| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is atoS [C]
Identifier: 16127106
GI number: 16127106
Start: 3096815
End: 3099199
Strand: Direct
Name: atoS [C]
Synonym: CC_2874
Alternate gene names: 16127106
Gene position: 3096815-3099199 (Clockwise)
Preceding gene: 16127103
Following gene: 16127107
Centisome position: 77.09
GC content: 70.82
Gene sequence:
>2385_bases ATGGAGAAGAAAGACAACTCGATCCGCGCCTTTGACGACCAAGGACGTATCCACGCGCTGATTAGCGCCTGGCTCATCCC TCCGGTTCCACCGCCAGCGTGGCTGTGCGCGATCGCGTCGATCATCGGCGTGGCCATGGCCATCCTGATGCGCGTCGGCC TGCTGGGCCTGAGCAGCGGCGTCGGGGCGACCCAGCCCTTTTTCCCCGCCATCATGCTGGTGACGCTCTATGCCGGATGG CGCTGGGGGATGATCCCCACGCTCGCCGGCGTCGTCTTCAGCTGGTGGCTGTGGGGCGGACGTCATGATGAGCCGCTGAA CAGCGACGAACTGTCGAGCATCGTCATCTATCTGATCTGCGGCCTGATGGTCGCAGCGGTCGCCGAAGGGCTGCGCGGCG CCATGCGGGGCCTGGCTGCAGCCCGCGCCCAACGCGCCAATGTCGAGGCCAGGCTGCGGGTCACCCAGGCGGCCGCCGGG GTGGGGCCCTGGGACTACGACCTCGCAACCGGCGAGCTCTATCTGTCGCCGGCGGCGCGACGGAACCTGGGCGTTCCGGA GAACGCCGACATCCTGCTGAGCGACCTGCCGCGCTTTGTTCATCCCGACGATCGCGCGATGACCGAAGCCGTCGTCTTCG GCGCGCTGGACGGCCTGACCGACTACGAGGTCGAGTATCGTCTGGCCGACACCAGCCAGGGCGAGCGCTGGGTGCACGGG CGCGGCGAGGTCATGCGCGACGACGCCGGCCAGCCGGTGCGGATGATCGGCCTGAACTTCGACGTCACCAACCGCCGCCG CGCCGAGGCCGAGGTGCGCGAAAGCGAGGCGCGGTTCCGGGCCCTGGCCGACAGCGCGCCGGCCCCCATGTGGGTGACCC GGTCCGACGGCGTCCGCGAGTTTGTCAACAACGCCTATGTCGCCTTCGTCGGCCTCGACTATGACAGCGCCCTGACCCTG GACTGGCGAACCCGCATCTTTCCGGAGGACCTGCCGCGCATACTCAAGGAGCAGGTCGCGGGCGAGACCTCGCGCCGGCC CTTCAGCCTCGAGGCGCGCTACCGCCGCGCGGACGGCGAATGGCGCTGGCTGAAGTCATTCTCGCAGCCGCGCTACGATC CCTCGGGCGCGTTCGCCGGCTTTATCGGCATGGCCTTCGACACCACCGAGGCCAAGCAGGCCGAGGCCAAGCTGACCGGC CTGAACGAACTGCTGGAAGAGCGGGTGACGGCCGCCCTCGCCGAACGCGACGCGGCCCAGGCCGCCCTGCTGCAGTCGCA GAAGCTGGAGGCGATCGGCCAGCTGACCGGGGGCGTGGCGCACGACTTCAACAACCTCTTGACGGTGATCATCGGCGCGC TGGACGTGGTCGAGCGTCACCCCGACGACGCGCGTCGGCGCGAGCGCATGATCGGCGCGGCCCTGGCGGCGGCCAAGCGC GGCGAGAAGCTGACCCAGCACCTGCTGGCCTTCGCCCGCCGCCAGCCCTTGAAGCCGGAGATCTGCCGCGTCGACGGCCT GATCGCCGAAAGCGAAGGCCTGCTGAAGCGGGCGCTGGGCGACGCCTATACCTTCCATCTGCGCCTGGGCGCGGGGGTTC GCAGCGCCCGCATCGACGCGGGCCAGTTCGAGGCCGCGCTGCTGAACCTGGTGGTCAACGCCCGCGACGCCACCCCGCCC GGCGGCGAGGTGAGCATCGAGTCCCGTCCGGTCACCCTGGATCGCAAGGAAGGCGATCTGGAGCCCGGCCAGTATCTGCG CGTGGCCGTGCGCGACACGGGGACGGGCATGGACGCGGCGACCATCGCCCGGGCCGTCGAGCCGTTCTTCACCACCAAGC CGCCCGGCGAGGGCACCGGGCTTGGGCTGTCGCAGGTCTATGGGTTCGCGCGCCAGAGCGGCGGGTCGGTGCTGATCGAA AGCACGCCGGGCCAAGGGGCCACCGTCGCCCTGCTGCTGCCCGTCAGCGCGGGGGACGCCGCCAGCGAAAGCCTGCCGCG CGTCGACCATATCCGCGCCCAGACGCCGTCGCGGGTGCTGCTGGTCGAGGACGACCCGCAGGTCGCCGAGCTGGTCGACG CGATGCTGAACGACCTTGGCCACTCGGTCGTGCGCGCCGGCGGGGTCGACGAGGCCCTCTCACGCCTGGAGCAGGACGAC GGCATCCAGCTGGTGCTCAGCGACGTGATCATGCCTGGCGGCAAGAGCGGCGTGGACCTGGCCGAGGCGCTGGCCGCCAG CCGTCCGGGCCTGCCGGTGGTGCTGTGCTCGGGCTATACGGGCGGCGACCAAGGCCGGGCGCGGGCGGGCGGCTGGCCGT TCATCAGCAAGCCGTTCTCGCTGGAGACCCTGGCCCAGGCCCTGGCCCAGGCGCGACCGCACTGA
Upstream 100 bases:
>100_bases AGCCCGGTGTTCAAAGCGGCGGCCATCATGATCTCCCGTGTTGCGCGTCTTAGGTAAGCGTGTCCATCCTCTTGGCAAGA CATCTTTGCCGGGAGCGGGG
Downstream 100 bases:
>100_bases CGGTTCAGCCCGGATCCGCCTGAAATCCTCATCCTGAGCTTGTCGAAAGACGAGGATGTCAGGCGTGCTCGCCCAACAGC ACCCGGCGAATGTCGCCCTT
Product: sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 794; Mature: 794
Protein sequence:
>794_residues MEKKDNSIRAFDDQGRIHALISAWLIPPVPPPAWLCAIASIIGVAMAILMRVGLLGLSSGVGATQPFFPAIMLVTLYAGW RWGMIPTLAGVVFSWWLWGGRHDEPLNSDELSSIVIYLICGLMVAAVAEGLRGAMRGLAAARAQRANVEARLRVTQAAAG VGPWDYDLATGELYLSPAARRNLGVPENADILLSDLPRFVHPDDRAMTEAVVFGALDGLTDYEVEYRLADTSQGERWVHG RGEVMRDDAGQPVRMIGLNFDVTNRRRAEAEVRESEARFRALADSAPAPMWVTRSDGVREFVNNAYVAFVGLDYDSALTL DWRTRIFPEDLPRILKEQVAGETSRRPFSLEARYRRADGEWRWLKSFSQPRYDPSGAFAGFIGMAFDTTEAKQAEAKLTG LNELLEERVTAALAERDAAQAALLQSQKLEAIGQLTGGVAHDFNNLLTVIIGALDVVERHPDDARRRERMIGAALAAAKR GEKLTQHLLAFARRQPLKPEICRVDGLIAESEGLLKRALGDAYTFHLRLGAGVRSARIDAGQFEAALLNLVVNARDATPP GGEVSIESRPVTLDRKEGDLEPGQYLRVAVRDTGTGMDAATIARAVEPFFTTKPPGEGTGLGLSQVYGFARQSGGSVLIE STPGQGATVALLLPVSAGDAASESLPRVDHIRAQTPSRVLLVEDDPQVAELVDAMLNDLGHSVVRAGGVDEALSRLEQDD GIQLVLSDVIMPGGKSGVDLAEALAASRPGLPVVLCSGYTGGDQGRARAGGWPFISKPFSLETLAQALAQARPH
Sequences:
>Translated_794_residues MEKKDNSIRAFDDQGRIHALISAWLIPPVPPPAWLCAIASIIGVAMAILMRVGLLGLSSGVGATQPFFPAIMLVTLYAGW RWGMIPTLAGVVFSWWLWGGRHDEPLNSDELSSIVIYLICGLMVAAVAEGLRGAMRGLAAARAQRANVEARLRVTQAAAG VGPWDYDLATGELYLSPAARRNLGVPENADILLSDLPRFVHPDDRAMTEAVVFGALDGLTDYEVEYRLADTSQGERWVHG RGEVMRDDAGQPVRMIGLNFDVTNRRRAEAEVRESEARFRALADSAPAPMWVTRSDGVREFVNNAYVAFVGLDYDSALTL DWRTRIFPEDLPRILKEQVAGETSRRPFSLEARYRRADGEWRWLKSFSQPRYDPSGAFAGFIGMAFDTTEAKQAEAKLTG LNELLEERVTAALAERDAAQAALLQSQKLEAIGQLTGGVAHDFNNLLTVIIGALDVVERHPDDARRRERMIGAALAAAKR GEKLTQHLLAFARRQPLKPEICRVDGLIAESEGLLKRALGDAYTFHLRLGAGVRSARIDAGQFEAALLNLVVNARDATPP GGEVSIESRPVTLDRKEGDLEPGQYLRVAVRDTGTGMDAATIARAVEPFFTTKPPGEGTGLGLSQVYGFARQSGGSVLIE STPGQGATVALLLPVSAGDAASESLPRVDHIRAQTPSRVLLVEDDPQVAELVDAMLNDLGHSVVRAGGVDEALSRLEQDD GIQLVLSDVIMPGGKSGVDLAEALAASRPGLPVVLCSGYTGGDQGRARAGGWPFISKPFSLETLAQALAQARPH >Mature_794_residues MEKKDNSIRAFDDQGRIHALISAWLIPPVPPPAWLCAIASIIGVAMAILMRVGLLGLSSGVGATQPFFPAIMLVTLYAGW RWGMIPTLAGVVFSWWLWGGRHDEPLNSDELSSIVIYLICGLMVAAVAEGLRGAMRGLAAARAQRANVEARLRVTQAAAG VGPWDYDLATGELYLSPAARRNLGVPENADILLSDLPRFVHPDDRAMTEAVVFGALDGLTDYEVEYRLADTSQGERWVHG RGEVMRDDAGQPVRMIGLNFDVTNRRRAEAEVRESEARFRALADSAPAPMWVTRSDGVREFVNNAYVAFVGLDYDSALTL DWRTRIFPEDLPRILKEQVAGETSRRPFSLEARYRRADGEWRWLKSFSQPRYDPSGAFAGFIGMAFDTTEAKQAEAKLTG LNELLEERVTAALAERDAAQAALLQSQKLEAIGQLTGGVAHDFNNLLTVIIGALDVVERHPDDARRRERMIGAALAAAKR GEKLTQHLLAFARRQPLKPEICRVDGLIAESEGLLKRALGDAYTFHLRLGAGVRSARIDAGQFEAALLNLVVNARDATPP GGEVSIESRPVTLDRKEGDLEPGQYLRVAVRDTGTGMDAATIARAVEPFFTTKPPGEGTGLGLSQVYGFARQSGGSVLIE STPGQGATVALLLPVSAGDAASESLPRVDHIRAQTPSRVLLVEDDPQVAELVDAMLNDLGHSVVRAGGVDEALSRLEQDD GIQLVLSDVIMPGGKSGVDLAEALAASRPGLPVVLCSGYTGGDQGRARAGGWPFISKPFSLETLAQALAQARPH
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=245, Percent_Identity=28.9795918367347, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1790436, Length=247, Percent_Identity=29.5546558704453, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI87081816, Length=211, Percent_Identity=30.8056872037915, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI1788713, Length=555, Percent_Identity=22.8828828828829, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 85658; Mature: 85658
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKDNSIRAFDDQGRIHALISAWLIPPVPPPAWLCAIASIIGVAMAILMRVGLLGLSSG CCCCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VGATQPFFPAIMLVTLYAGWRWGMIPTLAGVVFSWWLWGGRHDEPLNSDELSSIVIYLIC CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GLMVAAVAEGLRGAMRGLAAARAQRANVEARLRVTQAAAGVGPWDYDLATGELYLSPAAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCCCCCCCCCCCCEEEECCHHH RNLGVPENADILLSDLPRFVHPDDRAMTEAVVFGALDGLTDYEVEYRLADTSQGERWVHG CCCCCCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECC RGEVMRDDAGQPVRMIGLNFDVTNRRRAEAEVRESEARFRALADSAPAPMWVTRSDGVRE CCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH FVNNAYVAFVGLDYDSALTLDWRTRIFPEDLPRILKEQVAGETSRRPFSLEARYRRADGE HHCCCEEEEEEECCCCEEEECHHHCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCC WRWLKSFSQPRYDPSGAFAGFIGMAFDTTEAKQAEAKLTGLNELLEERVTAALAERDAAQ HHHHHHHCCCCCCCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLQSQKLEAIGQLTGGVAHDFNNLLTVIIGALDVVERHPDDARRRERMIGAALAAAKR HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GEKLTQHLLAFARRQPLKPEICRVDGLIAESEGLLKRALGDAYTFHLRLGAGVRSARIDA HHHHHHHHHHHHHCCCCCCHHHHHCCEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCCC GQFEAALLNLVVNARDATPPGGEVSIESRPVTLDRKEGDLEPGQYLRVAVRDTGTGMDAA HHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCHHH TIARAVEPFFTTKPPGEGTGLGLSQVYGFARQSGGSVLIESTPGQGATVALLLPVSAGDA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCH ASESLPRVDHIRAQTPSRVLLVEDDPQVAELVDAMLNDLGHSVVRAGGVDEALSRLEQDD HHHCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC GIQLVLSDVIMPGGKSGVDLAEALAASRPGLPVVLCSGYTGGDQGRARAGGWPFISKPFS CCEEEHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC LETLAQALAQARPH HHHHHHHHHHCCCC >Mature Secondary Structure MEKKDNSIRAFDDQGRIHALISAWLIPPVPPPAWLCAIASIIGVAMAILMRVGLLGLSSG CCCCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VGATQPFFPAIMLVTLYAGWRWGMIPTLAGVVFSWWLWGGRHDEPLNSDELSSIVIYLIC CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GLMVAAVAEGLRGAMRGLAAARAQRANVEARLRVTQAAAGVGPWDYDLATGELYLSPAAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCCCCCCCCCCCCEEEECCHHH RNLGVPENADILLSDLPRFVHPDDRAMTEAVVFGALDGLTDYEVEYRLADTSQGERWVHG CCCCCCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECC RGEVMRDDAGQPVRMIGLNFDVTNRRRAEAEVRESEARFRALADSAPAPMWVTRSDGVRE CCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH FVNNAYVAFVGLDYDSALTLDWRTRIFPEDLPRILKEQVAGETSRRPFSLEARYRRADGE HHCCCEEEEEEECCCCEEEECHHHCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCC WRWLKSFSQPRYDPSGAFAGFIGMAFDTTEAKQAEAKLTGLNELLEERVTAALAERDAAQ HHHHHHHCCCCCCCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLQSQKLEAIGQLTGGVAHDFNNLLTVIIGALDVVERHPDDARRRERMIGAALAAAKR HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GEKLTQHLLAFARRQPLKPEICRVDGLIAESEGLLKRALGDAYTFHLRLGAGVRSARIDA HHHHHHHHHHHHHCCCCCCHHHHHCCEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCCC GQFEAALLNLVVNARDATPPGGEVSIESRPVTLDRKEGDLEPGQYLRVAVRDTGTGMDAA HHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCHHH TIARAVEPFFTTKPPGEGTGLGLSQVYGFARQSGGSVLIESTPGQGATVALLLPVSAGDA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCH ASESLPRVDHIRAQTPSRVLLVEDDPQVAELVDAMLNDLGHSVVRAGGVDEALSRLEQDD HHHCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC GIQLVLSDVIMPGGKSGVDLAEALAASRPGLPVVLCSGYTGGDQGRARAGGWPFISKPFS CCEEEHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC LETLAQALAQARPH HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA