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The map label for this gene is 16127168

Identifier: 16127168

GI number: 16127168

Start: 3162028

End: 3162915

Strand: Direct

Name: 16127168

Synonym: CC_2938

Alternate gene names: NA

Gene position: 3162028-3162915 (Clockwise)

Preceding gene: 16127165

Following gene: 16127179

Centisome position: 78.72

GC content: 72.07

Gene sequence:

>888_bases
ATGCTTAACGATTCCTTGAGGCCCGCGCGGGATGATGCACGCACCTTCTGGAGACTTGTCTTCATGTGTCGCAAGCGCGC
GCTCATCGCAACCGTTCTCGCCCCCATCGCCCTGGTCCTGGCGACCCCGGTCTTCGCCGCCGATCCGCCCAAGGCTGACG
CCGGCAAGACCGCCAAGGCCGCGCCGGCGCCGGTGAAGGCCTCGGCCCAGCAGCGGACCGAGGCGCGCCGCCTGGACCCG
CTGGCCCAGGCCGCCTTCTGGGGCGCCGAATTCGAGGTTGATCCGGCCGACGCTGAGGCCGGCGCGGGCCTGGCCAAAGC
GCTGCGCGCCCTGGGTCGCGCCGACGAGGCCGCCATCGCCGCGACCAAGGGGCTGATCGCCCATCCGGACGACACCGGCC
TCTTGCTGGAACTGGCCCGCGCCCATATCGCCCGGGGCCAGGGCTTTTATGCGATCGAGCCGGCCCGCAAGGTCGCCGCG
CTCTCGCCCAAGGACTGGCGTCCGCTGACCTTGCTGGGCGTGGCCTATGAACAGGCCGAGCGGGACGAGGAAGCCGAGGC
CGCCCACCGCCAGGCGATCGCGCTGGCGCCCAACGAGGCGACCCCGATGGCCAACCATGCGATGCATCTGGCCGCCAGGG
GCGACCTGGCCGGCGCCGAAGCTGAGCTTCGCCGCGCCGTGACCCTGCCCTCAGCGGGGATCCAGGTGCGTCAGAACCTG
GCCCTGGTGGTCGGCCTGCAGGGCCGCTTGCCGGAAGCCGAAAAGCTGGTCCGCGCCGACCTGCCGCCGGAGCAGGTGGC
CAATAACCTGGCATATCTGCGCGCCGCCGTGGGCCAGGCGGGTCAGTCCCGCAGCTGGGACGCCATGAGGGCCGGCGGAG
GGCGCTAG

Upstream 100 bases:

>100_bases
ACCTCGGACTCCGCCACGGGATGCACCGGGATCGCCTGGCCGTCGGCCTTAGCCAGGATCGGATGCGCGGCGTCGGTCAT
CGGCGAAACCCTTAAAATCT

Downstream 100 bases:

>100_bases
CAGCGCGCCCCCTACCCCGCCAGGGCCTGGCTCACCACCTGGGTGGCCTTGGTGAAGGTGGTCAGCAGCGGCGTCGTCAG
CACTTCCTTCAGGGTGAAGG

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Pilus Assembly Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide; Flp Pilus Assembly Protein TadD; Tetratricopeptide-Repeat Containing Protein

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MLNDSLRPARDDARTFWRLVFMCRKRALIATVLAPIALVLATPVFAADPPKADAGKTAKAAPAPVKASAQQRTEARRLDP
LAQAAFWGAEFEVDPADAEAGAGLAKALRALGRADEAAIAATKGLIAHPDDTGLLLELARAHIARGQGFYAIEPARKVAA
LSPKDWRPLTLLGVAYEQAERDEEAEAAHRQAIALAPNEATPMANHAMHLAARGDLAGAEAELRRAVTLPSAGIQVRQNL
ALVVGLQGRLPEAEKLVRADLPPEQVANNLAYLRAAVGQAGQSRSWDAMRAGGGR

Sequences:

>Translated_295_residues
MLNDSLRPARDDARTFWRLVFMCRKRALIATVLAPIALVLATPVFAADPPKADAGKTAKAAPAPVKASAQQRTEARRLDP
LAQAAFWGAEFEVDPADAEAGAGLAKALRALGRADEAAIAATKGLIAHPDDTGLLLELARAHIARGQGFYAIEPARKVAA
LSPKDWRPLTLLGVAYEQAERDEEAEAAHRQAIALAPNEATPMANHAMHLAARGDLAGAEAELRRAVTLPSAGIQVRQNL
ALVVGLQGRLPEAEKLVRADLPPEQVANNLAYLRAAVGQAGQSRSWDAMRAGGGR
>Mature_295_residues
MLNDSLRPARDDARTFWRLVFMCRKRALIATVLAPIALVLATPVFAADPPKADAGKTAKAAPAPVKASAQQRTEARRLDP
LAQAAFWGAEFEVDPADAEAGAGLAKALRALGRADEAAIAATKGLIAHPDDTGLLLELARAHIARGQGFYAIEPARKVAA
LSPKDWRPLTLLGVAYEQAERDEEAEAAHRQAIALAPNEATPMANHAMHLAARGDLAGAEAELRRAVTLPSAGIQVRQNL
ALVVGLQGRLPEAEKLVRADLPPEQVANNLAYLRAAVGQAGQSRSWDAMRAGGGR

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31202; Mature: 31202

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDSLRPARDDARTFWRLVFMCRKRALIATVLAPIALVLATPVFAADPPKADAGKTAKA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCC
APAPVKASAQQRTEARRLDPLAQAAFWGAEFEVDPADAEAGAGLAKALRALGRADEAAIA
CCCCCCHHHHHHHHHHHHCHHHHHHHCCCCEEECCCCCHHCCHHHHHHHHHCCCCHHHHH
ATKGLIAHPDDTGLLLELARAHIARGQGFYAIEPARKVAALSPKDWRPLTLLGVAYEQAE
HHCCCEECCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCEEHHHHHHHHHH
RDEEAEAAHRQAIALAPNEATPMANHAMHLAARGDLAGAEAELRRAVTLPSAGIQVRQNL
CCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHCCE
ALVVGLQGRLPEAEKLVRADLPPEQVANNLAYLRAAVGQAGQSRSWDAMRAGGGR
EEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MLNDSLRPARDDARTFWRLVFMCRKRALIATVLAPIALVLATPVFAADPPKADAGKTAKA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCC
APAPVKASAQQRTEARRLDPLAQAAFWGAEFEVDPADAEAGAGLAKALRALGRADEAAIA
CCCCCCHHHHHHHHHHHHCHHHHHHHCCCCEEECCCCCHHCCHHHHHHHHHCCCCHHHHH
ATKGLIAHPDDTGLLLELARAHIARGQGFYAIEPARKVAALSPKDWRPLTLLGVAYEQAE
HHCCCEECCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCEEHHHHHHHHHH
RDEEAEAAHRQAIALAPNEATPMANHAMHLAARGDLAGAEAELRRAVTLPSAGIQVRQNL
CCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHCCE
ALVVGLQGRLPEAEKLVRADLPPEQVANNLAYLRAAVGQAGQSRSWDAMRAGGGR
EEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA