| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is outE [H]
Identifier: 161523242
GI number: 161523242
Start: 63940
End: 65436
Strand: Reverse
Name: outE [H]
Synonym: Bmul_0062
Alternate gene names: 161523242
Gene position: 65436-63940 (Counterclockwise)
Preceding gene: 161523243
Following gene: 161523241
Centisome position: 1.9
GC content: 68.74
Gene sequence:
>1497_bases GTGAGCGACCTGCTGTCCTCCGCCCACGACGGCGCACCCGGCGAACGGCAGCCGCCCTCGCCGCTCGCCGCGCGGCTGCT GCCGTACGGCTTCGCGAAGAACGGCCAGGTGCTGATCGCGCACCAGCTCGACGACACGCTCGAGGTGTGGATCAGCGATC GCACGAACGACGCCGCGCTGGCCGAGATCGCACGCAATTTCGGCTCGATCGTCGTGCAGCGTGTGCCGGCCGACGAGCTC GCGCAGGCGATCAACCACGCGTATGCGCGGCAGGACGGCAGCGCTGCGCAGATCGTCGGCGAGGTCGAAGGCGAAGTCGA TCTGTCGCGGCTGATGCAGGACATCCCGGAAGTCGAGGATCTGCTCGAATCGGAGGACGACGCGCCGATCATCCGGATGA TCAACGCGCTGCTGACGCAGGCCGCGCGCGAACAGGCGTCGGACATCCATATCGAACCGTTCGAGAATGCATCGGTCGTG CGCTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGGCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGCATCAA GATCATGGCGCAGCTCGACATCGCGGAAAAGCGTCTGCCGCAGGACGGCCGCATCACGCTGCGCGTCGGCGGCCGACCGG TCGACGTGCGCGTGTCGACGCTGCCGACCGGCCACGGCGAACGCGCGGTGCTGCGTCTGCTCGAGAAGGACGCGCAGCGG CTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTCGTGCAGTTCGACAAGCTGATCTCGCGTCCGCACGGCATCGT GCTCGTCACCGGGCCTACGGGCTCCGGGAAGACGACGACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGACCA ATATCATGACCGTCGAGGATCCGATCGAATACGACCTGTCGGGCATCGGCCAGACGCAGGTCAACGAGCGGATCGGGATG ACCTTCGCGCGCGCGCTGCGCTCGATCCTGCGTCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGACCTCGAAAC CGCACAGATCGCGGTGCAGGCCTCGCTCACCGGCCACCTCGTGCTCGCGACGCTGCACACGAACGATGCGGCGTCGGCCG TCACGCGTCTGACCGACATGGGCGTCGAGCCGTATCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGGCTCGTG CGCCAGCTTTGCCCCGTCTGCAAGGAAGAGCGGCACGAGGACGGCCGCAGCGTGTGGCATCCGGTGGGCTGCGACAAGTG CGGGCATTCGGGCTACACGGGCCGGCGCGGCGTGTACGAGCTGCTGATCGTCGACGATGCGATCCGCACGCTGATTCACC GCAACGCGGCCGACGCGGAGATTCTCGCGGCCGGCCGCGCGCAGGGCATGCGCACGCTGCGCGACGACGCGGAGCGCTGG CTCGCGGCCGGTGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG
Upstream 100 bases:
>100_bases AGATCGCGCCGCCGGCCGCCGAGCAGGCGCCCGCGCAGTCGCAGGGCGTGCCGGCGCAGACGGTGCCGCAGCAGCCGCTG ACCGCGCCGGGAGCGTCGCA
Downstream 100 bases:
>100_bases CGCGATGCCCGCATTCCGTTTCGAAGCGATCGATGCGGCCGGCCGTACGCAGAAGGGCGTGGTCGATGCCGACAGCGCGC GCGCCGCACGCGGGCAGCTG
Product: general secretory pathway protein E
Products: NA
Alternate protein names: Pectic enzymes secretion protein outE; Type II traffic warden ATPase [H]
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MSDLLSSAHDGAPGERQPPSPLAARLLPYGFAKNGQVLIAHQLDDTLEVWISDRTNDAALAEIARNFGSIVVQRVPADEL AQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVV RFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQR LNLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGM TFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLV RQLCPVCKEERHEDGRSVWHPVGCDKCGHSGYTGRRGVYELLIVDDAIRTLIHRNAADAEILAAGRAQGMRTLRDDAERW LAAGATSLEEVLRVTGGA
Sequences:
>Translated_498_residues MSDLLSSAHDGAPGERQPPSPLAARLLPYGFAKNGQVLIAHQLDDTLEVWISDRTNDAALAEIARNFGSIVVQRVPADEL AQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVV RFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQR LNLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGM TFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLV RQLCPVCKEERHEDGRSVWHPVGCDKCGHSGYTGRRGVYELLIVDDAIRTLIHRNAADAEILAAGRAQGMRTLRDDAERW LAAGATSLEEVLRVTGGA >Mature_497_residues SDLLSSAHDGAPGERQPPSPLAARLLPYGFAKNGQVLIAHQLDDTLEVWISDRTNDAALAEIARNFGSIVVQRVPADELA QAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVR FRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRL NLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGMT FARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVR QLCPVCKEERHEDGRSVWHPVGCDKCGHSGYTGRRGVYELLIVDDAIRTLIHRNAADAEILAAGRAQGMRTLRDDAERWL AAGATSLEEVLRVTGGA
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of pectate lyases and cellulases across the outer membrane [H]
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP E family [H]
Homologues:
Organism=Escherichia coli, GI1789723, Length=420, Percent_Identity=54.2857142857143, Blast_Score=450, Evalue=1e-128, Organism=Escherichia coli, GI1786296, Length=439, Percent_Identity=42.369020501139, Blast_Score=331, Evalue=7e-92, Organism=Escherichia coli, GI87082188, Length=282, Percent_Identity=36.8794326241135, Blast_Score=123, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013369 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E [H]
EC number: NA
Molecular weight: Translated: 54199; Mature: 54067
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00662 T2SP_E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLLSSAHDGAPGERQPPSPLAARLLPYGFAKNGQVLIAHQLDDTLEVWISDRTNDAAL CCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHH AEIARNFGSIVVQRVPADELAQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVED HHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCHHHEEHHCCCCHHHHHHHHHCHHHHH LLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVRFRVDGTLRDVVRPKKALHG HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH ALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQR HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHH LNLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVED CCHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCEEEECC PIEYDLSGIGQTQVNERIGMTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHL CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEECCCEE VLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVRQLCPVCKEERHEDGRSVWH EEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PVGCDKCGHSGYTGRRGVYELLIVDDAIRTLIHRNAADAEILAAGRAQGMRTLRDDAERW CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LAAGATSLEEVLRVTGGA HHHCHHHHHHHHHHCCCC >Mature Secondary Structure SDLLSSAHDGAPGERQPPSPLAARLLPYGFAKNGQVLIAHQLDDTLEVWISDRTNDAAL CHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHH AEIARNFGSIVVQRVPADELAQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVED HHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCHHHEEHHCCCCHHHHHHHHHCHHHHH LLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVRFRVDGTLRDVVRPKKALHG HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH ALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQR HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHH LNLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVED CCHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCEEEECC PIEYDLSGIGQTQVNERIGMTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHL CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEECCCEE VLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVRQLCPVCKEERHEDGRSVWH EEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PVGCDKCGHSGYTGRRGVYELLIVDDAIRTLIHRNAADAEILAAGRAQGMRTLRDDAERW CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LAAGATSLEEVLRVTGGA HHHCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1429461 [H]