| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yajF
Identifier: 161486537
GI number: 161486537
Start: 338894
End: 339787
Strand: Direct
Name: yajF
Synonym: S0338
Alternate gene names: 161486537
Gene position: 338894-339787 (Clockwise)
Preceding gene: 30061889
Following gene: 30061895
Centisome position: 7.37
GC content: 55.7
Gene sequence:
>894_bases GTGCGTATAGGTATCGATTTAGGCGGCACCAAAACTGAAGTGATTGCACTGGGCGATGCAGGGGAGCAGTTGTACCGCCA TCGTCTGCCCACGCCGCGTGATGATTACCGGCAGACTATTGAAACGATCGCCACGTTGGTTGATATGGCGGAGCAGGCGA CAGGGCAGCGCGGAACGGTAGGTATGGGCATTCCAGGTTCGATTTCGCCCTACACCGGTGTGGTGAAGAATGTCAATTCA ACCTGGCTCAACGGTCAGCCATTCGATAAAGACTTAAGCGCGAGGTTGCAGCGGGAAGTGCGGCTGGCAAATGATGCCAA CTGTCTGGCGGTTTCAGAAGCAGTAGATGGCGCGGCAGCGGGAGCGCAGACGGTATTTGCCGTGATTATCGGCACGGGAT GCGGCGCGGGCGTGGCATTCAATGGGCGGACGCATATCGGCGGCAATGGCACGGCAGGTGAGTGGGGACACAATCCGCTA CCGTGGATGGACGAAGACGAACTGCGTTATCGCGAGGAAGTCCCTTGTTATTGCGGTAAACAAGGTTGTATTGAAACCTT TATTTCGGGCACGGGATTCGCGACGGATTATCGTCGTTTGAGCGGACATGCGCTGAAAGGCAGTGAAATTATCCGCCTGG TTGAAGAAAGCGATCCGGTAGCGGAACTGGCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTG AATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCGTTTATATCAAACGGTTGGGCAGTT GATTAAACAATTTGTCTTCGGCGGCGAATGTGAAACGCCGGTGAGTAAGGCGAAGCACGGTGATTCCAGCGGCGTACGCG GCGCTGCGTGGTGA
Upstream 100 bases:
>100_bases AAATTTAGCGGGCATGATAACGAATTGTCGGCGGCCTTGCATTGCCAATCCGGTTGTCCGTCTCTACGCTATTGATATTG AAAAAAATAAGGAGAGTACA
Downstream 100 bases:
>100_bases TGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA ATGTGCCAGAACCGCGTAGG
Product: fructokinase
Products: NA
Alternate protein names: D-fructose kinase; Manno(fructo)kinase [H]
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNVNS TWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRTHIGGNGTAGEWGHNPL PWMDEDELRYREEVPCYCGKQGCIETFISGTGFATDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVV NILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVSKAKHGDSSGVRGAAW
Sequences:
>Translated_297_residues MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNVNS TWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRTHIGGNGTAGEWGHNPL PWMDEDELRYREEVPCYCGKQGCIETFISGTGFATDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVV NILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVSKAKHGDSSGVRGAAW >Mature_297_residues MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNVNS TWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRTHIGGNGTAGEWGHNPL PWMDEDELRYREEVPCYCGKQGCIETFISGTGFATDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVV NILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVSKAKHGDSSGVRGAAW
Specific function: Catalyzes the phosphorylation of fructose to fructose-6- P. Has also low level glucokinase activity in vitro. Is not able to phosphorylate D-ribose, D-mannitol, D-sorbitol, inositol, and L-threonine [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI87081733, Length=297, Percent_Identity=98.6531986531986, Blast_Score=601, Evalue=1e-173, Organism=Escherichia coli, GI1787363, Length=305, Percent_Identity=40, Blast_Score=202, Evalue=2e-53, Organism=Escherichia coli, GI1786891, Length=272, Percent_Identity=22.7941176470588, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790522, Length=268, Percent_Identity=27.2388059701493, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 31805; Mature: 31805
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTV CEEECCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GMGIPGSISPYTGVVKNVNSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAA CCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHH GAQTVFAVIIGTGCGAGVAFNGRTHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGK HHHHEEHHEEECCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC QGCIETFISGTGFATDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVV HHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVSKAKHGDSSGVRGAAW HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTV CEEECCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GMGIPGSISPYTGVVKNVNSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAA CCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHH GAQTVFAVIIGTGCGAGVAFNGRTHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGK HHHHEEHHEEECCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC QGCIETFISGTGFATDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVV HHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVSKAKHGDSSGVRGAAW HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8807285; 9278503; 1744033 [H]