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The map label for this gene is ydjA [H]

Identifier: 16126888

GI number: 16126888

Start: 2871939

End: 2872484

Strand: Direct

Name: ydjA [H]

Synonym: CC_2653

Alternate gene names: 16126888

Gene position: 2871939-2872484 (Clockwise)

Preceding gene: 16126884

Following gene: 16126890

Centisome position: 71.5

GC content: 70.7

Gene sequence:

>546_bases
GTGGCCTTCCTGGCCAAGCGCCGCTCGGCCAGCGCGATGACCTTGACCGCGCCGGGTCCCAATGATGAGCAACTGGGCGA
GATCCTGCGGATCGCCGCGCGCGTGCCCGATCACGGCAAGCTGGCCCCCTGGCGCTTTATTGTGCTGACGGGCGAGGCCA
AGGACGCGTTCGCCGAACGCATCGCCCCGCTCGCCGACAGCCAGGCCAATCCGACCAAGGCCACGGCGGCGCTGCGCAAG
CTGACCCGTCCGCCGGTCTGCGTGGCGGTGATCTCCCGGCACATCCCGGGCGAAATCCCTGAGTGGGAGCAGCGCCAGAG
CGCCTCGGCGGTCTGCCACCAGATGCTGCTGGCCGCAGCCGCCCTGGGCTGGGGCGCCAACTGGATCACCGACTGGTACA
GCTATGACCCGCGCGCGACCGCGCTCCTGGGCCTGGCGGACGGCGAACAGGTGGCCGGCTACCTCTATCTCGGCACGACC
ACCGAGCAGCCGCAGGAGCGCCAACGCCCCGACGTGGCGGCGATCACCAGCTACTGGTCAGCCTAG

Upstream 100 bases:

>100_bases
CTGCGACTTACAACGCTTCGGAGACATCGTCTTGGCCGGTTCTGTTCCCCCCGCCCCCGAGTTTGGCCAGACCCTGCCAG
TCGAGGCCGCGCCCGAGGTT

Downstream 100 bases:

>100_bases
CGGGAGCTTCAGCCCCGCCCGCGATAGGGCGCAACGCCCTGATCCGGGACCCAAAGCCCTTCCGGCGCGGGTCCGGTCTG
CCAGAACACGTCGATCGGAA

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAFLAKRRSASAMTLTAPGPNDEQLGEILRIAARVPDHGKLAPWRFIVLTGEAKDAFAERIAPLADSQANPTKATAALRK
LTRPPVCVAVISRHIPGEIPEWEQRQSASAVCHQMLLAAAALGWGANWITDWYSYDPRATALLGLADGEQVAGYLYLGTT
TEQPQERQRPDVAAITSYWSA

Sequences:

>Translated_181_residues
MAFLAKRRSASAMTLTAPGPNDEQLGEILRIAARVPDHGKLAPWRFIVLTGEAKDAFAERIAPLADSQANPTKATAALRK
LTRPPVCVAVISRHIPGEIPEWEQRQSASAVCHQMLLAAAALGWGANWITDWYSYDPRATALLGLADGEQVAGYLYLGTT
TEQPQERQRPDVAAITSYWSA
>Mature_180_residues
AFLAKRRSASAMTLTAPGPNDEQLGEILRIAARVPDHGKLAPWRFIVLTGEAKDAFAERIAPLADSQANPTKATAALRKL
TRPPVCVAVISRHIPGEIPEWEQRQSASAVCHQMLLAAAALGWGANWITDWYSYDPRATALLGLADGEQVAGYLYLGTTT
EQPQERQRPDVAAITSYWSA

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=161, Percent_Identity=33.5403726708075, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 19680; Mature: 19548

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFLAKRRSASAMTLTAPGPNDEQLGEILRIAARVPDHGKLAPWRFIVLTGEAKDAFAER
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHH
IAPLADSQANPTKATAALRKLTRPPVCVAVISRHIPGEIPEWEQRQSASAVCHQMLLAAA
HHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ALGWGANWITDWYSYDPRATALLGLADGEQVAGYLYLGTTTEQPQERQRPDVAAITSYWS
HHCCCCHHHHHHHCCCCCHHEEEECCCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHC
A
C
>Mature Secondary Structure 
AFLAKRRSASAMTLTAPGPNDEQLGEILRIAARVPDHGKLAPWRFIVLTGEAKDAFAER
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHH
IAPLADSQANPTKATAALRKLTRPPVCVAVISRHIPGEIPEWEQRQSASAVCHQMLLAAA
HHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ALGWGANWITDWYSYDPRATALLGLADGEQVAGYLYLGTTTEQPQERQRPDVAAITSYWS
HHCCCCHHHHHHHCCCCCHHEEEECCCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]