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The map label for this gene is dcyD [C]

Identifier: 161484715

GI number: 161484715

Start: 9916

End: 10905

Strand: Direct

Name: dcyD [C]

Synonym: PF0010

Alternate gene names: 161484715

Gene position: 9916-10905 (Clockwise)

Preceding gene: 18976381

Following gene: 18976384

Centisome position: 0.52

GC content: 40.1

Gene sequence:

>990_bases
ATGCATCCAAAAGTTCAATCTCTTCTATCAAAATTCCCTAGAGTTGAATTAATCCCATGGGAAACACCAATTCAATATTT
GCCTAACATAAGCAAACTTGTAGGGGCTGATATTTACGTCAAAAGGGACGACCTCACAGGGCTTGGAATCGGAGGGAACA
AAATTAGAAAACTGGAATACCTGCTGGGAGATGCAATAATAAGAAAAGCCGATGTAATAATAACTGTAGGTGCTGTACAC
TCAAACCACGCGTTTGTAACAGGCTTGGCAGCAAAAAAGTTAGGGTTTGATGTAGTTCTAGTTTTAAGAGGAAAGGAAGA
ATTAAGGGGAAACTACCTGCTGGACAAAATCATGGGGATAGAAACGAGAGTTTATGAAGCTAAAGATTCTTTTGAACTTA
TGAAATATGCTGAGGAAGTTGCCAAAGAACTAGAAGAAAAGGGAAGAAAGCCATATATAATACCTGTCGGAGGAGCTTCT
CCGGTCGGAACATTGGGTTATGTTAGAGCTAGTGGAGAGATCGCAGAGCAGGGAAATAGAATTGGAGTTAACTTTGACAG
CATTGTCGTTGCAACGGGTAGCGGAGGTACACTAGCTGGACTATCTGTAGGATTGGCAATTTTAAGGAAGGAAACAAGGG
CAATTGGTATGGCAGTTGGAAAGTTTGGAGAGACGATGGTTAATAAAGTGGAAGAACTTGCAAAAGCAACTGGAGAGTTC
ATCGGAGTGAAAAATTTAAAGCTAAAAATTGAGCTCTATGATTACAGCTTTGGAGAATATGGAAAAATAACAAGGGAAGT
TGCAGAAACCATTAGGCTAGTCGGAACAAAAGAAGGGGTAATCTTAGACCCTGTCTATACTGGAAAAGCATTCTACGGAT
TACTTGATCTCGCTAAAAAAGGAGAATTAGGGGAGAAAATACTGTTTATTCACACCGGAGGAATCTCTGGAACATTCCAT
TATGGGGACAAGATACTCTCATTCCTTTAG

Upstream 100 bases:

>100_bases
GGGTGCGGGGATGAGATAGGCCTCGGTGGATGGGAGCGGTGGAGGGTTCCCACCCTCGGGCGTGCCCGCCGCCGCTAGAA
ATTTTATATGGGTGGTAACT

Downstream 100 bases:

>100_bases
TAGTCTCAGACAACCGAGTGCTCATCATCATTCAGATAGTGCCGGTTTCGTCATCGACAGACAATTTGAAGCACCATCTG
GGCAGGATCCCTTATTGCAG

Product: 1-aminocyclopropane-1-carboxylate deaminase

Products: NA

Alternate protein names: ACC deaminase

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MHPKVQSLLSKFPRVELIPWETPIQYLPNISKLVGADIYVKRDDLTGLGIGGNKIRKLEYLLGDAIIRKADVIITVGAVH
SNHAFVTGLAAKKLGFDVVLVLRGKEELRGNYLLDKIMGIETRVYEAKDSFELMKYAEEVAKELEEKGRKPYIIPVGGAS
PVGTLGYVRASGEIAEQGNRIGVNFDSIVVATGSGGTLAGLSVGLAILRKETRAIGMAVGKFGETMVNKVEELAKATGEF
IGVKNLKLKIELYDYSFGEYGKITREVAETIRLVGTKEGVILDPVYTGKAFYGLLDLAKKGELGEKILFIHTGGISGTFH
YGDKILSFL

Sequences:

>Translated_329_residues
MHPKVQSLLSKFPRVELIPWETPIQYLPNISKLVGADIYVKRDDLTGLGIGGNKIRKLEYLLGDAIIRKADVIITVGAVH
SNHAFVTGLAAKKLGFDVVLVLRGKEELRGNYLLDKIMGIETRVYEAKDSFELMKYAEEVAKELEEKGRKPYIIPVGGAS
PVGTLGYVRASGEIAEQGNRIGVNFDSIVVATGSGGTLAGLSVGLAILRKETRAIGMAVGKFGETMVNKVEELAKATGEF
IGVKNLKLKIELYDYSFGEYGKITREVAETIRLVGTKEGVILDPVYTGKAFYGLLDLAKKGELGEKILFIHTGGISGTFH
YGDKILSFL
>Mature_329_residues
MHPKVQSLLSKFPRVELIPWETPIQYLPNISKLVGADIYVKRDDLTGLGIGGNKIRKLEYLLGDAIIRKADVIITVGAVH
SNHAFVTGLAAKKLGFDVVLVLRGKEELRGNYLLDKIMGIETRVYEAKDSFELMKYAEEVAKELEEKGRKPYIIPVGGAS
PVGTLGYVRASGEIAEQGNRIGVNFDSIVVATGSGGTLAGLSVGLAILRKETRAIGMAVGKFGETMVNKVEELAKATGEF
IGVKNLKLKIELYDYSFGEYGKITREVAETIRLVGTKEGVILDPVYTGKAFYGLLDLAKKGELGEKILFIHTGGISGTFH
YGDKILSFL

Specific function: Catalyzes The Alpha,Beta-Elimination Reaction Of D-Cysteine And Of Several D-Cysteine Derivatives. It Could Be A Defense Mechanism Against D-Cysteine. Can Also Catalyze The Degradation Of 3-Chloro-D-Alanine. [C]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family

Homologues:

Organism=Escherichia coli, GI87082000, Length=331, Percent_Identity=40.1812688821752, Blast_Score=216, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 1A1D_PYRFU (Q8U4R3)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_577739.2
- ProteinModelPortal:   Q8U4R3
- SMR:   Q8U4R3
- EnsemblBacteria:   EBPYRT00000004242
- GeneID:   1467838
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF0010
- NMPDR:   fig|186497.1.peg.10
- GeneTree:   EBGT00050000022240
- HOGENOM:   HBG689308
- OMA:   PYLVPIG
- ProtClustDB:   PRK14045
- BRENDA:   3.5.99.7
- InterPro:   IPR005966
- InterPro:   IPR001926
- TIGRFAMs:   TIGR01275

Pfam domain/function: PF00291 PALP; SSF53686 PyrdxlP-dep_enz_bsu

EC number: =3.5.99.7

Molecular weight: Translated: 35795; Mature: 35795

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPKVQSLLSKFPRVELIPWETPIQYLPNISKLVGADIYVKRDDLTGLGIGGNKIRKLEY
CCCHHHHHHHHCCCEEEEECCCCHHHCCCHHHHHCCEEEEEECCCCEECCCCHHHHHHHH
LLGDAIIRKADVIITVGAVHSNHAFVTGLAAKKLGFDVVLVLRGKEELRGNYLLDKIMGI
HHHHHHHHCCCEEEEEEEEECCCEEEEEHHHHHCCCEEEEEEECCHHHCCCHHHHHHHCC
ETRVYEAKDSFELMKYAEEVAKELEEKGRKPYIIPVGGASPVGTLGYVRASGEIAEQGNR
HHEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCHHHHCCCE
IGVNFDSIVVATGSGGTLAGLSVGLAILRKETRAIGMAVGKFGETMVNKVEELAKATGEF
EEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
IGVKNLKLKIELYDYSFGEYGKITREVAETIRLVGTKEGVILDPVYTGKAFYGLLDLAKK
EEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEECCEECCHHHHHHHHHHHC
GELGEKILFIHTGGISGTFHYGDKILSFL
CCCCCEEEEEEECCCCCEEHHHHHHHHCC
>Mature Secondary Structure
MHPKVQSLLSKFPRVELIPWETPIQYLPNISKLVGADIYVKRDDLTGLGIGGNKIRKLEY
CCCHHHHHHHHCCCEEEEECCCCHHHCCCHHHHHCCEEEEEECCCCEECCCCHHHHHHHH
LLGDAIIRKADVIITVGAVHSNHAFVTGLAAKKLGFDVVLVLRGKEELRGNYLLDKIMGI
HHHHHHHHCCCEEEEEEEEECCCEEEEEHHHHHCCCEEEEEEECCHHHCCCHHHHHHHCC
ETRVYEAKDSFELMKYAEEVAKELEEKGRKPYIIPVGGASPVGTLGYVRASGEIAEQGNR
HHEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCHHHHCCCE
IGVNFDSIVVATGSGGTLAGLSVGLAILRKETRAIGMAVGKFGETMVNKVEELAKATGEF
EEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
IGVKNLKLKIELYDYSFGEYGKITREVAETIRLVGTKEGVILDPVYTGKAFYGLLDLAKK
EEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEECCEECCHHHHHHHHHHHC
GELGEKILFIHTGGISGTFHYGDKILSFL
CCCCCEEEEEEECCCCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA