCACGCCGCCGCTGCCGTCCGGCGGGCTCGGCGGCACGTCGTCCTCGTCGTCCTACGGCGGCACGTC
GTCGAGCGGCGGCCTCGGCAATGCGGGGCTGCTCGGCGGCGACAAGGACAAGAACGACGACAACCAGCCGGGCGGGATGA
TCCAGGCCGATGCGGCGACCAACTCGCTGATCATCACGGCGTCCGATCCCGTGTACCGGAACCTGCGCGCGGTGATCGAC
CAGCTCGACAAGCGTCGCGCGCAGGTCTATATCGAGGCGCTGATCGTCGAACTGAACTCGACGACGGCCGGCCAGCTCGG
GATCCAGTGGCAGGTCGCGAGCGGCGCGCTGCTCGCCGGCACGAACCTCGCGGCGACGGCCGGCAGCGTCGCCGGCAACA
GCATCATCAACCTGACGACGGGCTCGGTGAACAGCAGCACGGGCACCGCCACCGGTGTCGGGCTGCCCGCCAATCTCGCG
AACCTGAACCAGGGCCTCAACATCGGCTGGCTGCACAACATGTTCGGCGTGCAGGGCCTCGGCGCGCTGCTGCAGTATTT
CGCGGGCGTCAGCGACGCGAACGTGCTGTCGACGCCGAACCTGATCACGCTCGACAACGAGGAAGCGAAGATCGTCGTCG
GCGAAAACGTGCCGATTCCGACCGGTTCGTATTCGAACCTGACGAGCGGCACCACGAGCAACGCGTTCAACACCTACGAT
CGCCGCGACGTCGGCCTGACGCTGCACGTGAAGCCGCAGATCACCGACGGCGGGATCCTGAAGCTGCAGCTCTACACCGA
GGATTCCGCGGTCGACACCGCGACGACCAACTCGCAGACGGGCCCGTCGTTCACGAAGCGCTCGATCCAGTCGACGATTC
TCGCGGACAACGGCGAAGTGATCGTGCTCGGCGGCCTGATGCAGGACGCGTACAACGTATCCAACAGCAAGGTGCCGCTG
CTCGGCGACATCCCGTGGATCGGCCAGCTGTTCCGCTCGGAAAGCAAGCAGCGCAAGAAGACCAACCTGATGGTGTTCCT
GCGCCCGGTGATCATCGCCGATCGCGATACGGCGCAGGCCGTCACCTCGAACCGCTACGACTACATCCAGGGCGTGACGG
GCGCGTACAAGTCGGACAACAACGTGATCCGCGACAAGGACGACCCCGTCGTGCCGCCGATGCCGCTCGGCCCGAGCCAG
GGCGGCACGGCCGCGGGTAATCTGTTCGATCTCGACAAGATGCGTCGCCAGCAGATGCAGCGCCAGATCGCGCCGCCGGC
CGCCGAGCAGGCGCCCGCGCAGTCGCAGGGCGTGCCGGCGCAGACGGTGCCGCAGCAGCCGCTGACCGCGCCGGGAGCGT
CGCAGTGA

Upstream 100 bases:

>100_bases
GATATTTCGGACATGAAAAACTGCTAATGTCGCCTTTTTCGGATTTGGATCCCAGCACTACCGCCGGAAGTGGCCTGAGC
CGGCATCGCCCCATTCATCC

Downstream 100 bases:

>100_bases
GCGACCTGCTGTCCTCCGCCCACGACGGCGCACCCGGCGAACGGCAGCCGCCCTCGCCGCTCGCCGCGCGGCTGCTGCCG
TACGGCTTCGCGAAGAACGG

Product: general secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 775; Mature: 774

Protein sequence:

>775_residues
MTRNRFVMRRVATTLIIAGIIGSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLVAERSVPEDQALKT
LQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNVPRARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYP
ANNSIVVTDYADNVRRIAQIIAGVDSAAGAQVQVVPLRNANAIDLASQLQKMLDPGAIGNSDATLKVSVTADPRTNSLLL
RASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDTGSSASSNDANSFNQNGSSSSGNFS
TGTAGTPPLPSGGLGGTSSSSSYGGTSSSGGLGNAGLLGGDKDKNDDNQPGGMIQADAATNSLIITASDPVYRNLRAVID
QLDKRRAQVYIEALIVELNSTTAGQLGIQWQVASGALLAGTNLAATAGSVAGNSIINLTTGSVNSSTGTATGVGLPANLA
NLNQGLNIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGENVPIPTGSYSNLTSGTTSNAFNTYD
RRDVGLTLHVKPQITDGGILKLQLYTEDSAVDTATTNSQTGPSFTKRSIQSTILADNGEVIVLGGLMQDAYNVSNSKVPL
LGDIPWIGQLFRSESKQRKKTNLMVFLRPVIIADRDTAQAVTSNRYDYIQGVTGAYKSDNNVIRDKDDPVVPPMPLGPSQ
GGTAAGNLFDLDKMRRQQMQRQIAPPAAEQAPAQSQGVPAQTVPQQPLTAPGASQ

Sequences:

>Translated_775_residues
MTRNRFVMRRVATTLIIAGIIGSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLVAERSVPEDQALKT
LQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNVPRARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYP
ANNSIVVTDYADNVRRIAQIIAGVDSAAGAQVQVVPLRNANAIDLASQLQKMLDPGAIGNSDATLKVSVTADPRTNSLLL
RASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDTGSSASSNDANSFNQNGSSSSGNFS
TGTAGTPPLPSGGLGGTSSSSSYGGTSSSGGLGNAGLLGGDKDKNDDNQPGGMIQADAATNSLIITASDPVYRNLRAVID
QLDKRRAQVYIEALIVELNSTTAGQLGIQWQVASGALLAGTNLAATAGSVAGNSIINLTTGSVNSSTGTATGVGLPANLA
NLNQGLNIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGENVPIPTGSYSNLTSGTTSNAFNTYD
RRDVGLTLHVKPQITDGGILKLQLYTEDSAVDTATTNSQTGPSFTKRSIQSTILADNGEVIVLGGLMQDAYNVSNSKVPL
LGDIPWIGQLFRSESKQRKKTNLMVFLRPVIIADRDTAQAVTSNRYDYIQGVTGAYKSDNNVIRDKDDPVVPPMPLGPSQ
GGTAAGNLFDLDKMRRQQMQRQIAPPAAEQAPAQSQGVPAQTVPQQPLTAPGASQ
>Mature_774_residues
TRNRFVMRRVATTLIIAGIIGSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLVAERSVPEDQALKTL
QSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNVPRARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYPA
NNSIVVTDYADNVRRIAQIIAGVDSAAGAQVQVVPLRNANAIDLASQLQKMLDPGAIGNSDATLKVSVTADPRTNSLLLR
ASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDTGSSASSNDANSFNQNGSSSSGNFST
GTAGTPPLPSGGLGGTSSSSSYGGTSSSGGLGNAGLLGGDKDKNDDNQPGGMIQADAATNSLIITASDPVYRNLRAVIDQ
LDKRRAQVYIEALIVELNSTTAGQLGIQWQVASGALLAGTNLAATAGSVAGNSIINLTTGSVNSSTGTATGVGLPANLAN
LNQGLNIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGENVPIPTGSYSNLTSGTTSNAFNTYDR
RDVGLTLHVKPQITDGGILKLQLYTEDSAVDTATTNSQTGPSFTKRSIQSTILADNGEVIVLGGLMQDAYNVSNSKVPLL
GDIPWIGQLFRSESKQRKKTNLMVFLRPVIIADRDTAQAVTSNRYDYIQGVTGAYKSDNNVIRDKDDPVVPPMPLGPSQG
GTAAGNLFDLDKMRRQQMQRQIAPPAAEQAPAQSQGVPAQTVPQQPLTAPGASQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=684, Percent_Identity=31.8713450292398, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1789793, Length=304, Percent_Identity=26.3157894736842, Blast_Score=93, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 80832; Mature: 80701

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00875 T2SP_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNRFVMRRVATTLIIAGIIGSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRV
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCC
KGQLNLVAERSVPEDQALKTLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNVP
CCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCC
RARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYPANNSIVVTDYADNVRRIAQI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCHHHHHHHHHH
IAGVDSAAGAQVQVVPLRNANAIDLASQLQKMLDPGAIGNSDATLKVSVTADPRTNSLLL
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEE
RASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDTGSSA
EECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
SSNDANSFNQNGSSSSGNFSTGTAGTPPLPSGGLGGTSSSSSYGGTSSSGGLGNAGLLGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DKDKNDDNQPGGMIQADAATNSLIITASDPVYRNLRAVIDQLDKRRAQVYIEALIVELNS
CCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHEEEHEEEEECC
TTAGQLGIQWQVASGALLAGTNLAATAGSVAGNSIINLTTGSVNSSTGTATGVGLPANLA
CCCCCEEEEEEECCCEEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHH
NLNQGLNIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGENVPIP
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCEEEEECCCCCCC
TGSYSNLTSGTTSNAFNTYDRRDVGLTLHVKPQITDGGILKLQLYTEDSAVDTATTNSQT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEECCCCEEEEEEEECCCCCCCCCCCCCC
GPSFTKRSIQSTILADNGEVIVLGGLMQDAYNVSNSKVPLLGDIPWIGQLFRSESKQRKK
CCHHHHHHHHHHEEECCCCEEEEECHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHH
TNLMVFLRPVIIADRDTAQAVTSNRYDYIQGVTGAYKSDNNVIRDKDDPVVPPMPLGPSQ
CCEEEEEEEEEEECCCHHHHHHCCCCHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
GGTAAGNLFDLDKMRRQQMQRQIAPPAAEQAPAQSQGVPAQTVPQQPLTAPGASQ
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRNRFVMRRVATTLIIAGIIGSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRV
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCC
KGQLNLVAERSVPEDQALKTLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNVP
CCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCC
RARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYPANNSIVVTDYADNVRRIAQI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCHHHHHHHHHH
IAGVDSAAGAQVQVVPLRNANAIDLASQLQKMLDPGAIGNSDATLKVSVTADPRTNSLLL
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEE
RASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDTGSSA
EECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
SSNDANSFNQNGSSSSGNFSTGTAGTPPLPSGGLGGTSSSSSYGGTSSSGGLGNAGLLGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DKDKNDDNQPGGMIQADAATNSLIITASDPVYRNLRAVIDQLDKRRAQVYIEALIVELNS
CCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHEEEHEEEEECC
TTAGQLGIQWQVASGALLAGTNLAATAGSVAGNSIINLTTGSVNSSTGTATGVGLPANLA
CCCCCEEEEEEECCCEEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHH
NLNQGLNIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGENVPIP
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCEEEEECCCCCCC
TGSYSNLTSGTTSNAFNTYDRRDVGLTLHVKPQITDGGILKLQLYTEDSAVDTATTNSQT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEECCCCEEEEEEEECCCCCCCCCCCCCC
GPSFTKRSIQSTILADNGEVIVLGGLMQDAYNVSNSKVPLLGDIPWIGQLFRSESKQRKK
CCHHHHHHHHHHEEECCCCEEEEECHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHH
TNLMVFLRPVIIADRDTAQAVTSNRYDYIQGVTGAYKSDNNVIRDKDDPVVPPMPLGPSQ
CCEEEEEEEEEEECCCHHHHHHCCCCHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
GGTAAGNLFDLDKMRRQQMQRQIAPPAAEQAPAQSQGVPAQTVPQQPLTAPGASQ
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]