| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yfbT [H]
Identifier: 161353592
GI number: 161353592
Start: 2445897
End: 2446556
Strand: Reverse
Name: yfbT [H]
Synonym: STM2334
Alternate gene names: 161353592
Gene position: 2446556-2445897 (Counterclockwise)
Preceding gene: 16765662
Following gene: 16765660
Centisome position: 50.37
GC content: 57.73
Gene sequence:
>660_bases GTGCAGTGTAAAGGTTTTCTGTTTGATCTGGATGGAACGTTGGTTGACTCATTACCTGCCGTTGAACGCGCGTGGTGTAG CTGGGCCGATCGTTTTAACCTTGCTCATGATGAGGTGCTGGGCTTTATTCATGGCAAACAGGCGATCACCTCGTTGCGGC ATTTTATGGCGGGTAAATCGGAGGCGGAAATTGCCGCTGAGTTTACGCGCCTGGAGCAAATAGAAGCCACTGAAACCGCA GGGATCACCGCGCTGCCGGGGGCAGTCGATTTACTCAATCACCTGAATAAAGTGGGCATTCCGTGGGCTATCGTCACCTC CGGTTCAATGCCGGTCGCGCGTGCGCGCCATCAGGTCGCGGGCCTTCCAGCGCCAGAGGTGTTTGTCACCGCCGAACGAG TCAAACGCGGCAAACCGGAGCCGGATGCGTATTTGCTGGGCGCACAACTGCTTGGCCTGGCCCCTCAGGAGTGCGTCGTA GTAGAAGATGCCCCGGCTGGCGTGCTGTCCGGGCTGGCTGCGGGCTGCCACGTCATTGCGGTCAATGCGCCGGCCGACAC GCCGCGTCTGGCGGATGTTGATTTTGCGTTGGATAGCCTGACGCAATTATCGGTCGCTAAACAACCAAACGGCGATGTGG TGGTGTTAAGAAAGACCTGA
Upstream 100 bases:
>100_bases AAATACCAGCGGATGTTGAATGTCTGGCATGCCTGCCCGCGTCAGTACCACCTGAGCGCGAATGAAATCAATCAAATCAT TAATGCCTGAGGAGGCTCGC
Downstream 100 bases:
>100_bases TCATGATATCGCCCCGCTTTGGCGGGGCATATTTATGGCAGAATCGCGTTATCTTCTCATCTGACAAGGATATGTTGTGA ACGGTGAATTGATTTGGGTT
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MQCKGFLFDLDGTLVDSLPAVERAWCSWADRFNLAHDEVLGFIHGKQAITSLRHFMAGKSEAEIAAEFTRLEQIEATETA GITALPGAVDLLNHLNKVGIPWAIVTSGSMPVARARHQVAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV VEDAPAGVLSGLAAGCHVIAVNAPADTPRLADVDFALDSLTQLSVAKQPNGDVVVLRKT
Sequences:
>Translated_219_residues MQCKGFLFDLDGTLVDSLPAVERAWCSWADRFNLAHDEVLGFIHGKQAITSLRHFMAGKSEAEIAAEFTRLEQIEATETA GITALPGAVDLLNHLNKVGIPWAIVTSGSMPVARARHQVAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV VEDAPAGVLSGLAAGCHVIAVNAPADTPRLADVDFALDSLTQLSVAKQPNGDVVVLRKT >Mature_219_residues MQCKGFLFDLDGTLVDSLPAVERAWCSWADRFNLAHDEVLGFIHGKQAITSLRHFMAGKSEAEIAAEFTRLEQIEATETA GITALPGAVDLLNHLNKVGIPWAIVTSGSMPVARARHQVAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV VEDAPAGVLSGLAAGCHVIAVNAPADTPRLADVDFALDSLTQLSVAKQPNGDVVVLRKT
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=184, Percent_Identity=30.9782608695652, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI207113149, Length=208, Percent_Identity=27.4038461538462, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87082080, Length=215, Percent_Identity=86.5116279069767, Blast_Score=361, Evalue=1e-101, Organism=Escherichia coli, GI1789046, Length=189, Percent_Identity=30.1587301587302, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1790151, Length=214, Percent_Identity=29.9065420560748, Blast_Score=64, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6321834, Length=228, Percent_Identity=31.5789473684211, Blast_Score=98, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321833, Length=228, Percent_Identity=30.2631578947368, Blast_Score=90, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6322136, Length=191, Percent_Identity=34.5549738219895, Blast_Score=79, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6320905, Length=197, Percent_Identity=34.5177664974619, Blast_Score=78, Evalue=1e-15, Organism=Drosophila melanogaster, GI20129151, Length=198, Percent_Identity=29.7979797979798, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23222; Mature: 23222
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQCKGFLFDLDGTLVDSLPAVERAWCSWADRFNLAHDEVLGFIHGKQAITSLRHFMAGKS CCCCCEEEECCCHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EAEIAAEFTRLEQIEATETAGITALPGAVDLLNHLNKVGIPWAIVTSGSMPVARARHQVA HHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHC GLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIA CCCCCHHEEEHHHHHCCCCCCCCEEHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEE VNAPADTPRLADVDFALDSLTQLSVAKQPNGDVVVLRKT EECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECC >Mature Secondary Structure MQCKGFLFDLDGTLVDSLPAVERAWCSWADRFNLAHDEVLGFIHGKQAITSLRHFMAGKS CCCCCEEEECCCHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EAEIAAEFTRLEQIEATETAGITALPGAVDLLNHLNKVGIPWAIVTSGSMPVARARHQVA HHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHC GLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIA CCCCCHHEEEHHHHHCCCCCCCCEEHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEE VNAPADTPRLADVDFALDSLTQLSVAKQPNGDVVVLRKT EECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]