| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is yheU [C]
Identifier: 161486728
GI number: 161486728
Start: 4469329
End: 4469556
Strand: Direct
Name: yheU [C]
Synonym: Psyr_3750
Alternate gene names: 161486728
Gene position: 4469329-4469556 (Clockwise)
Preceding gene: 66046977
Following gene: 66046983
Centisome position: 73.34
GC content: 57.02
Gene sequence:
>228_bases ATGCTGATCCCCTACGACCAACTGGAACCTGACACCCTCACTCGCCTGATCGAGGATTTCGTCACCCGTGAGGGCACCGA TAATGGCGACGAAACACCGCTGCAAACCCGGGTACTGCGCGTGCGTCATGCGTTGACCAAGGGCCAGGCGGTGATCTTTT TCGACCTTGAGAGCCAGCAGTGTCAGCTGATGCTCAAGCACGACGTGCCGAAGGAGTTTTTCGAATAG
Upstream 100 bases:
>100_bases AGCCTGATCGGGCAGAATCGCGAAGAGAGCTGAGGCCCTGTGAATTGCGGTGCGTGGCACCGCAGTTCTATTATCGCCGC TCATCGACACGAGAACCGCC
Downstream 100 bases:
>100_bases CCTCTAAAGGCCGAGTCAGGTCATTTGCCCACAACGTCGCCTGCTGACCACGCCGCTCACCGAAGCGGCGTTGTTGCCTG TTGCGCAAGCGTCCTGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MLIPYDQLEPDTLTRLIEDFVTREGTDNGDETPLQTRVLRVRHALTKGQAVIFFDLESQQCQLMLKHDVPKEFFE
Sequences:
>Translated_75_residues MLIPYDQLEPDTLTRLIEDFVTREGTDNGDETPLQTRVLRVRHALTKGQAVIFFDLESQQCQLMLKHDVPKEFFE >Mature_75_residues MLIPYDQLEPDTLTRLIEDFVTREGTDNGDETPLQTRVLRVRHALTKGQAVIFFDLESQQCQLMLKHDVPKEFFE
Specific function: Unknown
COG id: COG3089
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0270 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1506_PSE14 (Q48LG4)
Other databases:
- EMBL: CP000058 - RefSeq: YP_273760.1 - HSSP: Q9HYE3 - ProteinModelPortal: Q48LG4 - SMR: Q48LG4 - STRING: Q48LG4 - GeneID: 3556264 - GenomeReviews: CP000058_GR - KEGG: psp:PSPPH_1506 - eggNOG: COG3089 - HOGENOM: HBG678569 - OMA: QCQLMLK - ProtClustDB: PRK00304 - HAMAP: MF_00690 - InterPro: IPR010648 - Gene3D: G3DSA:1.10.10.610 - PIRSF: PIRSF006169 - ProDom: PD026997
Pfam domain/function: PF06794 UPF0270
EC number: NA
Molecular weight: Translated: 8778; Mature: 8778
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPYDQLEPDTLTRLIEDFVTREGTDNGDETPLQTRVLRVRHALTKGQAVIFFDLESQQ CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHH CQLMLKHDVPKEFFE HHHHHHCCCCHHHCC >Mature Secondary Structure MLIPYDQLEPDTLTRLIEDFVTREGTDNGDETPLQTRVLRVRHALTKGQAVIFFDLESQQ CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHH CQLMLKHDVPKEFFE HHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA