| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is rhlB [H]
Identifier: 161486737
GI number: 161486737
Start: 1212230
End: 1213681
Strand: Reverse
Name: rhlB [H]
Synonym: Psyr_1070
Alternate gene names: 161486737
Gene position: 1213681-1212230 (Counterclockwise)
Preceding gene: 66044324
Following gene: 66044317
Centisome position: 19.92
GC content: 61.36
Gene sequence:
>1452_bases GTGCTCAAAGCACTTAAAAAGATGTTCGGTAAGAGCGAGGCTGAGCAGCCTGCGCCTACTCCGATAACCTCTATTCCCGC CTCTCCCGCTGCCACAGGCGACACACCGGATCATGCTGTCCAGACTCAGGCTCTGGACACGACCAGCGAGCCCTCCAAAG CCAGAGCGCCGCGCACCGACAAGCCAAGGGCCGAGCGCCCGCGCCGCGAACGCGTAGCCAAACCGCCCGTCCCGGAATGG AAACTCGAGGATTTCGTCGTCGAACCCCAGGAAGGCAAGACCCGCTTCCATGACTTCAACCTCGCGCCTGAACTGATGCA CGCGATTCAGGACCTGGGCTTCCCGTACTGCACACCGATCCAGGCGGGCGTACTGGGCTTCACCCTCAAGGGCAAGGATG CGATCGGACGCGCCCAGACCGGCACCGGCAAGACCGCGGCGTTTCTGATCTCGATCATCGAGCAACTGACCCAGACGCCG CCGCCTGCAGAACGCTACATGGGTGAGCCGCGCGCGCTGATCATCGCTCCGACCCGCGAGCTGGTGGTACAGATCGCCAA AGACGCCGCCGACCTGACCAAGTACACCAACCTGAACGTCATGACCTTCGTCGGTGGCATGGACTTCGACAAGCAGCTCA AACAACTCGAAGCGCGCCACTGCGACATCCTGGTCGCCACGCCAGGCCGCCTGCTGGACTTCAACCAGCGCGGCGAAGTG CATCTGGATATGGTCGAAGTGATGGTCCTCGACGAAGCCGATCGCATGCTGGACATGGGCTTTATCCCGCAGGTACGCCA GATCATTCGTCAGACGCCGCACAAGGGTGAGCGCCAGACCCTGCTGTTCTCCGCGACTTTCACCGAAGACGTAATGAACC TCGCCAAACAGTGGACGACGGACCCTTCCATTGTCGAGATCGAATCGTTGAATGTTGCCAGCGACAACGTCGAACAGCAT ATCTATGCCGTCGCCGGTGCCGACAAGTACAAGCTGCTCTACAACCTGGTGACCGACAACGGTTGGGAACGGGTCATGGT CTTCGCCAACCGCAAGGACGAAGTCCGACGCATCGAAGAGCGCCTGGTGCGCGATGGCGTGAACGCGGCGCAGCTGTCAG GCGATGTGCCTCAGCACAAGCGCATCAAAACCCTTGAAGGCTTCCGCGAAGGCAAGATCCGCGTGCTGGTCGCCACCGAT GTGGCCGGTCGCGGCATTCACATCGACGGCATCAGTCACGTGATCAACTTCACCCTGCCCGAAGTGCCGGACGATTACGT GCACCGCATCGGCCGTACCGGTCGCGCCGGCGCCGATGGCGTGTCGATCAGCTTTGCCGGTGAGGATGACTCTTACCAGT TGCCCGCCATCGAGGAAAAACTGGGCCGCAAGATCAGTTGCGAGACACCGCCGACTCATCTGCTCAGGGCTGTGGTGCGC AGCAACGCCTGA
Upstream 100 bases:
>100_bases CGGACCGCTTTTGTAGCTCGCCATGGATGGCACTACGCCGAGCACGGTTCTTGCTTTACACTGCTCGGCGTACATTCCTT AACCAATTGATGAGATGACC
Downstream 100 bases:
>100_bases TGCTTACTTCCAGCGATCAGCCGCCTGGTGATCGCTGTGACGACCTTCGACCCAGCGCGTGCCTTCTGACGTGTTTTCAC GCTTCCAGAACGGCGCGCGG
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MLKALKKMFGKSEAEQPAPTPITSIPASPAATGDTPDHAVQTQALDTTSEPSKARAPRTDKPRAERPRRERVAKPPVPEW KLEDFVVEPQEGKTRFHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQLTQTP PPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTNLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQRGEV HLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTEDVMNLAKQWTTDPSIVEIESLNVASDNVEQH IYAVAGADKYKLLYNLVTDNGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATD VAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPAIEEKLGRKISCETPPTHLLRAVVR SNA
Sequences:
>Translated_483_residues MLKALKKMFGKSEAEQPAPTPITSIPASPAATGDTPDHAVQTQALDTTSEPSKARAPRTDKPRAERPRRERVAKPPVPEW KLEDFVVEPQEGKTRFHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQLTQTP PPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTNLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQRGEV HLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTEDVMNLAKQWTTDPSIVEIESLNVASDNVEQH IYAVAGADKYKLLYNLVTDNGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATD VAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPAIEEKLGRKISCETPPTHLLRAVVR SNA >Mature_483_residues MLKALKKMFGKSEAEQPAPTPITSIPASPAATGDTPDHAVQTQALDTTSEPSKARAPRTDKPRAERPRRERVAKPPVPEW KLEDFVVEPQEGKTRFHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQLTQTP PPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTNLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQRGEV HLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTEDVMNLAKQWTTDPSIVEIESLNVASDNVEQH IYAVAGADKYKLLYNLVTDNGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATD VAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPAIEEKLGRKISCETPPTHLLRAVVR SNA
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=39.7183098591549, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI301171467, Length=367, Percent_Identity=39.2370572207085, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=39.7183098591549, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=39.2370572207085, Blast_Score=248, Evalue=9e-66, Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=39.2370572207085, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=39.7183098591549, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=39.7183098591549, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=39.344262295082, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=38.4823848238482, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=38.4823848238482, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI222352149, Length=394, Percent_Identity=36.2944162436548, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=37.8531073446328, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=37.8531073446328, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI41327771, Length=413, Percent_Identity=34.6246973365617, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI50659095, Length=395, Percent_Identity=37.2151898734177, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI21071032, Length=365, Percent_Identity=37.5342465753425, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI4758138, Length=354, Percent_Identity=36.7231638418079, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI45446747, Length=364, Percent_Identity=38.1868131868132, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI45446743, Length=364, Percent_Identity=38.1868131868132, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI13129006, Length=397, Percent_Identity=36.0201511335013, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI55749865, Length=389, Percent_Identity=32.9048843187661, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI7661920, Length=372, Percent_Identity=32.7956989247312, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI20149629, Length=382, Percent_Identity=34.2931937172775, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI188035877, Length=358, Percent_Identity=34.9162011173184, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI164664518, Length=398, Percent_Identity=31.1557788944724, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=34.3575418994413, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI4758112, Length=375, Percent_Identity=29.8666666666667, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI18375623, Length=375, Percent_Identity=29.8666666666667, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI13514831, Length=356, Percent_Identity=34.5505617977528, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI21040371, Length=370, Percent_Identity=30, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=32.4538258575198, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=31.5649867374005, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=31.5649867374005, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI41327779, Length=379, Percent_Identity=33.509234828496, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38569503, Length=382, Percent_Identity=34.0314136125654, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38569505, Length=362, Percent_Identity=35.0828729281768, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI83700235, Length=365, Percent_Identity=34.7945205479452, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=32.8981723237598, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=32.6370757180157, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI4503529, Length=365, Percent_Identity=33.4246575342466, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI41327776, Length=382, Percent_Identity=32.1989528795811, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI62241022, Length=367, Percent_Identity=33.2425068119891, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI62241024, Length=345, Percent_Identity=33.6231884057971, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI38327634, Length=351, Percent_Identity=33.6182336182336, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI164419732, Length=376, Percent_Identity=30.5851063829787, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI256773275, Length=380, Percent_Identity=29.7368421052632, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=27.6119402985075, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI17505907, Length=401, Percent_Identity=28.1795511221945, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI256223453, Length=372, Percent_Identity=26.8817204301075, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI154759257, Length=447, Percent_Identity=27.5167785234899, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=29.9065420560748, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI4826686, Length=350, Percent_Identity=30.5714285714286, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI20336298, Length=232, Percent_Identity=34.051724137931, Blast_Score=111, Evalue=1e-24, Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=44.743935309973, Blast_Score=318, Evalue=7e-88, Organism=Escherichia coli, GI1787016, Length=370, Percent_Identity=42.7027027027027, Blast_Score=306, Evalue=2e-84, Organism=Escherichia coli, GI87082221, Length=387, Percent_Identity=37.7260981912145, Blast_Score=248, Evalue=5e-67, Organism=Escherichia coli, GI1787605, Length=383, Percent_Identity=39.4255874673629, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1788930, Length=360, Percent_Identity=38.8888888888889, Blast_Score=221, Evalue=8e-59, Organism=Caenorhabditis elegans, GI17510307, Length=362, Percent_Identity=38.6740331491713, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17510309, Length=362, Percent_Identity=38.6740331491713, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=38.6740331491713, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI32565321, Length=406, Percent_Identity=33.0049261083744, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI17510559, Length=410, Percent_Identity=34.6341463414634, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI71987143, Length=382, Percent_Identity=33.7696335078534, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=36.8131868131868, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=36.0215053763441, Blast_Score=211, Evalue=8e-55, Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=37.1830985915493, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17509811, Length=403, Percent_Identity=33.7468982630273, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17552642, Length=358, Percent_Identity=36.3128491620112, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI86570094, Length=369, Percent_Identity=35.230352303523, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=32.5268817204301, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=32.3450134770889, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71982858, Length=376, Percent_Identity=31.3829787234043, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507121, Length=372, Percent_Identity=32.5268817204301, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI115532548, Length=399, Percent_Identity=33.5839598997494, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI115532546, Length=383, Percent_Identity=34.2036553524804, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17507881, Length=379, Percent_Identity=33.509234828496, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=34.7480106100796, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17507945, Length=339, Percent_Identity=38.3480825958702, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71999646, Length=373, Percent_Identity=32.7077747989276, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17537549, Length=362, Percent_Identity=33.7016574585635, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71999644, Length=373, Percent_Identity=32.7077747989276, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI71990816, Length=385, Percent_Identity=33.7662337662338, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17507879, Length=375, Percent_Identity=34.4, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17507641, Length=384, Percent_Identity=33.8541666666667, Blast_Score=177, Evalue=8e-45, Organism=Caenorhabditis elegans, GI17505370, Length=340, Percent_Identity=35.2941176470588, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI32564046, Length=369, Percent_Identity=33.6043360433604, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI25148203, Length=465, Percent_Identity=28.1720430107527, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI193208216, Length=378, Percent_Identity=31.2169312169312, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17508543, Length=385, Percent_Identity=27.5324675324675, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17536099, Length=398, Percent_Identity=28.643216080402, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=26.8571428571429, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17536101, Length=393, Percent_Identity=28.7531806615776, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17536103, Length=387, Percent_Identity=28.9405684754522, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17556951, Length=363, Percent_Identity=30.0275482093664, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17553716, Length=375, Percent_Identity=26.6666666666667, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=34.6153846153846, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25148291, Length=351, Percent_Identity=27.3504273504274, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71997889, Length=368, Percent_Identity=27.1739130434783, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25148205, Length=346, Percent_Identity=26.0115606936416, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71987152, Length=87, Percent_Identity=47.1264367816092, Blast_Score=86, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6324778, Length=368, Percent_Identity=38.8586956521739, Blast_Score=247, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=37.874659400545, Blast_Score=239, Evalue=6e-64, Organism=Saccharomyces cerevisiae, GI6324217, Length=364, Percent_Identity=38.4615384615385, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=346, Percent_Identity=39.5953757225434, Blast_Score=223, Evalue=7e-59, Organism=Saccharomyces cerevisiae, GI6320224, Length=374, Percent_Identity=32.3529411764706, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6321856, Length=382, Percent_Identity=36.3874345549738, Blast_Score=219, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6320449, Length=402, Percent_Identity=35.3233830845771, Blast_Score=213, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6323021, Length=381, Percent_Identity=34.3832020997375, Blast_Score=211, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6320041, Length=373, Percent_Identity=33.2439678284182, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=34.6368715083799, Blast_Score=189, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=427, Percent_Identity=31.1475409836066, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=379, Percent_Identity=30.6068601583113, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6320173, Length=430, Percent_Identity=30.9302325581395, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=33.1476323119777, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6321963, Length=390, Percent_Identity=32.8205128205128, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322912, Length=372, Percent_Identity=31.1827956989247, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322323, Length=372, Percent_Identity=31.1827956989247, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=383, Percent_Identity=29.242819843342, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=27.8450363196126, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6319618, Length=410, Percent_Identity=28.5365853658537, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=29.9727520435967, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=391, Percent_Identity=29.6675191815857, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=391, Percent_Identity=28.6445012787724, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=395, Percent_Identity=28.3544303797468, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6324366, Length=351, Percent_Identity=25.9259259259259, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6321374, Length=384, Percent_Identity=25.78125, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI21356161, Length=368, Percent_Identity=39.1304347826087, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI17985987, Length=374, Percent_Identity=38.2352941176471, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=37.1428571428571, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI28574962, Length=363, Percent_Identity=38.2920110192837, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644479, Length=375, Percent_Identity=36.5333333333333, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI21355075, Length=460, Percent_Identity=32.6086956521739, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI281361218, Length=385, Percent_Identity=36.3636363636364, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24644481, Length=385, Percent_Identity=36.3636363636364, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24644483, Length=385, Percent_Identity=36.3636363636364, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644487, Length=385, Percent_Identity=36.3636363636364, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI45551833, Length=385, Percent_Identity=36.3636363636364, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644485, Length=385, Percent_Identity=36.3636363636364, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24584994, Length=406, Percent_Identity=34.7290640394089, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI18857967, Length=396, Percent_Identity=35.3535353535354, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24662330, Length=363, Percent_Identity=37.1900826446281, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=33.8709677419355, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI24642151, Length=345, Percent_Identity=36.5217391304348, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI24585582, Length=384, Percent_Identity=33.8541666666667, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=36.1111111111111, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI28575014, Length=372, Percent_Identity=33.6021505376344, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI24583281, Length=371, Percent_Identity=31.266846361186, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24583279, Length=371, Percent_Identity=31.266846361186, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24666101, Length=387, Percent_Identity=35.6589147286822, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=37.4603174603175, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24582080, Length=366, Percent_Identity=33.0601092896175, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24582078, Length=366, Percent_Identity=33.0601092896175, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI17136248, Length=366, Percent_Identity=33.0601092896175, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24582075, Length=366, Percent_Identity=33.0601092896175, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581954, Length=375, Percent_Identity=30.4, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581952, Length=375, Percent_Identity=30.4, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581956, Length=375, Percent_Identity=30.4, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI17136814, Length=385, Percent_Identity=32.987012987013, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI24642822, Length=447, Percent_Identity=29.7539149888143, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI20130173, Length=450, Percent_Identity=30.6666666666667, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI28571808, Length=344, Percent_Identity=33.4302325581395, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI28571809, Length=344, Percent_Identity=33.4302325581395, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI19920478, Length=348, Percent_Identity=32.183908045977, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=32.010582010582, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI17647335, Length=388, Percent_Identity=26.8041237113402, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=28.5359801488834, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI17136666, Length=424, Percent_Identity=25, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24640164, Length=341, Percent_Identity=26.3929618768328, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24668515, Length=336, Percent_Identity=27.0833333333333, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI18859659, Length=225, Percent_Identity=30.6666666666667, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI28571338, Length=225, Percent_Identity=30.6666666666667, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 53616; Mature: 53616
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKALKKMFGKSEAEQPAPTPITSIPASPAATGDTPDHAVQTQALDTTSEPSKARAPRTD CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC KPRAERPRRERVAKPPVPEWKLEDFVVEPQEGKTRFHDFNLAPELMHAIQDLGFPYCTPI CCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCH QAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQLTQTPPPAERYMGEPRALIIAPTRE HHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECHHH LVVQIAKDAADLTKYTNLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQRGEV HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCEECCCCCCCE HLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTEDVMNLAKQWTT EEEEEEHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHCCC DPSIVEIESLNVASDNVEQHIYAVAGADKYKLLYNLVTDNGWERVMVFANRKDEVRRIEE CCCEEEEEECCCCCCCHHHHEEEEECCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHH RLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLP HHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCHHHHHHCCCC EVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPAIEEKLGRKISCETPPTHLLRAVVR CCCHHHHHHCCCCCCCCCCCEEEEECCCCCCEECCHHHHHHCCEEECCCCHHHHHHHHHH SNA CCC >Mature Secondary Structure MLKALKKMFGKSEAEQPAPTPITSIPASPAATGDTPDHAVQTQALDTTSEPSKARAPRTD CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC KPRAERPRRERVAKPPVPEWKLEDFVVEPQEGKTRFHDFNLAPELMHAIQDLGFPYCTPI CCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCH QAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQLTQTPPPAERYMGEPRALIIAPTRE HHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECHHH LVVQIAKDAADLTKYTNLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQRGEV HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCEECCCCCCCE HLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTEDVMNLAKQWTT EEEEEEHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHCCC DPSIVEIESLNVASDNVEQHIYAVAGADKYKLLYNLVTDNGWERVMVFANRKDEVRRIEE CCCEEEEEECCCCCCCHHHHEEEEECCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHH RLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLP HHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCHHHHHHCCCC EVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPAIEEKLGRKISCETPPTHLLRAVVR CCCHHHHHHCCCCCCCCCCCEEEEECCCCCCEECCHHHHHHCCEEECCCCHHHHHHHHHH SNA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]