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The map label for this gene is recO [H]

Identifier: 161501890

GI number: 161501890

Start: 526096

End: 526821

Strand: Reverse

Name: recO [H]

Synonym: TW487

Alternate gene names: 161501890

Gene position: 526821-526096 (Counterclockwise)

Preceding gene: 28572637

Following gene: 28572635

Centisome position: 56.9

GC content: 46.56

Gene sequence:

>726_bases
GTGAGCGGGCATTATCGTGACAGAGCTATTGTTCTTAGAACAAAACCACTGGGTGAAGCAGACAGGATCATTACCCTCTT
TACACGGTCCAATGGAACATCGGATTTTGTTGCCAAGGGAATTAGGCGTCCTAAGTCTCGCTTTGGCTCTTCGCTTGAAC
CTTTTACCGTAATCGATGCTTTTTTGTACATCGGTCGTGGTATGGACGGTGTAAGTCAGGCAGAAATTCTGGCATCATAT
GGGTCGAGGCTTGTGAAAAGTACGGAATCTTATATTGCTGCAAATGTTATTGCAGAGACTGGGAGACGTCTCGGTATTGC
CGGTGGGTCGGTTCAGCAGTTTGATCTTTTACACGGTGCCTTTTCAGCACTTTCGAGAGGAATTAGCTCGCCTGAGGCTA
TCTGCAGTTCATACCTTCTGCGTTCTATGTCTGCAGCGGGATGGCGGCCTGCGCTTGAAAATTGCGCCAAATGCCTTTTA
CCTCTCGTAGAGTACACAATAGATATTTCTGCAGGTGGTCTTGTTTGCACTTCTTGTTCAGAACATCCGGTGGTAAACAA
TAAGTTATGCGAGTATCTTTTGGCCTTGAGGGAGGGCGATTGGCCCTATATAAACGAGTCCGATGAGTCGCTTCGCGGAC
AGGCAAGAAACTTTGTCTTTGAGTATACGCAGTGGCATATTGATCATCCATTGAAAAGCCTAAAAATTGTTGCGAAGTCC
TGGTGA

Upstream 100 bases:

>100_bases
CTACGTCTTATTGTGAAGGTTGTGAAGAACTGGCAAAAAAGTGAGTCATTTCTTGGCAAGATTTACCTTTCCTGAATGGT
ACGTGTGTAAGAATTGGGAT

Downstream 100 bases:

>100_bases
GGATATGCTGGCAGGAAATGTGTAATCGTGGAGATATTTTCAGTCGACTGGACGGGTCAAACTCCGCCGCATATCCCGAG
GAAATCTTTGCCAAGACATG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSGHYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDAFLYIGRGMDGVSQAEILASY
GSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGAFSALSRGISSPEAICSSYLLRSMSAAGWRPALENCAKCLL
PLVEYTIDISAGGLVCTSCSEHPVVNNKLCEYLLALREGDWPYINESDESLRGQARNFVFEYTQWHIDHPLKSLKIVAKS
W

Sequences:

>Translated_241_residues
MSGHYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDAFLYIGRGMDGVSQAEILASY
GSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGAFSALSRGISSPEAICSSYLLRSMSAAGWRPALENCAKCLL
PLVEYTIDISAGGLVCTSCSEHPVVNNKLCEYLLALREGDWPYINESDESLRGQARNFVFEYTQWHIDHPLKSLKIVAKS
W
>Mature_240_residues
SGHYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDAFLYIGRGMDGVSQAEILASYG
SRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGAFSALSRGISSPEAICSSYLLRSMSAAGWRPALENCAKCLLP
LVEYTIDISAGGLVCTSCSEHPVVNNKLCEYLLALREGDWPYINESDESLRGQARNFVFEYTQWHIDHPLKSLKIVAKSW

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26529; Mature: 26397

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDA
CCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHCCCCCCHHHHHHH
FLYIGRGMDGVSQAEILASYGSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
FSALSRGISSPEAICSSYLLRSMSAAGWRPALENCAKCLLPLVEYTIDISAGGLVCTSCS
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
EHPVVNNKLCEYLLALREGDWPYINESDESLRGQARNFVFEYTQWHIDHPLKSLKIVAKS
CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
W
C
>Mature Secondary Structure 
SGHYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAKGIRRPKSRFGSSLEPFTVIDA
CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHCCCCCCHHHHHHH
FLYIGRGMDGVSQAEILASYGSRLVKSTESYIAANVIAETGRRLGIAGGSVQQFDLLHGA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
FSALSRGISSPEAICSSYLLRSMSAAGWRPALENCAKCLLPLVEYTIDISAGGLVCTSCS
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
EHPVVNNKLCEYLLALREGDWPYINESDESLRGQARNFVFEYTQWHIDHPLKSLKIVAKS
CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA