| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is yqiA [H]
Identifier: 161486662
GI number: 161486662
Start: 570111
End: 570701
Strand: Direct
Name: yqiA [H]
Synonym: VV0587
Alternate gene names: 161486662
Gene position: 570111-570701 (Clockwise)
Preceding gene: 37678770
Following gene: 37678772
Centisome position: 17.0
GC content: 48.56
Gene sequence:
>591_bases ATGAGCCATCCTAAGCCTTCACTGCTGCTCTACATTCATGGTTTTAACAGCTCGCCGTTATCGATGAAAGCCAATCTGAT GCGTGAATATTGCCAGCAACACCGACCCGACATCAAGGTTGTGGTGCCGCAGTTACCGAGTTTTCCGCAAGCGGCTGCGG AGTGTTTGCTAGAGATTGTTCAGCAACATAAAGCCACTCATCGTATTGGTTTGGTGGGGAGTTCGCTCGGTGGTTATTTG TCGACTTGGCTCAATGCCGAGTTTGGTTTTCGCGCCGTGGTTGTCAATCCGGCGGTGAAGCCATATGAGCTGCTGGCTGA CTATCTAGGGCCACAAACTAACTCATATACGCATGAAAGCTATACACTCGAAGCGCGTCATATTGACGAATTGAAAGCGC TTGAGGTAAAAGAGGTCGCGAATCCAGAATCTTTCTGGCTATTGCAGCAAACCGAAGATGAAGTGCTGGACTACCGTCAG GCAGTGGAAAAGTACGCAGGTTCTGCACAAACGGTAGAAGAGGGAGGCGATCATAGTTTTGTTGGCTTTGAACGCTATCC AGAGCGAATCATTCACTTTCTTGGTTTGTAA
Upstream 100 bases:
>100_bases CGCGAATTAACACTGCATGCCAATGGTGAGATCACCACTCAAGTGCAACGCCTAGCTTCGGGCAGTTTTTTACCTGATTT TACCTCAAGTGGTTACTGAT
Downstream 100 bases:
>100_bases CGCTACCACTCAGAGACAGGATTAGGAGGGGCTCATAATTTTACCTCTGATATCCAACCGTTTCTTGACATAGTCGCACT GCTTTCCGACTATGTTTCTC
Product: esterase YqiA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSHPKPSLLLYIHGFNSSPLSMKANLMREYCQQHRPDIKVVVPQLPSFPQAAAECLLEIVQQHKATHRIGLVGSSLGGYL STWLNAEFGFRAVVVNPAVKPYELLADYLGPQTNSYTHESYTLEARHIDELKALEVKEVANPESFWLLQQTEDEVLDYRQ AVEKYAGSAQTVEEGGDHSFVGFERYPERIIHFLGL
Sequences:
>Translated_196_residues MSHPKPSLLLYIHGFNSSPLSMKANLMREYCQQHRPDIKVVVPQLPSFPQAAAECLLEIVQQHKATHRIGLVGSSLGGYL STWLNAEFGFRAVVVNPAVKPYELLADYLGPQTNSYTHESYTLEARHIDELKALEVKEVANPESFWLLQQTEDEVLDYRQ AVEKYAGSAQTVEEGGDHSFVGFERYPERIIHFLGL >Mature_195_residues SHPKPSLLLYIHGFNSSPLSMKANLMREYCQQHRPDIKVVVPQLPSFPQAAAECLLEIVQQHKATHRIGLVGSSLGGYLS TWLNAEFGFRAVVVNPAVKPYELLADYLGPQTNSYTHESYTLEARHIDELKALEVKEVANPESFWLLQQTEDEVLDYRQA VEKYAGSAQTVEEGGDHSFVGFERYPERIIHFLGL
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=190, Percent_Identity=55.7894736842105, Blast_Score=218, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 22142; Mature: 22011
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPKPSLLLYIHGFNSSPLSMKANLMREYCQQHRPDIKVVVPQLPSFPQAAAECLLEIV CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHH QQHKATHRIGLVGSSLGGYLSTWLNAEFGFRAVVVNPAVKPYELLADYLGPQTNSYTHES HHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCE YTLEARHIDELKALEVKEVANPESFWLLQQTEDEVLDYRQAVEKYAGSAQTVEEGGDHSF EEEEHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC VGFERYPERIIHFLGL CCHHHHHHHHHHHHCC >Mature Secondary Structure SHPKPSLLLYIHGFNSSPLSMKANLMREYCQQHRPDIKVVVPQLPSFPQAAAECLLEIV CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHH QQHKATHRIGLVGSSLGGYLSTWLNAEFGFRAVVVNPAVKPYELLADYLGPQTNSYTHES HHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCE YTLEARHIDELKALEVKEVANPESFWLLQQTEDEVLDYRQAVEKYAGSAQTVEEGGDHSF EEEEHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC VGFERYPERIIHFLGL CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]