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The map label for this gene is ybeB [H]

Identifier: 16127662

GI number: 16127662

Start: 3676177

End: 3676518

Strand: Direct

Name: ybeB [H]

Synonym: CC_3432

Alternate gene names: 16127662

Gene position: 3676177-3676518 (Clockwise)

Preceding gene: 16127661

Following gene: 16127663

Centisome position: 91.52

GC content: 66.67

Gene sequence:

>342_bases
GTGAAGGCGCTGGAGCGCCTCATCCTCGACCGCCTTGACGACGACAAGGCCCAGGACATCGTCCACATCGACCTGACGGA
CAAGAGCTCGGTCGCCGACAGCCTGATCGTGGCGTCGGGCCGTTCGCACCGTCACGTCGGCGCTCTGGCCGATCACATCC
TGCGCGCCCTGAAGGAAAACGGCTTCGGCAAGGCGCGGGTCGAAGGCCTGCCGCACTGCGACTGGGTGCTGATCGACGCC
GGCGACGTCGTCGTGCACCTGTTCCGTCCCGAAGTGCGCAGCTTCTACAACATCGAGAAGATCTGGGCGGTCGACGCCCC
GCACCGCACCGCGGCGAACTGA

Upstream 100 bases:

>100_bases
GAGCAATCCGCTGCGTAGCGACCCCGCGCATAGTGCGCATGAAGGCCCGGCCGGCGCCGAGTCTTCGACTGAATCCCCCG
GCCTGAGTCCGGTTCTCGAC

Downstream 100 bases:

>100_bases
TACGGCAAGGCCGTCGCTCCACGAGCGACGGCCTTTAGCTTTTTTGCTTGGCGCGTGGCGGGCGCCGAAACCGGCTTCCA
CTTTCGGCTGCCACGCTTGC

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKALERLILDRLDDDKAQDIVHIDLTDKSSVADSLIVASGRSHRHVGALADHILRALKENGFGKARVEGLPHCDWVLIDA
GDVVVHLFRPEVRSFYNIEKIWAVDAPHRTAAN

Sequences:

>Translated_113_residues
MKALERLILDRLDDDKAQDIVHIDLTDKSSVADSLIVASGRSHRHVGALADHILRALKENGFGKARVEGLPHCDWVLIDA
GDVVVHLFRPEVRSFYNIEKIWAVDAPHRTAAN
>Mature_113_residues
MKALERLILDRLDDDKAQDIVHIDLTDKSSVADSLIVASGRSHRHVGALADHILRALKENGFGKARVEGLPHCDWVLIDA
GDVVVHLFRPEVRSFYNIEKIWAVDAPHRTAAN

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=101, Percent_Identity=29.7029702970297, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI87081768, Length=102, Percent_Identity=41.1764705882353, Blast_Score=99, Evalue=8e-23,
Organism=Drosophila melanogaster, GI19923046, Length=102, Percent_Identity=31.3725490196078, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 12613; Mature: 12613

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALERLILDRLDDDKAQDIVHIDLTDKSSVADSLIVASGRSHRHVGALADHILRALKEN
CHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHC
GFGKARVEGLPHCDWVLIDAGDVVVHLFRPEVRSFYNIEKIWAVDAPHRTAAN
CCCCEEECCCCCCCEEEEECCCEEEEEECHHHHHHHCHHHEEEECCCCCCCCC
>Mature Secondary Structure
MKALERLILDRLDDDKAQDIVHIDLTDKSSVADSLIVASGRSHRHVGALADHILRALKEN
CHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHC
GFGKARVEGLPHCDWVLIDAGDVVVHLFRPEVRSFYNIEKIWAVDAPHRTAAN
CCCCEEECCCCCCCEEEEECCCEEEEEECHHHHHHHCHHHEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]