| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is ygjG [C]
Identifier: 16127373
GI number: 16127373
Start: 3385038
End: 3386357
Strand: Direct
Name: ygjG [C]
Synonym: CC_3143
Alternate gene names: 16127373
Gene position: 3385038-3386357 (Clockwise)
Preceding gene: 16127361
Following gene: 16127375
Centisome position: 84.27
GC content: 67.12
Gene sequence:
>1320_bases ATGCCCGATTTCGGCGCCAACGACCTCGACGCCTTCTGGATGCCGTTCACGCCGAACCGGCGGTTCAAGCGCCATCCGCG CATGCTCTCCTCAGCCAGCGGCATGTGGTACCGCACGCCCGAGAGCCGCGAGGTGCTGGACGCGACCTCGGGCCTCTGGT GCGTCAACGCCGGCCATGATCGCCCCAAGATCCGCGAGGCCATCCAGAAGCAGGCGGCCGAAATGGACTACGCGCCCTGC TTCAACATGGGCCATCCGCTAGCCTTCCAGTTCGCCTCGCGTCTGGCGCAGATCACGCCGAAGGGCCTGGACCGGATCTT CTTCACCAATTCGGGTTCGGAGTCGGTCGACACGGCGCTGAAGATCGCCCTGGCCTATCATCGCGCGCGCGGCAAGGGGA CCAAGACCCGGCTGATCGGGCGCGAGCGCGGCTATCACGGCGTCGGCTTTGGCGGCATCTCGGTGGGGGGCATTCCCAAG AACCGGATGTATTTCGGCAGCTTGCTGACCGGCGTCGACCACCTGCCCCACACCCATGGCCTGCCGGGCAACACCTGCGC TAAGGGCCAACCCGAGAACGGCGCGCACCTGGCCGATGATCTGGAACGGATCGTCGCCTTGCACGACGCCTCCAACATCG CCGCCGTCATCGTCGAGCCGGTCGCCGGTTCAACGGGCGTGCTGATTCCGCCGAAGGGTTATCTGGAACGCCTGCGAGCG ATCTGCGACAAGCACGACATCCTGCTGATCTTCGACGAGGTGATCACCGGCTTTGGACGGGTCGGCGCGCCGTTCGCCGC CGAACGCTTCGGCGTCACGCCCGACCTGATCTGCATGGCCAAGGGCCTGACCAACGCCGCCGTGCCCTGCGGCGCCGTGG CGGCCTCGGGTAAGATCTATGATGCGATGATGGACGGCGCCGACGCGCCCATCGAGCTCTTCCACGGCTACACCTATTCG GCCCACCCGCTGGCCTGCGCCGCCGGTCTCGCGACGCTGGAGACCTATCGCGAGGACGACCTCTTCGCGCGCGCCGCCGG GCTGGAGGGCTATTGGCAGGACGCGATGCACAGCCTGGCCGACGCCCGCCACGTCGTGGATGTCCGCAATCTCGGGCTCG TCGCCGGGATCGAGCTTGAACCCCGTCCCGGCGCCCCCACCGCGCGGGCGATGGAGGTCTTCGAGACCTGCTTCGACGAG GGTCTGCTGATCCGTGTGACCGGCGACATCATCGCCCTGTCGCCGCCGCTGATCCTGGAGAAGGATCACATCGACCGGAT GGTCGAGACGATCCGCAGGGTGCTGGGTCAGGTCGATTAG
Upstream 100 bases:
>100_bases GCGAGAGGCCGGCGGGTCTTCATGCATGGGTTTCCAAGAAGGCCTTGCCAGTTGGCCCTGAATTGCGATCACAATGCAAG CGCTCGCAAGGATGCTGCCC
Downstream 100 bases:
>100_bases ACCAGCTTAGCTCCAGAAGGCGCCGCCCTAGGCGGTCGCGTCCGGGAAGCCGCGCCACTCGACCCATTCGCCGTAGGGAT GGCAGATGGCGAGGATCGTC
Product: beta alanine--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MPDFGANDLDAFWMPFTPNRRFKRHPRMLSSASGMWYRTPESREVLDATSGLWCVNAGHDRPKIREAIQKQAAEMDYAPC FNMGHPLAFQFASRLAQITPKGLDRIFFTNSGSESVDTALKIALAYHRARGKGTKTRLIGRERGYHGVGFGGISVGGIPK NRMYFGSLLTGVDHLPHTHGLPGNTCAKGQPENGAHLADDLERIVALHDASNIAAVIVEPVAGSTGVLIPPKGYLERLRA ICDKHDILLIFDEVITGFGRVGAPFAAERFGVTPDLICMAKGLTNAAVPCGAVAASGKIYDAMMDGADAPIELFHGYTYS AHPLACAAGLATLETYREDDLFARAAGLEGYWQDAMHSLADARHVVDVRNLGLVAGIELEPRPGAPTARAMEVFETCFDE GLLIRVTGDIIALSPPLILEKDHIDRMVETIRRVLGQVD
Sequences:
>Translated_439_residues MPDFGANDLDAFWMPFTPNRRFKRHPRMLSSASGMWYRTPESREVLDATSGLWCVNAGHDRPKIREAIQKQAAEMDYAPC FNMGHPLAFQFASRLAQITPKGLDRIFFTNSGSESVDTALKIALAYHRARGKGTKTRLIGRERGYHGVGFGGISVGGIPK NRMYFGSLLTGVDHLPHTHGLPGNTCAKGQPENGAHLADDLERIVALHDASNIAAVIVEPVAGSTGVLIPPKGYLERLRA ICDKHDILLIFDEVITGFGRVGAPFAAERFGVTPDLICMAKGLTNAAVPCGAVAASGKIYDAMMDGADAPIELFHGYTYS AHPLACAAGLATLETYREDDLFARAAGLEGYWQDAMHSLADARHVVDVRNLGLVAGIELEPRPGAPTARAMEVFETCFDE GLLIRVTGDIIALSPPLILEKDHIDRMVETIRRVLGQVD >Mature_438_residues PDFGANDLDAFWMPFTPNRRFKRHPRMLSSASGMWYRTPESREVLDATSGLWCVNAGHDRPKIREAIQKQAAEMDYAPCF NMGHPLAFQFASRLAQITPKGLDRIFFTNSGSESVDTALKIALAYHRARGKGTKTRLIGRERGYHGVGFGGISVGGIPKN RMYFGSLLTGVDHLPHTHGLPGNTCAKGQPENGAHLADDLERIVALHDASNIAAVIVEPVAGSTGVLIPPKGYLERLRAI CDKHDILLIFDEVITGFGRVGAPFAAERFGVTPDLICMAKGLTNAAVPCGAVAASGKIYDAMMDGADAPIELFHGYTYSA HPLACAAGLATLETYREDDLFARAAGLEGYWQDAMHSLADARHVVDVRNLGLVAGIELEPRPGAPTARAMEVFETCFDEG LLIRVTGDIIALSPPLILEKDHIDRMVETIRRVLGQVD
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=416, Percent_Identity=27.6442307692308, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI13994255, Length=442, Percent_Identity=28.0542986425339, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI284507298, Length=332, Percent_Identity=29.5180722891566, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI37574042, Length=401, Percent_Identity=26.9326683291771, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI226442709, Length=391, Percent_Identity=26.8542199488491, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI226442705, Length=364, Percent_Identity=26.9230769230769, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI24119277, Length=430, Percent_Identity=24.4186046511628, Blast_Score=106, Evalue=4e-23, Organism=Escherichia coli, GI145693181, Length=401, Percent_Identity=32.9177057356608, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI1786991, Length=433, Percent_Identity=30.715935334873, Blast_Score=172, Evalue=4e-44, Organism=Escherichia coli, GI1789759, Length=410, Percent_Identity=28.5365853658537, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1789016, Length=435, Percent_Identity=28.735632183908, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1788044, Length=413, Percent_Identity=27.6029055690073, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1787560, Length=437, Percent_Identity=28.1464530892449, Blast_Score=131, Evalue=7e-32, Organism=Escherichia coli, GI1786349, Length=326, Percent_Identity=28.2208588957055, Blast_Score=101, Evalue=8e-23, Organism=Caenorhabditis elegans, GI32564660, Length=441, Percent_Identity=28.7981859410431, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI25144271, Length=423, Percent_Identity=26.0047281323877, Blast_Score=143, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71992977, Length=446, Percent_Identity=27.8026905829596, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI25144274, Length=308, Percent_Identity=26.9480519480519, Blast_Score=114, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6323470, Length=422, Percent_Identity=29.1469194312796, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6324386, Length=439, Percent_Identity=26.4236902050114, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6324432, Length=414, Percent_Identity=24.8792270531401, Blast_Score=115, Evalue=1e-26, Organism=Drosophila melanogaster, GI161085790, Length=448, Percent_Identity=28.5714285714286, Blast_Score=151, Evalue=9e-37, Organism=Drosophila melanogaster, GI21357415, Length=417, Percent_Identity=25.6594724220624, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI28574759, Length=432, Percent_Identity=28.7037037037037, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI21356575, Length=430, Percent_Identity=26.7441860465116, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 47629; Mature: 47498
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFGANDLDAFWMPFTPNRRFKRHPRMLSSASGMWYRTPESREVLDATSGLWCVNAGHD CCCCCCCCCCCEECCCCCCCHHHHCCHHHHHCCCCEEECCCCHHHHHHCCCEEEEECCCC RPKIREAIQKQAAEMDYAPCFNMGHPLAFQFASRLAQITPKGLDRIFFTNSGSESVDTAL CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH KIALAYHRARGKGTKTRLIGRERGYHGVGFGGISVGGIPKNRMYFGSLLTGVDHLPHTHG HHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCC LPGNTCAKGQPENGAHLADDLERIVALHDASNIAAVIVEPVAGSTGVLIPPKGYLERLRA CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCHHHHHHHHH ICDKHDILLIFDEVITGFGRVGAPFAAERFGVTPDLICMAKGLTNAAVPCGAVAASGKIY HHCCCCEEEEEHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHCCCCHH DAMMDGADAPIELFHGYTYSAHPLACAAGLATLETYREDDLFARAAGLEGYWQDAMHSLA HHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DARHVVDVRNLGLVAGIELEPRPGAPTARAMEVFETCFDEGLLIRVTGDIIALSPPLILE HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCEEEECCCCEEC KDHIDRMVETIRRVLGQVD HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PDFGANDLDAFWMPFTPNRRFKRHPRMLSSASGMWYRTPESREVLDATSGLWCVNAGHD CCCCCCCCCCEECCCCCCCHHHHCCHHHHHCCCCEEECCCCHHHHHHCCCEEEEECCCC RPKIREAIQKQAAEMDYAPCFNMGHPLAFQFASRLAQITPKGLDRIFFTNSGSESVDTAL CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH KIALAYHRARGKGTKTRLIGRERGYHGVGFGGISVGGIPKNRMYFGSLLTGVDHLPHTHG HHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCC LPGNTCAKGQPENGAHLADDLERIVALHDASNIAAVIVEPVAGSTGVLIPPKGYLERLRA CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCHHHHHHHHH ICDKHDILLIFDEVITGFGRVGAPFAAERFGVTPDLICMAKGLTNAAVPCGAVAASGKIY HHCCCCEEEEEHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHCCCCHH DAMMDGADAPIELFHGYTYSAHPLACAAGLATLETYREDDLFARAAGLEGYWQDAMHSLA HHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DARHVVDVRNLGLVAGIELEPRPGAPTARAMEVFETCFDEGLLIRVTGDIIALSPPLILE HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCEEEECCCCEEC KDHIDRMVETIRRVLGQVD HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]